RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 ST18O60284 1047 aa13.52□□□□□ -0.25
COPS2-204ENST00000558545 HOXB3P14651 431 aaPredicted RBP13.52□□□□□ -0.25
COPS2-204ENST00000558545 C2orf72A6NCS6 295 aa13.51□□□□□ -0.25
COPS2-204ENST00000558545 POTEMA6NI47 508 aa13.51□□□□□ -0.25
COPS2-204ENST00000558545 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
COPS2-204ENST00000558545 TMC2Q8TDI7 906 aa13.49□□□□□ -0.25
COPS2-204ENST00000558545 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.48□□□□□ -0.25
COPS2-204ENST00000558545 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
COPS2-204ENST00000558545 GPHNQ9NQX3 736 aaPredicted RBP13.45□□□□□ -0.26
COPS2-204ENST00000558545 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
COPS2-204ENST00000558545 ZSWIM6Q9HCJ5 1215 aa13.43□□□□□ -0.26
COPS2-204ENST00000558545 RIMBP2O15034 1052 aa13.42□□□□□ -0.26
COPS2-204ENST00000558545 CRISPLD2Q9H0B8 497 aa13.42□□□□□ -0.26
COPS2-204ENST00000558545 FOXK1P85037 733 aa13.41□□□□□ -0.26
COPS2-204ENST00000558545 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
COPS2-204ENST00000558545 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
COPS2-204ENST00000558545 SLC34A2O95436 690 aa13.38□□□□□ -0.27
COPS2-204ENST00000558545 HOXB1P14653 301 aaPredicted RBP13.38□□□□□ -0.27
COPS2-204ENST00000558545 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
COPS2-204ENST00000558545 PDE4AP27815 886 aa13.35□□□□□ -0.27
COPS2-204ENST00000558545 DSG2Q14126 1118 aa13.34□□□□□ -0.27
COPS2-204ENST00000558545 GPR153Q6NV75 609 aa13.34□□□□□ -0.27
COPS2-204ENST00000558545 PAXIP1Q6ZW49 1069 aaPredicted RBP13.34□□□□□ -0.27
COPS2-204ENST00000558545 PLPP6Q8IY26 295 aa13.32□□□□□ -0.28
COPS2-204ENST00000558545 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
COPS2-204ENST00000558545 MARVELD3Q96A59 401 aa13.31□□□□□ -0.28
COPS2-204ENST00000558545 EMP3P54852 163 aa13.3□□□□□ -0.28
COPS2-204ENST00000558545 MFSD10Q14728 455 aa13.3□□□□□ -0.28
COPS2-204ENST00000558545 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
COPS2-204ENST00000558545 PPP1R15BQ5SWA1 713 aa13.28□□□□□ -0.28
COPS2-204ENST00000558545 PTCD2Q8WV60 388 aaKnown RBP13.27□□□□□ -0.29
COPS2-204ENST00000558545 LARP6Q9BRS8 491 aaKnown RBP13.26□□□□□ -0.29
COPS2-204ENST00000558545 ARSIQ5FYB1 569 aa13.25□□□□□ -0.29
COPS2-204ENST00000558545 DDX27Q96GQ7 796 aaKnown RBP13.25□□□□□ -0.29
COPS2-204ENST00000558545 PCDHGA4Q9Y5G9 962 aa13.24□□□□□ -0.29
COPS2-204ENST00000558545 KHSRPQ92945 711 aaKnown RBP eCLIP13.2□□□□□ -0.31e-7■■■□□ 17.6
COPS2-204ENST00000558545 HS3ST6Q96QI5 342 aa13.2□□□□□ -0.3
COPS2-204ENST00000558545 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
COPS2-204ENST00000558545 POTEB3A0JP26 581 aa13.18□□□□□ -0.3
COPS2-204ENST00000558545 POTEBQ6S5H4 581 aa13.18□□□□□ -0.3
COPS2-204ENST00000558545 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
COPS2-204ENST00000558545 OXER1Q8TDS5 423 aa13.18□□□□□ -0.3
COPS2-204ENST00000558545 ERBB3P21860 1342 aa13.17□□□□□ -0.3
COPS2-204ENST00000558545 KDM4FA0A1W2PPD8 638 aa13.17□□□□□ -0.3
COPS2-204ENST00000558545 TBC1D12O60347 775 aa13.17□□□□□ -0.3
COPS2-204ENST00000558545 NUDT7P0C024 238 aa13.15□□□□□ -0.3
COPS2-204ENST00000558545 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
COPS2-204ENST00000558545 CAMK2BQ13554 666 aa13.12□□□□□ -0.31
COPS2-204ENST00000558545 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
COPS2-204ENST00000558545 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
COPS2-204ENST00000558545 UPF1Q92900 1129 aaKnown RBP eCLIP13.09□□□□□ -0.31
COPS2-204ENST00000558545 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
COPS2-204ENST00000558545 LHX6Q9UPM6 363 aa13.08□□□□□ -0.32
COPS2-204ENST00000558545 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
COPS2-204ENST00000558545 TSHZ2Q9NRE2 1034 aa13.07□□□□□ -0.32
COPS2-204ENST00000558545 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
COPS2-204ENST00000558545 KRTAP3-3Q9BYR6 98 aa13.03□□□□□ -0.32
COPS2-204ENST00000558545 KRTAP3-2Q9BYR7 98 aa13.03□□□□□ -0.32
COPS2-204ENST00000558545 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
COPS2-204ENST00000558545 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
COPS2-204ENST00000558545 WDR70Q9NW82 654 aa13□□□□□ -0.33
COPS2-204ENST00000558545 EVI5O60447 810 aa12.99□□□□□ -0.33
COPS2-204ENST00000558545 E2F4Q16254 413 aa12.98□□□□□ -0.33
COPS2-204ENST00000558545 ARIH1Q9Y4X5 557 aaPredicted RBP12.97□□□□□ -0.33
COPS2-204ENST00000558545 PBX2P40425 430 aa12.96□□□□□ -0.33
COPS2-204ENST00000558545 DPYSL4O14531 572 aa12.94□□□□□ -0.34
COPS2-204ENST00000558545 PPP4R3BQ5MIZ7 849 aa12.94□□□□□ -0.34
COPS2-204ENST00000558545 JPH4Q96JJ6 628 aa12.92□□□□□ -0.34
COPS2-204ENST00000558545 FOSBP53539 338 aa12.91□□□□□ -0.34
COPS2-204ENST00000558545 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
COPS2-204ENST00000558545 PDIA6Q15084 440 aa12.88□□□□□ -0.35
COPS2-204ENST00000558545 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
COPS2-204ENST00000558545 SPNS2Q8IVW8 549 aa12.87□□□□□ -0.35
COPS2-204ENST00000558545 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
COPS2-204ENST00000558545 ARHGAP33O14559 1287 aa12.86□□□□□ -0.35
COPS2-204ENST00000558545 PTGER2P43116 358 aa12.86□□□□□ -0.35
COPS2-204ENST00000558545 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.351e-8■■■□□ 14.8
COPS2-204ENST00000558545 BCL2L12Q9HB09 334 aa12.84□□□□□ -0.35
COPS2-204ENST00000558545 PHF14O94880 888 aa12.83□□□□□ -0.36
COPS2-204ENST00000558545 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
COPS2-204ENST00000558545 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
COPS2-204ENST00000558545 AXIN2Q9Y2T1 843 aa12.82□□□□□ -0.36
COPS2-204ENST00000558545 PCDHGA10Q9Y5H3 936 aa12.82□□□□□ -0.36
COPS2-204ENST00000558545 ARHGEF1Q92888 912 aaKnown RBP12.8□□□□□ -0.36
COPS2-204ENST00000558545 FBXW7Q969H0 707 aa12.8□□□□□ -0.36
COPS2-204ENST00000558545 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
COPS2-204ENST00000558545 EPAS1Q99814 870 aa12.79□□□□□ -0.36
COPS2-204ENST00000558545 KCNV2Q8TDN2 545 aa12.78□□□□□ -0.36
COPS2-204ENST00000558545 PSEN2P49810 448 aa12.77□□□□□ -0.37
COPS2-204ENST00000558545 P3H3Q8IVL6 736 aa12.77□□□□□ -0.37
COPS2-204ENST00000558545 KCNH8Q96L42 1107 aa12.77□□□□□ -0.37
COPS2-204ENST00000558545 ADAM33Q9BZ11 813 aa12.77□□□□□ -0.37
COPS2-204ENST00000558545 TK2O00142 265 aa12.76□□□□□ -0.37
COPS2-204ENST00000558545 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
COPS2-204ENST00000558545 ANKRD13DQ6ZTN6 518 aa12.76□□□□□ -0.37
COPS2-204ENST00000558545 KCNK17Q96T54 332 aa12.76□□□□□ -0.37
COPS2-204ENST00000558545 PTPREP23469 700 aa12.75□□□□□ -0.37
COPS2-204ENST00000558545 DMRTA1Q5VZB9 504 aa12.74□□□□□ -0.37
COPS2-204ENST00000558545 DDX12PQ92771 950 aa12.73□□□□□ -0.37
COPS2-204ENST00000558545 SLC4A5Q9BY07 1137 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms