RNA–Protein interactions for RNA: ENST00000559476.2

ZEB1-215, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 1,205 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-215ENST00000559476 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
ZEB1-215ENST00000559476 TMEM92Q6UXU6 159 aa10.93□□□□□ -0.66
ZEB1-215ENST00000559476 HS6ST3Q8IZP7 471 aa10.9□□□□□ -0.66
ZEB1-215ENST00000559476 FAM205CA6NFA0 338 aa10.88□□□□□ -0.67
ZEB1-215ENST00000559476 HS3ST6Q96QI5 342 aa10.88□□□□□ -0.67
ZEB1-215ENST00000559476 KIF3CO14782 793 aa10.82□□□□□ -0.68
ZEB1-215ENST00000559476 DNAJC5Q9H3Z4 198 aa10.82□□□□□ -0.68
ZEB1-215ENST00000559476 RYDENQ9NUL5 291 aaKnown RBP10.82□□□□□ -0.68
ZEB1-215ENST00000559476 ERBB3P21860 1342 aa10.82□□□□□ -0.68
ZEB1-215ENST00000559476 CHGAP10645 457 aaKnown RBP10.81□□□□□ -0.68
ZEB1-215ENST00000559476 GPR153Q6NV75 609 aa10.8□□□□□ -0.68
ZEB1-215ENST00000559476 POTEB3A0JP26 581 aa10.79□□□□□ -0.68
ZEB1-215ENST00000559476 C2orf72A6NCS6 295 aa10.79□□□□□ -0.68
ZEB1-215ENST00000559476 POTEBQ6S5H4 581 aa10.79□□□□□ -0.68
ZEB1-215ENST00000559476 TMC2Q8TDI7 906 aa10.79□□□□□ -0.68
ZEB1-215ENST00000559476 SPNS2Q8IVW8 549 aa10.77□□□□□ -0.69
ZEB1-215ENST00000559476 PPP1R37O75864 691 aa10.76□□□□□ -0.69
ZEB1-215ENST00000559476 SLC34A2O95436 690 aa10.74□□□□□ -0.69
ZEB1-215ENST00000559476 KRTAP3-3Q9BYR6 98 aa10.74□□□□□ -0.69
ZEB1-215ENST00000559476 KRTAP3-2Q9BYR7 98 aa10.74□□□□□ -0.69
ZEB1-215ENST00000559476 VARS2Q5ST30 1063 aaKnown RBP10.73□□□□□ -0.69
ZEB1-215ENST00000559476 ARSIQ5FYB1 569 aa10.72□□□□□ -0.69
ZEB1-215ENST00000559476 MMRN1Q13201 1228 aa10.71□□□□□ -0.69
ZEB1-215ENST00000559476 ZNF687Q8N1G0 1237 aa10.71□□□□□ -0.69
ZEB1-215ENST00000559476 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
ZEB1-215ENST00000559476 DCAF8L2P0C7V8 631 aa10.69□□□□□ -0.7
ZEB1-215ENST00000559476 AMER1Q5JTC6 1135 aaPredicted RBP10.68□□□□□ -0.7
ZEB1-215ENST00000559476 NKX1-1Q15270 411 aaPredicted RBP10.67□□□□□ -0.7
ZEB1-215ENST00000559476 FOXK1P85037 733 aa10.66□□□□□ -0.7
ZEB1-215ENST00000559476 GPHNQ9NQX3 736 aaPredicted RBP10.66□□□□□ -0.7
ZEB1-215ENST00000559476 PCDHGA4Q9Y5G9 962 aa10.65□□□□□ -0.7
ZEB1-215ENST00000559476 CCDC180Q9P1Z9 1646 aa10.63□□□□□ -0.71
ZEB1-215ENST00000559476 NUDT7P0C024 238 aa10.62□□□□□ -0.71
ZEB1-215ENST00000559476 PTCD2Q8WV60 388 aaKnown RBP10.62□□□□□ -0.71
ZEB1-215ENST00000559476 KHSRPQ92945 711 aaKnown RBP eCLIP10.62□□□□□ -0.716e-7■■■■□ 21.8
ZEB1-215ENST00000559476 PSDA5PKW4 1024 aaPredicted RBP10.61□□□□□ -0.71
ZEB1-215ENST00000559476 PLPP6Q8IY26 295 aa10.61□□□□□ -0.71
ZEB1-215ENST00000559476 TBC1D12O60347 775 aa10.59□□□□□ -0.71
ZEB1-215ENST00000559476 PBX2P40425 430 aa10.59□□□□□ -0.71
ZEB1-215ENST00000559476 PTGER2P43116 358 aa10.59□□□□□ -0.71
ZEB1-215ENST00000559476 DSG2Q14126 1118 aa10.57□□□□□ -0.72
ZEB1-215ENST00000559476 LHX6Q9UPM6 363 aa10.57□□□□□ -0.72
ZEB1-215ENST00000559476 GTPBP6O43824 516 aaPredicted RBP10.56□□□□□ -0.72
ZEB1-215ENST00000559476 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
ZEB1-215ENST00000559476 PDE4AP27815 886 aa10.54□□□□□ -0.72
ZEB1-215ENST00000559476 KDM4FA0A1W2PPD8 638 aa10.52□□□□□ -0.73
ZEB1-215ENST00000559476 LSM11P83369 360 aaKnown RBP eCLIP10.51□□□□□ -0.73
ZEB1-215ENST00000559476 PPP1R15BQ5SWA1 713 aa10.5□□□□□ -0.73
ZEB1-215ENST00000559476 ANKRD13DQ6ZTN6 518 aa10.49□□□□□ -0.73
ZEB1-215ENST00000559476 RNF166Q96A37 237 aaPredicted RBP10.49□□□□□ -0.73
ZEB1-215ENST00000559476 RTN4Q9NQC3 1192 aaKnown RBP10.49□□□□□ -0.73
ZEB1-215ENST00000559476 MYT1LQ9UL68 1186 aa10.49□□□□□ -0.73
ZEB1-215ENST00000559476 OXER1Q8TDS5 423 aa10.48□□□□□ -0.73
ZEB1-215ENST00000559476 NCKAP5LQ9HCH0 1330 aa10.47□□□□□ -0.73
ZEB1-215ENST00000559476 ARHGAP33O14559 1287 aa10.46□□□□□ -0.73
ZEB1-215ENST00000559476 PPP4R3BQ5MIZ7 849 aa10.46□□□□□ -0.73
ZEB1-215ENST00000559476 BBXQ8WY36 941 aaPredicted RBP10.45□□□□□ -0.74
ZEB1-215ENST00000559476 DDX27Q96GQ7 796 aaKnown RBP10.44□□□□□ -0.74
ZEB1-215ENST00000559476 MFSD10Q14728 455 aa10.42□□□□□ -0.74
ZEB1-215ENST00000559476 POTEEQ6S8J3 1075 aa10.42□□□□□ -0.74
ZEB1-215ENST00000559476 LARP6Q9BRS8 491 aaKnown RBP10.42□□□□□ -0.74
ZEB1-215ENST00000559476 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
ZEB1-215ENST00000559476 KCNH8Q96L42 1107 aa10.41□□□□□ -0.74
ZEB1-215ENST00000559476 UPF1Q92900 1129 aaKnown RBP eCLIP10.4□□□□□ -0.74
ZEB1-215ENST00000559476 AXIN2Q9Y2T1 843 aa10.4□□□□□ -0.74
ZEB1-215ENST00000559476 TK2O00142 265 aa10.39□□□□□ -0.75
ZEB1-215ENST00000559476 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
ZEB1-215ENST00000559476 ANO8Q9HCE9 1232 aaPredicted RBP10.37□□□□□ -0.75
ZEB1-215ENST00000559476 ZNF454Q8N9F8 522 aa10.34□□□□□ -0.75
ZEB1-215ENST00000559476 SPRYD3Q8NCJ5 442 aa10.34□□□□□ -0.75
ZEB1-215ENST00000559476 MAP3K9P80192 1104 aa10.33□□□□□ -0.76
ZEB1-215ENST00000559476 EVI5O60447 810 aa10.32□□□□□ -0.76
ZEB1-215ENST00000559476 FOSBP53539 338 aa10.32□□□□□ -0.76
ZEB1-215ENST00000559476 JPH4Q96JJ6 628 aa10.32□□□□□ -0.76
ZEB1-215ENST00000559476 BCL2L12Q9HB09 334 aa10.32□□□□□ -0.76
ZEB1-215ENST00000559476 PSEN2P49810 448 aa10.31□□□□□ -0.76
ZEB1-215ENST00000559476 DMRTA1Q5VZB9 504 aa10.3□□□□□ -0.76
ZEB1-215ENST00000559476 CADPS2Q86UW7 1296 aa10.3□□□□□ -0.76
ZEB1-215ENST00000559476 KCNK17Q96T54 332 aa10.3□□□□□ -0.76
ZEB1-215ENST00000559476 SLC4A5Q9BY07 1137 aa10.29□□□□□ -0.76
ZEB1-215ENST00000559476 HRO43593 1189 aa10.28□□□□□ -0.76
ZEB1-215ENST00000559476 PTPREP23469 700 aa10.28□□□□□ -0.76
ZEB1-215ENST00000559476 STAC3Q96MF2 364 aa10.28□□□□□ -0.76
ZEB1-215ENST00000559476 ZDHHC16Q969W1 377 aa10.27□□□□□ -0.77
ZEB1-215ENST00000559476 EMILIN3Q9NT22 766 aa10.27□□□□□ -0.77
ZEB1-215ENST00000559476 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
ZEB1-215ENST00000559476 HCSTQ9UBK5 93 aa10.25□□□□□ -0.77
ZEB1-215ENST00000559476 VPS9D1Q9Y2B5 631 aa10.24□□□□□ -0.77
ZEB1-215ENST00000559476 PAXIP1Q6ZW49 1069 aaPredicted RBP10.23□□□□□ -0.77
ZEB1-215ENST00000559476 FBXW7Q969H0 707 aa10.22□□□□□ -0.77
ZEB1-215ENST00000559476 CFAP44Q96MT7 982 aa10.21□□□□□ -0.77
ZEB1-215ENST00000559476 PHF14O94880 888 aa10.2□□□□□ -0.78
ZEB1-215ENST00000559476 TYW1BQ6NUM6 668 aa10.2□□□□□ -0.78
ZEB1-215ENST00000559476 ADAM33Q9BZ11 813 aa10.19□□□□□ -0.78
ZEB1-215ENST00000559476 PCDHGA10Q9Y5H3 936 aa10.19□□□□□ -0.78
ZEB1-215ENST00000559476 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
ZEB1-215ENST00000559476 EPAS1Q99814 870 aa10.17□□□□□ -0.78
ZEB1-215ENST00000559476 PPP1R3GB7ZBB8 358 aa10.16□□□□□ -0.78
ZEB1-215ENST00000559476 BHMG1C9JSJ3 638 aaPredicted RBP10.15□□□□□ -0.78
ZEB1-215ENST00000559476 DPYSL4O14531 572 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms