RNA–Protein interactions for RNA: ENST00000559154.5

PSMA4-211, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-211ENST00000559154 ZSWIM6Q9HCJ5 1215 aa17.22■□□□□ 0.35
PSMA4-211ENST00000559154 HOXB1P14653 301 aaPredicted RBP17.21■□□□□ 0.35
PSMA4-211ENST00000559154 FAM205CA6NFA0 338 aa17.18■□□□□ 0.34
PSMA4-211ENST00000559154 HS3ST6Q96QI5 342 aa17.17■□□□□ 0.34
PSMA4-211ENST00000559154 CHGAP10645 457 aaKnown RBP17.15■□□□□ 0.34
PSMA4-211ENST00000559154 TMC2Q8TDI7 906 aa17.09■□□□□ 0.33
PSMA4-211ENST00000559154 ERBB3P21860 1342 aa17.09■□□□□ 0.33
PSMA4-211ENST00000559154 RYDENQ9NUL5 291 aaKnown RBP17.08■□□□□ 0.32
PSMA4-211ENST00000559154 C2orf72A6NCS6 295 aa17.06■□□□□ 0.32
PSMA4-211ENST00000559154 KIF3CO14782 793 aa17.06■□□□□ 0.32
PSMA4-211ENST00000559154 DNAJC5Q9H3Z4 198 aa17.05■□□□□ 0.32
PSMA4-211ENST00000559154 PPP1R37O75864 691 aa17.03■□□□□ 0.32
PSMA4-211ENST00000559154 GPR153Q6NV75 609 aa17.03■□□□□ 0.32
PSMA4-211ENST00000559154 POTEB3A0JP26 581 aa17.02■□□□□ 0.32
PSMA4-211ENST00000559154 POTEBQ6S5H4 581 aa17.02■□□□□ 0.32
PSMA4-211ENST00000559154 ARSIQ5FYB1 569 aa16.96■□□□□ 0.31
PSMA4-211ENST00000559154 VARS2Q5ST30 1063 aaKnown RBP16.96■□□□□ 0.31
PSMA4-211ENST00000559154 SPNS2Q8IVW8 549 aa16.96■□□□□ 0.31
PSMA4-211ENST00000559154 KRTAP3-3Q9BYR6 98 aa16.94■□□□□ 0.3
PSMA4-211ENST00000559154 KRTAP3-2Q9BYR7 98 aa16.94■□□□□ 0.3
PSMA4-211ENST00000559154 SLC34A2O95436 690 aa16.93■□□□□ 0.3
PSMA4-211ENST00000559154 DCAF8L2P0C7V8 631 aa16.9■□□□□ 0.3
PSMA4-211ENST00000559154 NKX1-1Q15270 411 aaPredicted RBP16.89■□□□□ 0.29
PSMA4-211ENST00000559154 MMRN1Q13201 1228 aa16.87■□□□□ 0.29
PSMA4-211ENST00000559154 ZNF687Q8N1G0 1237 aa16.86■□□□□ 0.29
PSMA4-211ENST00000559154 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
PSMA4-211ENST00000559154 GPHNQ9NQX3 736 aaPredicted RBP16.84■□□□□ 0.29
PSMA4-211ENST00000559154 FOXK1P85037 733 aa16.83■□□□□ 0.28
PSMA4-211ENST00000559154 PCDHGA4Q9Y5G9 962 aa16.83■□□□□ 0.28
PSMA4-211ENST00000559154 KHSRPQ92945 711 aaKnown RBP eCLIP16.82■□□□□ 0.28
PSMA4-211ENST00000559154 NUDT7P0C024 238 aa16.8■□□□□ 0.28
PSMA4-211ENST00000559154 PLPP6Q8IY26 295 aa16.78■□□□□ 0.28
PSMA4-211ENST00000559154 PTCD2Q8WV60 388 aaKnown RBP16.73■□□□□ 0.27
PSMA4-211ENST00000559154 TBC1D12O60347 775 aa16.72■□□□□ 0.27
PSMA4-211ENST00000559154 DSG2Q14126 1118 aa16.72■□□□□ 0.27
PSMA4-211ENST00000559154 PSDA5PKW4 1024 aaPredicted RBP16.71■□□□□ 0.27
PSMA4-211ENST00000559154 GTPBP6O43824 516 aaPredicted RBP16.7■□□□□ 0.26
PSMA4-211ENST00000559154 LHX6Q9UPM6 363 aa16.7■□□□□ 0.26
PSMA4-211ENST00000559154 PBX2P40425 430 aa16.68■□□□□ 0.26
PSMA4-211ENST00000559154 CRISPLD2Q9H0B8 497 aa16.67■□□□□ 0.26
PSMA4-211ENST00000559154 PDE4AP27815 886 aa16.66■□□□□ 0.26
PSMA4-211ENST00000559154 PTGER2P43116 358 aa16.65■□□□□ 0.26
PSMA4-211ENST00000559154 PPP1R15BQ5SWA1 713 aa16.62■□□□□ 0.25
PSMA4-211ENST00000559154 AMER1Q5JTC6 1135 aaPredicted RBP16.6■□□□□ 0.25
PSMA4-211ENST00000559154 LSM11P83369 360 aaKnown RBP eCLIP16.59■□□□□ 0.25
PSMA4-211ENST00000559154 ANKRD13DQ6ZTN6 518 aa16.58■□□□□ 0.24
PSMA4-211ENST00000559154 KDM4FA0A1W2PPD8 638 aa16.56■□□□□ 0.24
PSMA4-211ENST00000559154 RNF166Q96A37 237 aaPredicted RBP16.56■□□□□ 0.24
PSMA4-211ENST00000559154 MYT1LQ9UL68 1186 aa16.56■□□□□ 0.24
PSMA4-211ENST00000559154 NCKAP5LQ9HCH0 1330 aa16.55■□□□□ 0.24
PSMA4-211ENST00000559154 OXER1Q8TDS5 423 aa16.54■□□□□ 0.24
PSMA4-211ENST00000559154 PPP4R3BQ5MIZ7 849 aa16.53■□□□□ 0.24
PSMA4-211ENST00000559154 DDX27Q96GQ7 796 aaKnown RBP16.53■□□□□ 0.24
PSMA4-211ENST00000559154 UPF1Q92900 1129 aaKnown RBP eCLIP16.52■□□□□ 0.24
PSMA4-211ENST00000559154 LARP6Q9BRS8 491 aaKnown RBP16.51■□□□□ 0.23
PSMA4-211ENST00000559154 ARHGAP33O14559 1287 aa16.49■□□□□ 0.23
PSMA4-211ENST00000559154 BBXQ8WY36 941 aaPredicted RBP16.49■□□□□ 0.23
PSMA4-211ENST00000559154 AXIN2Q9Y2T1 843 aa16.47■□□□□ 0.23
PSMA4-211ENST00000559154 MFSD10Q14728 455 aa16.46■□□□□ 0.23
PSMA4-211ENST00000559154 KCNH8Q96L42 1107 aa16.46■□□□□ 0.23
PSMA4-211ENST00000559154 POTEEQ6S8J3 1075 aa16.44■□□□□ 0.22
PSMA4-211ENST00000559154 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.38■□□□□ 0.21
PSMA4-211ENST00000559154 ADGRD1Q6QNK2 874 aa16.37■□□□□ 0.21
PSMA4-211ENST00000559154 TK2O00142 265 aa16.36■□□□□ 0.21
PSMA4-211ENST00000559154 MAP3K9P80192 1104 aa16.36■□□□□ 0.21
PSMA4-211ENST00000559154 ZNF454Q8N9F8 522 aa16.36■□□□□ 0.21
PSMA4-211ENST00000559154 EVI5O60447 810 aa16.34■□□□□ 0.21
PSMA4-211ENST00000559154 RTN4Q9NQC3 1192 aaKnown RBP16.34■□□□□ 0.21
PSMA4-211ENST00000559154 CADPS2Q86UW7 1296 aa16.33■□□□□ 0.2
PSMA4-211ENST00000559154 PSEN2P49810 448 aa16.32■□□□□ 0.2
PSMA4-211ENST00000559154 ANO8Q9HCE9 1232 aaPredicted RBP16.32■□□□□ 0.2
PSMA4-211ENST00000559154 SPRYD3Q8NCJ5 442 aa16.31■□□□□ 0.2
PSMA4-211ENST00000559154 KCNK17Q96T54 332 aa16.31■□□□□ 0.2
PSMA4-211ENST00000559154 FOSBP53539 338 aa16.3■□□□□ 0.2
PSMA4-211ENST00000559154 JPH4Q96JJ6 628 aa16.3■□□□□ 0.2
PSMA4-211ENST00000559154 BCL2L12Q9HB09 334 aa16.29■□□□□ 0.2
PSMA4-211ENST00000559154 DMRTA1Q5VZB9 504 aa16.28■□□□□ 0.2
PSMA4-211ENST00000559154 STAC3Q96MF2 364 aa16.27■□□□□ 0.2
PSMA4-211ENST00000559154 EMILIN3Q9NT22 766 aa16.26■□□□□ 0.19
PSMA4-211ENST00000559154 PTPREP23469 700 aa16.25■□□□□ 0.19
PSMA4-211ENST00000559154 ZDHHC16Q969W1 377 aa16.22■□□□□ 0.19
PSMA4-211ENST00000559154 HRO43593 1189 aa16.21■□□□□ 0.19
PSMA4-211ENST00000559154 CAMK2BQ13554 666 aa16.21■□□□□ 0.19
PSMA4-211ENST00000559154 SLC4A5Q9BY07 1137 aa16.19■□□□□ 0.18
PSMA4-211ENST00000559154 HCSTQ9UBK5 93 aa16.17■□□□□ 0.18
PSMA4-211ENST00000559154 VPS9D1Q9Y2B5 631 aa16.15■□□□□ 0.18
PSMA4-211ENST00000559154 PAXIP1Q6ZW49 1069 aaPredicted RBP16.13■□□□□ 0.17
PSMA4-211ENST00000559154 FBXW7Q969H0 707 aa16.13■□□□□ 0.17
PSMA4-211ENST00000559154 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
PSMA4-211ENST00000559154 ADAM33Q9BZ11 813 aa16.13■□□□□ 0.17
PSMA4-211ENST00000559154 PHF14O94880 888 aa16.12■□□□□ 0.17
PSMA4-211ENST00000559154 DPYSL4O14531 572 aa16.1■□□□□ 0.17
PSMA4-211ENST00000559154 TYW1BQ6NUM6 668 aa16.1■□□□□ 0.17
PSMA4-211ENST00000559154 ZBED2Q9BTP6 218 aa16.09■□□□□ 0.17
PSMA4-211ENST00000559154 PCDHGA10Q9Y5H3 936 aa16.09■□□□□ 0.17
PSMA4-211ENST00000559154 EPAS1Q99814 870 aa16.07■□□□□ 0.16
PSMA4-211ENST00000559154 PPP1R3GB7ZBB8 358 aa16.05■□□□□ 0.16
PSMA4-211ENST00000559154 KCTD12Q96CX2 325 aaKnown RBP16.05■□□□□ 0.16
PSMA4-211ENST00000559154 WDR70Q9NW82 654 aa16.05■□□□□ 0.16
PSMA4-211ENST00000559154 NBPF3Q9H094 633 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms