RNA–Protein interactions for RNA: ENST00000559685.5

LRRC49-219, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 758 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-219ENST00000559685 DCAF8L2P0C7V8 631 aa11.66□□□□□ -0.54
LRRC49-219ENST00000559685 MICALL2Q8IY33 904 aa11.66□□□□□ -0.54
LRRC49-219ENST00000559685 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
LRRC49-219ENST00000559685 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
LRRC49-219ENST00000559685 ARSIQ5FYB1 569 aa11.62□□□□□ -0.55
LRRC49-219ENST00000559685 LSM11P83369 360 aaKnown RBP eCLIP11.61□□□□□ -0.55
LRRC49-219ENST00000559685 ZNF316A6NFI3 1004 aaPredicted RBP11.6□□□□□ -0.55
LRRC49-219ENST00000559685 PLA2G2EQ9NZK7 142 aa11.59□□□□□ -0.55
LRRC49-219ENST00000559685 RGL2O15211 777 aa11.56□□□□□ -0.56
LRRC49-219ENST00000559685 SOX12O15370 315 aa11.55□□□□□ -0.56
LRRC49-219ENST00000559685 HCSTQ9UBK5 93 aa11.53□□□□□ -0.56
LRRC49-219ENST00000559685 PBX2P40425 430 aa11.52□□□□□ -0.57
LRRC49-219ENST00000559685 KHSRPQ92945 711 aaKnown RBP eCLIP11.52□□□□□ -0.57
LRRC49-219ENST00000559685 PLCB2Q00722 1185 aa11.51□□□□□ -0.57
LRRC49-219ENST00000559685 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
LRRC49-219ENST00000559685 MS4A4AQ96JQ5 239 aa11.49□□□□□ -0.57
LRRC49-219ENST00000559685 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
LRRC49-219ENST00000559685 POTEEQ6S8J3 1075 aa11.41□□□□□ -0.58
LRRC49-219ENST00000559685 RNF25Q96BH1 459 aaPredicted RBP11.41□□□□□ -0.58
LRRC49-219ENST00000559685 AXIN2Q9Y2T1 843 aa11.41□□□□□ -0.58
LRRC49-219ENST00000559685 NUDT7P0C024 238 aa11.4□□□□□ -0.58
LRRC49-219ENST00000559685 BBXQ8WY36 941 aaPredicted RBP11.4□□□□□ -0.58
LRRC49-219ENST00000559685 LHX6Q9UPM6 363 aa11.38□□□□□ -0.59
LRRC49-219ENST00000559685 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
LRRC49-219ENST00000559685 ADGRD1Q6QNK2 874 aa11.35□□□□□ -0.59
LRRC49-219ENST00000559685 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.35□□□□□ -0.59
LRRC49-219ENST00000559685 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.34□□□□□ -0.59
LRRC49-219ENST00000559685 RIOK3O14730 519 aaKnown RBP11.34□□□□□ -0.59
LRRC49-219ENST00000559685 ZFP91Q96JP5 570 aaPredicted RBP11.34□□□□□ -0.59
LRRC49-219ENST00000559685 ARHGAP33O14559 1287 aa11.33□□□□□ -0.6
LRRC49-219ENST00000559685 NLRP6P59044 892 aa11.33□□□□□ -0.6
LRRC49-219ENST00000559685 HAP1P54257 671 aaPredicted RBP11.32□□□□□ -0.6
LRRC49-219ENST00000559685 KIF3CO14782 793 aa11.31□□□□□ -0.6
LRRC49-219ENST00000559685 VGFO15240 615 aaPredicted RBP11.31□□□□□ -0.6
LRRC49-219ENST00000559685 SLC34A2O95436 690 aa11.31□□□□□ -0.6
LRRC49-219ENST00000559685 HS6ST3Q8IZP7 471 aa11.31□□□□□ -0.6
LRRC49-219ENST00000559685 PCDHGA4Q9Y5G9 962 aa11.31□□□□□ -0.6
LRRC49-219ENST00000559685 C2orf72A6NCS6 295 aa11.29□□□□□ -0.6
LRRC49-219ENST00000559685 TK2O00142 265 aa11.28□□□□□ -0.6
LRRC49-219ENST00000559685 PAXIP1Q6ZW49 1069 aaPredicted RBP11.28□□□□□ -0.6
LRRC49-219ENST00000559685 PSDA5PKW4 1024 aaPredicted RBP11.27□□□□□ -0.61
LRRC49-219ENST00000559685 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.61
LRRC49-219ENST00000559685 TAOK2Q9UL54 1235 aa11.26□□□□□ -0.61
LRRC49-219ENST00000559685 HRO43593 1189 aa11.25□□□□□ -0.61
LRRC49-219ENST00000559685 RGS20O76081 388 aa11.24□□□□□ -0.61
LRRC49-219ENST00000559685 CFAP44Q96MT7 982 aa11.24□□□□□ -0.61
LRRC49-219ENST00000559685 SPRYD3Q8NCJ5 442 aa11.21□□□□□ -0.61
LRRC49-219ENST00000559685 KCTD12Q96CX2 325 aaKnown RBP11.21□□□□□ -0.61
LRRC49-219ENST00000559685 DNAJC5Q9H3Z4 198 aa11.21□□□□□ -0.61
LRRC49-219ENST00000559685 STAC3Q96MF2 364 aa11.2□□□□□ -0.62
LRRC49-219ENST00000559685 STK25O00506 426 aa11.19□□□□□ -0.62
LRRC49-219ENST00000559685 IRX2Q9BZI1 471 aaPredicted RBP11.19□□□□□ -0.62
LRRC49-219ENST00000559685 DMRTA1Q5VZB9 504 aa11.18□□□□□ -0.62
LRRC49-219ENST00000559685 PSEN2P49810 448 aa11.16□□□□□ -0.62
LRRC49-219ENST00000559685 NKX1-1Q15270 411 aaPredicted RBP11.16□□□□□ -0.62
LRRC49-219ENST00000559685 IFFO2Q5TF58 517 aa11.16□□□□□ -0.62
LRRC49-219ENST00000559685 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
LRRC49-219ENST00000559685 MFRPQ9BY79 579 aa11.15□□□□□ -0.62
LRRC49-219ENST00000559685 BCL11BQ9C0K0 894 aaPredicted RBP11.15□□□□□ -0.62
LRRC49-219ENST00000559685 VSIG10Q8N0Z9 540 aa11.14□□□□□ -0.63
LRRC49-219ENST00000559685 KDM4FA0A1W2PPD8 638 aa11.13□□□□□ -0.63
LRRC49-219ENST00000559685 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
LRRC49-219ENST00000559685 PTPN5P54829 565 aa11.1□□□□□ -0.63
LRRC49-219ENST00000559685 TSHZ2Q9NRE2 1034 aa11.1□□□□□ -0.63
LRRC49-219ENST00000559685 PPP4R3BQ5MIZ7 849 aa11.09□□□□□ -0.63
LRRC49-219ENST00000559685 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
LRRC49-219ENST00000559685 KDM2AQ9Y2K7 1162 aa11.08□□□□□ -0.64
LRRC49-219ENST00000559685 GTPBP6O43824 516 aaPredicted RBP11.06□□□□□ -0.64
LRRC49-219ENST00000559685 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
LRRC49-219ENST00000559685 A0A0G2JS52 829 aa11.04□□□□□ -0.64
LRRC49-219ENST00000559685 VPS9D1Q9Y2B5 631 aa11.02□□□□□ -0.65
LRRC49-219ENST00000559685 KCNK17Q96T54 332 aa11.01□□□□□ -0.65
LRRC49-219ENST00000559685 TBC1D12O60347 775 aa10.99□□□□□ -0.65
LRRC49-219ENST00000559685 RYDENQ9NUL5 291 aaKnown RBP10.98□□□□□ -0.65
LRRC49-219ENST00000559685 THSD4Q6ZMP0 1018 aa10.97□□□□□ -0.65
LRRC49-219ENST00000559685 SLC4A5Q9BY07 1137 aa10.96□□□□□ -0.65
LRRC49-219ENST00000559685 FOXK1P85037 733 aa10.95□□□□□ -0.66
LRRC49-219ENST00000559685 PLPP6Q8IY26 295 aa10.94□□□□□ -0.66
LRRC49-219ENST00000559685 BHMG1C9JSJ3 638 aaPredicted RBP10.93□□□□□ -0.66
LRRC49-219ENST00000559685 GOLGA8CPA6NN73 597 aa10.92□□□□□ -0.66
LRRC49-219ENST00000559685 Q6ZNB5 142 aa10.91□□□□□ -0.66
LRRC49-219ENST00000559685 WNT2BQ93097 391 aa10.91□□□□□ -0.66
LRRC49-219ENST00000559685 BCANQ96GW7 911 aa10.91□□□□□ -0.66
LRRC49-219ENST00000559685 PPP1R37O75864 691 aa10.9□□□□□ -0.66
LRRC49-219ENST00000559685 BCL2L12Q9HB09 334 aa10.88□□□□□ -0.67
LRRC49-219ENST00000559685 MRPL50Q8N5N7 158 aaKnown RBP10.87□□□□□ -0.67
LRRC49-219ENST00000559685 GPHNQ9NQX3 736 aaPredicted RBP10.87□□□□□ -0.67
LRRC49-219ENST00000559685 DSG2Q14126 1118 aa10.84□□□□□ -0.67
LRRC49-219ENST00000559685 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
LRRC49-219ENST00000559685 PTPREP23469 700 aa10.82□□□□□ -0.68
LRRC49-219ENST00000559685 ZBED2Q9BTP6 218 aa10.82□□□□□ -0.68
LRRC49-219ENST00000559685 ITGBL1O95965 494 aaPredicted RBP10.8□□□□□ -0.68
LRRC49-219ENST00000559685 NBPF3Q9H094 633 aa10.8□□□□□ -0.68
LRRC49-219ENST00000559685 OXER1Q8TDS5 423 aa10.78□□□□□ -0.68
LRRC49-219ENST00000559685 CADPS2Q86UW7 1296 aa10.77□□□□□ -0.69
LRRC49-219ENST00000559685 FOSBP53539 338 aa10.76□□□□□ -0.69
LRRC49-219ENST00000559685 LAPTM4AQ15012 233 aa10.76□□□□□ -0.69
LRRC49-219ENST00000559685 UPF1Q92900 1129 aaKnown RBP eCLIP10.72□□□□□ -0.69
LRRC49-219ENST00000559685 ANKK1Q8NFD2 765 aa10.71□□□□□ -0.69
LRRC49-219ENST00000559685 TRAF7Q6Q0C0 670 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms