RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 CFDP1Q9UEE9 299 aaPredicted RBP26.24■■□□□ 1.79
CHRNA3-206ENST00000559658 ABCA9Q8IUA7 1624 aa26.22■■□□□ 1.79
CHRNA3-206ENST00000559658 MAPKBP1O60336 1514 aa26.21■■□□□ 1.79
CHRNA3-206ENST00000559658 SAMD9LQ8IVG5 1584 aa26.21■■□□□ 1.79
CHRNA3-206ENST00000559658 ZNF777Q9ULD5 760 aaPredicted RBP26.21■■□□□ 1.79
CHRNA3-206ENST00000559658 ARHGAP5Q13017 1502 aa26.19■■□□□ 1.78
CHRNA3-206ENST00000559658 DNMT1P26358 1616 aaKnown RBP26.18■■□□□ 1.78
CHRNA3-206ENST00000559658 PLCH2O75038 1416 aa26.14■■□□□ 1.77
CHRNA3-206ENST00000559658 DAPK1P53355 1430 aa26.13■■□□□ 1.77
CHRNA3-206ENST00000559658 CROCC2H7BZ55 1655 aa26.12■■□□□ 1.77
CHRNA3-206ENST00000559658 ABCC5O15440 1437 aa26.12■■□□□ 1.77
CHRNA3-206ENST00000559658 SYCP2Q9BX26 1530 aa26.1■■□□□ 1.77
CHRNA3-206ENST00000559658 CHIC2Q9UKJ5 165 aa26.08■■□□□ 1.77
CHRNA3-206ENST00000559658 MBD5Q9P267 1494 aa26.06■■□□□ 1.76
CHRNA3-206ENST00000559658 ARAP3Q8WWN8 1544 aa26.06■■□□□ 1.76
CHRNA3-206ENST00000559658 ARHGEF12Q9NZN5 1544 aa26.06■■□□□ 1.76
CHRNA3-206ENST00000559658 DIP2BQ9P265 1576 aa26.05■■□□□ 1.76
CHRNA3-206ENST00000559658 ABCC1P33527 1531 aa26.04■■□□□ 1.76
CHRNA3-206ENST00000559658 HNRNPMP52272 730 aaKnown RBP eCLIP26.03■■□□□ 1.76
CHRNA3-206ENST00000559658 ARHGEF5Q12774 1597 aa26.03■■□□□ 1.76
CHRNA3-206ENST00000559658 FANCAO15360 1455 aa26.02■■□□□ 1.76
CHRNA3-206ENST00000559658 MAP3K4Q9Y6R4 1608 aa26.02■■□□□ 1.76
CHRNA3-206ENST00000559658 RAB3GAP2Q9H2M9 1393 aa26.01■■□□□ 1.75
CHRNA3-206ENST00000559658 GCC2Q8IWJ2 1684 aa26■■□□□ 1.75
CHRNA3-206ENST00000559658 CD109Q6YHK3 1445 aa26■■□□□ 1.75
CHRNA3-206ENST00000559658 ADGBQ8N7X0 1667 aa25.99■■□□□ 1.75
CHRNA3-206ENST00000559658 HFM1A2PYH4 1435 aa25.99■■□□□ 1.75
CHRNA3-206ENST00000559658 SETD5Q9C0A6 1442 aa25.99■■□□□ 1.75
CHRNA3-206ENST00000559658 NAIPQ13075 1403 aa25.99■■□□□ 1.75
CHRNA3-206ENST00000559658 KDM6BO15054 1643 aa25.98■■□□□ 1.75
CHRNA3-206ENST00000559658 AKNAQ7Z591 1439 aa25.98■■□□□ 1.75
CHRNA3-206ENST00000559658 GLI2P10070 1586 aa25.98■■□□□ 1.75
CHRNA3-206ENST00000559658 RRP7BPQ9NSQ0 103 aa25.98■■□□□ 1.75
CHRNA3-206ENST00000559658 EFCAB2Q5VUJ9 269 aa25.97■■□□□ 1.75
CHRNA3-206ENST00000559658 DNAJC5Q9H3Z4 198 aa25.97■■□□□ 1.75
CHRNA3-206ENST00000559658 CCDC141Q6ZP82 1450 aa25.97■■□□□ 1.75
CHRNA3-206ENST00000559658 KIF13AQ9H1H9 1805 aa25.96■■□□□ 1.75
CHRNA3-206ENST00000559658 SHANK2Q9UPX8 1470 aa25.94■■□□□ 1.74
CHRNA3-206ENST00000559658 KIAA1107Q9UPP5 1409 aa25.94■■□□□ 1.74
CHRNA3-206ENST00000559658 PLEKHH2Q8IVE3 1493 aa25.93■■□□□ 1.74
CHRNA3-206ENST00000559658 C9orf84Q5VXU9 1444 aa25.93■■□□□ 1.74
CHRNA3-206ENST00000559658 TRAPPC8Q9Y2L5 1435 aa25.93■■□□□ 1.74
CHRNA3-206ENST00000559658 ADGRL2O95490 1459 aa25.91■■□□□ 1.74
CHRNA3-206ENST00000559658 TSPOAP1O95153 1857 aa25.91■■□□□ 1.74
CHRNA3-206ENST00000559658 PPRC1Q5VV67 1664 aaKnown RBP25.91■■□□□ 1.74
CHRNA3-206ENST00000559658 ADGRL1O94910 1474 aa25.9■■□□□ 1.74
CHRNA3-206ENST00000559658 FAM69CQ0P6D2 419 aa25.9■■□□□ 1.74
CHRNA3-206ENST00000559658 ROCK1Q13464 1354 aa25.9■■□□□ 1.74
CHRNA3-206ENST00000559658 NCOA1Q15788 1441 aa25.88■■□□□ 1.73
CHRNA3-206ENST00000559658 CFAP74Q9C0B2 1584 aa25.87■■□□□ 1.73
CHRNA3-206ENST00000559658 MAST1Q9Y2H9 1570 aa25.86■■□□□ 1.73
CHRNA3-206ENST00000559658 CCER1Q8TC90 406 aaPredicted RBP25.86■■□□□ 1.73
CHRNA3-206ENST00000559658 SCAPERQ9BY12 1400 aa25.85■■□□□ 1.73
CHRNA3-206ENST00000559658 DHX57Q6P158 1386 aaKnown RBP25.84■■□□□ 1.73
CHRNA3-206ENST00000559658 AFAP1Q8N556 730 aa25.82■■□□□ 1.72
CHRNA3-206ENST00000559658 TSPY4P0CV99 314 aa25.81■■□□□ 1.72
CHRNA3-206ENST00000559658 TSPY10P0CW01 314 aa25.81■■□□□ 1.72
CHRNA3-206ENST00000559658 ANKRD30AQ9BXX3 1397 aa25.8■■□□□ 1.72
CHRNA3-206ENST00000559658 ZFYVE16Q7Z3T8 1539 aa25.8■■□□□ 1.72
CHRNA3-206ENST00000559658 NEO1Q92859 1461 aa25.79■■□□□ 1.72
CHRNA3-206ENST00000559658 HRCP23327 699 aa25.79■■□□□ 1.72
CHRNA3-206ENST00000559658 PLXNC1O60486 1568 aa25.78■■□□□ 1.72
CHRNA3-206ENST00000559658 INO80Q9ULG1 1556 aaPredicted RBP25.78■■□□□ 1.72
CHRNA3-206ENST00000559658 RSPH4AQ5TD94 716 aa25.77■■□□□ 1.72
CHRNA3-206ENST00000559658 KIF15Q9NS87 1388 aa25.76■■□□□ 1.71
CHRNA3-206ENST00000559658 POGZQ7Z3K3 1410 aa25.75■■□□□ 1.71
CHRNA3-206ENST00000559658 ATP7AQ04656 1500 aa25.73■■□□□ 1.71
CHRNA3-206ENST00000559658 RICTORQ6R327 1708 aa25.72■■□□□ 1.71
CHRNA3-206ENST00000559658 KDM5CP41229 1560 aa25.72■■□□□ 1.71
CHRNA3-206ENST00000559658 ANKRD50Q9ULJ7 1429 aa25.71■■□□□ 1.71
CHRNA3-206ENST00000559658 ZNF518AQ6AHZ1 1483 aa25.71■■□□□ 1.71
CHRNA3-206ENST00000559658 FRMPD1Q5SYB0 1578 aa25.71■■□□□ 1.71
CHRNA3-206ENST00000559658 KIDINS220Q9ULH0 1771 aa25.71■■□□□ 1.71
CHRNA3-206ENST00000559658 SPAG9O60271 1321 aaKnown RBP25.7■■□□□ 1.71
CHRNA3-206ENST00000559658 RAPGEF3O95398 923 aa25.68■■□□□ 1.7
CHRNA3-206ENST00000559658 DENND4BO75064 1496 aaPredicted RBP25.66■■□□□ 1.7
CHRNA3-206ENST00000559658 TEX14Q8IWB6 1497 aa25.66■■□□□ 1.7
CHRNA3-206ENST00000559658 RTEL1-TNFRSF6BF6WH68 1400 aa25.65■■□□□ 1.7
CHRNA3-206ENST00000559658 HECW2Q9P2P5 1572 aa25.65■■□□□ 1.7
CHRNA3-206ENST00000559658 DUOX2Q9NRD8 1548 aa25.63■■□□□ 1.69
CHRNA3-206ENST00000559658 TRIM52Q96A61 297 aa25.62■■□□□ 1.69
CHRNA3-206ENST00000559658 ABCA6Q8N139 1617 aa25.62■■□□□ 1.69
CHRNA3-206ENST00000559658 COL17A1Q9UMD9 1497 aaPredicted RBP25.59■■□□□ 1.69
CHRNA3-206ENST00000559658 PZPP20742 1482 aa25.58■■□□□ 1.69
CHRNA3-206ENST00000559658 MLH3Q9UHC1 1453 aa25.58■■□□□ 1.68
CHRNA3-206ENST00000559658 MYT1LQ9UL68 1186 aa25.57■■□□□ 1.68
CHRNA3-206ENST00000559658 ERBINQ96RT1 1412 aa25.56■■□□□ 1.68
CHRNA3-206ENST00000559658 UNC13BO14795 1591 aa25.56■■□□□ 1.68
CHRNA3-206ENST00000559658 DIP2CQ9Y2E4 1556 aa25.54■■□□□ 1.68
CHRNA3-206ENST00000559658 YEATS2Q9ULM3 1422 aa25.53■■□□□ 1.68
CHRNA3-206ENST00000559658 TRHP20396 242 aaPredicted RBP25.53■■□□□ 1.68
CHRNA3-206ENST00000559658 ZMYM4Q5VZL5 1548 aa25.53■■□□□ 1.68
CHRNA3-206ENST00000559658 KDM5DQ9BY66 1539 aa25.52■■□□□ 1.68
CHRNA3-206ENST00000559658 FOXD1Q16676 465 aa25.5■■□□□ 1.67
CHRNA3-206ENST00000559658 MPHOSPH9Q99550 1183 aa25.5■■□□□ 1.67
CHRNA3-206ENST00000559658 MAGI2Q86UL8 1455 aa25.48■■□□□ 1.67
CHRNA3-206ENST00000559658 NUP155O75694 1391 aa25.48■■□□□ 1.67
CHRNA3-206ENST00000559658 A2MP01023 1474 aa25.48■■□□□ 1.67
CHRNA3-206ENST00000559658 DEPDC5O75140 1603 aa25.47■■□□□ 1.67
CHRNA3-206ENST00000559658 CLSPNQ9HAW4 1339 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms