RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 IRX5P78411 483 aaPredicted RBP23.55■■□□□ 1.36
CASC4-208ENST00000559151 ASTLQ6HA08 431 aaPredicted RBP23.55■■□□□ 1.36
CASC4-208ENST00000559151 DSG2Q14126 1118 aa23.51■■□□□ 1.35
CASC4-208ENST00000559151 SMYD5Q6GMV2 418 aa23.49■■□□□ 1.35
CASC4-208ENST00000559151 OCEL1Q9H607 264 aa23.49■■□□□ 1.35
CASC4-208ENST00000559151 IER5LQ5T953 404 aa23.48■■□□□ 1.35
CASC4-208ENST00000559151 TMC2Q8TDI7 906 aa23.47■■□□□ 1.35
CASC4-208ENST00000559151 EMILIN3Q9NT22 766 aa23.45■■□□□ 1.34
CASC4-208ENST00000559151 BOLA1Q9Y3E2 137 aa23.45■■□□□ 1.34
CASC4-208ENST00000559151 TMEM121BQ9BXQ6 578 aaPredicted RBP23.43■■□□□ 1.34
CASC4-208ENST00000559151 DPYSL4O14531 572 aa23.41■■□□□ 1.34
CASC4-208ENST00000559151 MLLT3P42568 568 aaPredicted RBP23.4■■□□□ 1.34
CASC4-208ENST00000559151 FOXK1P85037 733 aa23.4■■□□□ 1.34
CASC4-208ENST00000559151 PLCG2P16885 1265 aa23.38■■□□□ 1.33
CASC4-208ENST00000559151 G3V3G9 751 aa23.36■■□□□ 1.33
CASC4-208ENST00000559151 GABBR2O75899 941 aa23.36■■□□□ 1.33
CASC4-208ENST00000559151 C2orf72A6NCS6 295 aa23.34■■□□□ 1.33
CASC4-208ENST00000559151 PLPP6Q8IY26 295 aa23.32■■□□□ 1.32
CASC4-208ENST00000559151 SLC24A3Q9HC58 644 aa23.32■■□□□ 1.32
CASC4-208ENST00000559151 KIF3CO14782 793 aa23.31■■□□□ 1.32
CASC4-208ENST00000559151 RBM26Q5T8P6 1007 aaKnown RBP23.29■■□□□ 1.32
CASC4-208ENST00000559151 ZMYND10O75800 440 aa23.28■■□□□ 1.32
CASC4-208ENST00000559151 PDIA6Q15084 440 aa23.28■■□□□ 1.32
CASC4-208ENST00000559151 PELP1Q8IZL8 1130 aaKnown RBP23.27■■□□□ 1.32
CASC4-208ENST00000559151 SPDYE16A6NNV3 312 aaPredicted RBP23.25■■□□□ 1.31
CASC4-208ENST00000559151 BRPF1P55201 1214 aaPredicted RBP23.24■■□□□ 1.31
CASC4-208ENST00000559151 L3MBTL3Q96JM7 780 aaPredicted RBP23.24■■□□□ 1.31
CASC4-208ENST00000559151 TMEM132AQ24JP5 1023 aa23.23■■□□□ 1.31
CASC4-208ENST00000559151 DCBLD2Q96PD2 775 aa23.21■■□□□ 1.31
CASC4-208ENST00000559151 COLQQ9Y215 455 aaPredicted RBP23.21■■□□□ 1.31
CASC4-208ENST00000559151 SEC24BO95487 1268 aa23.2■■□□□ 1.3
CASC4-208ENST00000559151 TMEM92Q6UXU6 159 aa23.19■■□□□ 1.3
CASC4-208ENST00000559151 GPIHBP1Q8IV16 184 aa23.19■■□□□ 1.3
CASC4-208ENST00000559151 BARGINQ6ZT62 677 aa23.15■■□□□ 1.3
CASC4-208ENST00000559151 MAP3K9P80192 1104 aa23.1■■□□□ 1.29
CASC4-208ENST00000559151 NEUROD2Q15784 382 aa23.1■■□□□ 1.29
CASC4-208ENST00000559151 GTF3C3Q9Y5Q9 886 aa23.1■■□□□ 1.29
CASC4-208ENST00000559151 SLC39A7Q92504 469 aa23.09■■□□□ 1.29
CASC4-208ENST00000559151 UPF1Q92900 1129 aaKnown RBP eCLIP23.09■■□□□ 1.29
CASC4-208ENST00000559151 POTEFA5A3E0 1075 aa23.07■■□□□ 1.28
CASC4-208ENST00000559151 GRXCR2A6NFK2 248 aa23■■□□□ 1.27
CASC4-208ENST00000559151 C7P10643 843 aa23■■□□□ 1.27
CASC4-208ENST00000559151 OXER1Q8TDS5 423 aa23■■□□□ 1.27
CASC4-208ENST00000559151 POTEHQ6S545 545 aa22.98■■□□□ 1.27
CASC4-208ENST00000559151 METRNQ9UJH8 293 aa22.98■■□□□ 1.27
CASC4-208ENST00000559151 KRI1Q8N9T8 703 aaKnown RBP22.96■■□□□ 1.27
CASC4-208ENST00000559151 AK7Q96M32 723 aa22.94■■□□□ 1.26
CASC4-208ENST00000559151 GPR37O15354 613 aa22.92■■□□□ 1.26
CASC4-208ENST00000559151 POTEIP0CG38 1075 aa22.92■■□□□ 1.26
CASC4-208ENST00000559151 C3orf67Q6ZVT6 689 aa22.89■■□□□ 1.25
CASC4-208ENST00000559151 TIMELESSQ9UNS1 1208 aa22.89■■□□□ 1.25
CASC4-208ENST00000559151 OSBPP22059 807 aa22.86■■□□□ 1.25
CASC4-208ENST00000559151 DDX12PQ92771 950 aa22.86■■□□□ 1.25
CASC4-208ENST00000559151 NUTM2FA1L443 756 aa22.84■■□□□ 1.25
CASC4-208ENST00000559151 TBC1D12O60347 775 aa22.84■■□□□ 1.25
CASC4-208ENST00000559151 PTGER2P43116 358 aa22.84■■□□□ 1.25
CASC4-208ENST00000559151 EVI5O60447 810 aa22.83■■□□□ 1.25
CASC4-208ENST00000559151 GPBP1L1Q9HC44 474 aaPredicted RBP22.78■■□□□ 1.24
CASC4-208ENST00000559151 TRIM66O15016 1216 aa22.76■■□□□ 1.23
CASC4-208ENST00000559151 PTCD2Q8WV60 388 aaKnown RBP22.76■■□□□ 1.23
CASC4-208ENST00000559151 PRIM1P49642 420 aaKnown RBP22.73■■□□□ 1.23
CASC4-208ENST00000559151 ZNF316A6NFI3 1004 aaPredicted RBP22.69■■□□□ 1.22
CASC4-208ENST00000559151 PDE4DQ08499 809 aa22.69■■□□□ 1.22
CASC4-208ENST00000559151 SLC34A2O95436 690 aa22.68■■□□□ 1.22
CASC4-208ENST00000559151 SP7Q8TDD2 431 aaPredicted RBP22.68■■□□□ 1.22
CASC4-208ENST00000559151 MINK1Q8N4C8 1332 aaPredicted RBP22.65■■□□□ 1.22
CASC4-208ENST00000559151 GNPATO15228 680 aa22.65■■□□□ 1.22
CASC4-208ENST00000559151 MAP2K5Q13163 448 aa22.65■■□□□ 1.22
CASC4-208ENST00000559151 FCHSD2O94868 740 aa22.64■■□□□ 1.21
CASC4-208ENST00000559151 KDM4CQ9H3R0 1056 aa22.64■■□□□ 1.21
CASC4-208ENST00000559151 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.64■■□□□ 1.21
CASC4-208ENST00000559151 CCDC102AQ96A19 550 aa22.62■■□□□ 1.21
CASC4-208ENST00000559151 ANO8Q9HCE9 1232 aaPredicted RBP22.62■■□□□ 1.21
CASC4-208ENST00000559151 FECHP22830 423 aa22.61■■□□□ 1.21
CASC4-208ENST00000559151 HIC1Q14526 733 aa22.61■■□□□ 1.21
CASC4-208ENST00000559151 IRF6O14896 467 aa22.58■■□□□ 1.21
CASC4-208ENST00000559151 ERICH6Q7L0X2 663 aa22.56■■□□□ 1.2
CASC4-208ENST00000559151 PTGDRQ13258 359 aa22.55■■□□□ 1.2
CASC4-208ENST00000559151 IL27Q8NEV9 243 aa22.54■■□□□ 1.2
CASC4-208ENST00000559151 PCDHGA4Q9Y5G9 962 aa22.53■■□□□ 1.2
CASC4-208ENST00000559151 PHF14O94880 888 aa22.5■■□□□ 1.19
CASC4-208ENST00000559151 CDHR5Q9HBB8 845 aa22.5■■□□□ 1.19
CASC4-208ENST00000559151 EN1Q05925 392 aaPredicted RBP22.49■■□□□ 1.19
CASC4-208ENST00000559151 C14orf37Q86TY3 774 aa22.49■■□□□ 1.19
CASC4-208ENST00000559151 EPAS1Q99814 870 aa22.47■■□□□ 1.19
CASC4-208ENST00000559151 AMHR2Q16671 573 aa22.45■■□□□ 1.18
CASC4-208ENST00000559151 PCDHGA10Q9Y5H3 936 aa22.45■■□□□ 1.18
CASC4-208ENST00000559151 MAP3K7O43318 606 aa22.44■■□□□ 1.18
CASC4-208ENST00000559151 RBM33Q96EV2 1170 aaKnown RBP22.44■■□□□ 1.18
CASC4-208ENST00000559151 DAXXQ9UER7 740 aaPredicted RBP22.43■■□□□ 1.18
CASC4-208ENST00000559151 PARP9Q8IXQ6 854 aa22.4■■□□□ 1.18
CASC4-208ENST00000559151 NPDC1Q9NQX5 325 aaPredicted RBP22.4■■□□□ 1.18
CASC4-208ENST00000559151 SLAIN1Q8ND83 568 aa22.38■■□□□ 1.17
CASC4-208ENST00000559151 FAM117AQ9C073 453 aa22.38■■□□□ 1.17
CASC4-208ENST00000559151 KDM4FA0A1W2PPD8 638 aa22.37■■□□□ 1.17
CASC4-208ENST00000559151 TSR1Q2NL82 804 aaKnown RBP22.37■■□□□ 1.17
CASC4-208ENST00000559151 TYW1BQ6NUM6 668 aa22.37■■□□□ 1.17
CASC4-208ENST00000559151 POTEJP0CG39 1038 aa22.34■■□□□ 1.17
CASC4-208ENST00000559151 JPH4Q96JJ6 628 aa22.33■■□□□ 1.17
CASC4-208ENST00000559151 TTLL12Q14166 644 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms