RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 FANCAO15360 1455 aa27.28■■□□□ 1.96
TPM1-214ENST00000558544 NEO1Q92859 1461 aa27.26■■□□□ 1.95
TPM1-214ENST00000558544 GPATCH8Q9UKJ3 1502 aaKnown RBP27.26■■□□□ 1.95
TPM1-214ENST00000558544 CCNB3Q8WWL7 1395 aa27.25■■□□□ 1.95
TPM1-214ENST00000558544 AKNAQ7Z591 1439 aa27.19■■□□□ 1.94
TPM1-214ENST00000558544 EFCAB2Q5VUJ9 269 aa27.17■■□□□ 1.94
TPM1-214ENST00000558544 COL17A1Q9UMD9 1497 aaPredicted RBP27.16■■□□□ 1.94
TPM1-214ENST00000558544 PHLDB1Q86UU1 1377 aa27.16■■□□□ 1.94
TPM1-214ENST00000558544 SAMD9LQ8IVG5 1584 aa27.16■■□□□ 1.94
TPM1-214ENST00000558544 ADGRL1O94910 1474 aa27.15■■□□□ 1.94
TPM1-214ENST00000558544 PPARGC1BQ86YN6 1023 aaKnown RBP27.13■■□□□ 1.93
TPM1-214ENST00000558544 RICTORQ6R327 1708 aa27.13■■□□□ 1.93
TPM1-214ENST00000558544 ABCC1P33527 1531 aa27.13■■□□□ 1.93
TPM1-214ENST00000558544 CFDP1Q9UEE9 299 aaPredicted RBP27.12■■□□□ 1.93
TPM1-214ENST00000558544 MYOM3Q5VTT5 1437 aa27.11■■□□□ 1.93
TPM1-214ENST00000558544 ZNF777Q9ULD5 760 aaPredicted RBP27.1■■□□□ 1.93
TPM1-214ENST00000558544 FRMPD1Q5SYB0 1578 aa27.1■■□□□ 1.93
TPM1-214ENST00000558544 SCAPERQ9BY12 1400 aa27.07■■□□□ 1.92
TPM1-214ENST00000558544 DENND4BO75064 1496 aaPredicted RBP27.07■■□□□ 1.92
TPM1-214ENST00000558544 SYCP2Q9BX26 1530 aa27.06■■□□□ 1.92
TPM1-214ENST00000558544 CAMSAP2Q08AD1 1489 aa27.04■■□□□ 1.92
TPM1-214ENST00000558544 ARHGEF12Q9NZN5 1544 aa27.04■■□□□ 1.92
TPM1-214ENST00000558544 POGZQ7Z3K3 1410 aa27.03■■□□□ 1.92
TPM1-214ENST00000558544 RAPGEF3O95398 923 aa27.02■■□□□ 1.92
TPM1-214ENST00000558544 PLEKHH2Q8IVE3 1493 aa27.02■■□□□ 1.92
TPM1-214ENST00000558544 PTPN23Q9H3S7 1636 aa27.01■■□□□ 1.92
TPM1-214ENST00000558544 MIA2Q96PC5 1412 aa27.01■■□□□ 1.92
TPM1-214ENST00000558544 ZNF644Q9H582 1327 aaPredicted RBP27.01■■□□□ 1.91
TPM1-214ENST00000558544 FGD6Q6ZV73 1430 aa27■■□□□ 1.91
TPM1-214ENST00000558544 ZNF518AQ6AHZ1 1483 aa26.98■■□□□ 1.91
TPM1-214ENST00000558544 KIAA1107Q9UPP5 1409 aa26.97■■□□□ 1.91
TPM1-214ENST00000558544 TRAPPC8Q9Y2L5 1435 aa26.97■■□□□ 1.91
TPM1-214ENST00000558544 ZMYM4Q5VZL5 1548 aa26.97■■□□□ 1.91
TPM1-214ENST00000558544 KDM5CP41229 1560 aa26.96■■□□□ 1.91
TPM1-214ENST00000558544 HNRNPMP52272 730 aaKnown RBP eCLIP26.95■■□□□ 1.9
TPM1-214ENST00000558544 HECW2Q9P2P5 1572 aa26.92■■□□□ 1.9
TPM1-214ENST00000558544 TCOF1Q13428 1488 aaKnown RBP26.92■■□□□ 1.9
TPM1-214ENST00000558544 MBD5Q9P267 1494 aa26.92■■□□□ 1.9
TPM1-214ENST00000558544 ARHGEF5Q12774 1597 aa26.91■■□□□ 1.9
TPM1-214ENST00000558544 AFAP1Q8N556 730 aa26.91■■□□□ 1.9
TPM1-214ENST00000558544 ARHGEF40Q8TER5 1519 aa26.88■■□□□ 1.89
TPM1-214ENST00000558544 CCDC141Q6ZP82 1450 aa26.88■■□□□ 1.89
TPM1-214ENST00000558544 ZFYVE16Q7Z3T8 1539 aa26.87■■□□□ 1.89
TPM1-214ENST00000558544 KIDINS220Q9ULH0 1771 aa26.87■■□□□ 1.89
TPM1-214ENST00000558544 CROCC2H7BZ55 1655 aa26.86■■□□□ 1.89
TPM1-214ENST00000558544 INO80Q9ULG1 1556 aaPredicted RBP26.85■■□□□ 1.89
TPM1-214ENST00000558544 MAGI2Q86UL8 1455 aa26.84■■□□□ 1.89
TPM1-214ENST00000558544 DNMT1P26358 1616 aaKnown RBP26.84■■□□□ 1.89
TPM1-214ENST00000558544 YEATS2Q9ULM3 1422 aa26.83■■□□□ 1.89
TPM1-214ENST00000558544 MLH3Q9UHC1 1453 aa26.83■■□□□ 1.89
TPM1-214ENST00000558544 ABCA6Q8N139 1617 aa26.82■■□□□ 1.88
TPM1-214ENST00000558544 ATP7AQ04656 1500 aa26.82■■□□□ 1.88
TPM1-214ENST00000558544 FAM50AQ14320 339 aaKnown RBP26.81■■□□□ 1.88
TPM1-214ENST00000558544 MYT1LQ9UL68 1186 aa26.8■■□□□ 1.88
TPM1-214ENST00000558544 DIP2CQ9Y2E4 1556 aa26.8■■□□□ 1.88
TPM1-214ENST00000558544 SPAG9O60271 1321 aaKnown RBP26.79■■□□□ 1.88
TPM1-214ENST00000558544 RRBP1Q9P2E9 1410 aaKnown RBP26.77■■□□□ 1.88
TPM1-214ENST00000558544 RSPH4AQ5TD94 716 aa26.77■■□□□ 1.88
TPM1-214ENST00000558544 MAST1Q9Y2H9 1570 aa26.77■■□□□ 1.88
TPM1-214ENST00000558544 DAPK1P53355 1430 aa26.77■■□□□ 1.88
TPM1-214ENST00000558544 ADGBQ8N7X0 1667 aa26.75■■□□□ 1.87
TPM1-214ENST00000558544 ABCC5O15440 1437 aa26.75■■□□□ 1.87
TPM1-214ENST00000558544 SIGLEC1Q9BZZ2 1709 aa26.74■■□□□ 1.87
TPM1-214ENST00000558544 C9orf84Q5VXU9 1444 aa26.72■■□□□ 1.87
TPM1-214ENST00000558544 SHANK2Q9UPX8 1470 aa26.72■■□□□ 1.87
TPM1-214ENST00000558544 RTEL1-TNFRSF6BF6WH68 1400 aa26.72■■□□□ 1.87
TPM1-214ENST00000558544 ATP10AO60312 1499 aa26.71■■□□□ 1.87
TPM1-214ENST00000558544 TSPY4P0CV99 314 aa26.71■■□□□ 1.87
TPM1-214ENST00000558544 TSPY10P0CW01 314 aa26.71■■□□□ 1.87
TPM1-214ENST00000558544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.69■■□□□ 1.86
TPM1-214ENST00000558544 PLXNC1O60486 1568 aa26.68■■□□□ 1.86
TPM1-214ENST00000558544 REREQ9P2R6 1566 aa26.68■■□□□ 1.86
TPM1-214ENST00000558544 PTPRKQ15262 1439 aa26.62■■□□□ 1.85
TPM1-214ENST00000558544 A2MP01023 1474 aa26.61■■□□□ 1.85
TPM1-214ENST00000558544 ITGAEP38570 1179 aa26.6■■□□□ 1.85
TPM1-214ENST00000558544 CHIC2Q9UKJ5 165 aa26.6■■□□□ 1.85
TPM1-214ENST00000558544 ADGRL2O95490 1459 aa26.59■■□□□ 1.85
TPM1-214ENST00000558544 BCORL1Q5H9F3 1711 aa26.59■■□□□ 1.85
TPM1-214ENST00000558544 ARID4BQ4LE39 1312 aaPredicted RBP26.58■■□□□ 1.85
TPM1-214ENST00000558544 AGLP35573 1532 aa26.55■■□□□ 1.84
TPM1-214ENST00000558544 ANKRD30AQ9BXX3 1397 aa26.54■■□□□ 1.84
TPM1-214ENST00000558544 DUOX2Q9NRD8 1548 aa26.54■■□□□ 1.84
TPM1-214ENST00000558544 KIF15Q9NS87 1388 aa26.53■■□□□ 1.84
TPM1-214ENST00000558544 DHX29Q7Z478 1369 aaKnown RBP26.53■■□□□ 1.84
TPM1-214ENST00000558544 NCOA1Q15788 1441 aa26.52■■□□□ 1.84
TPM1-214ENST00000558544 RRP7BPQ9NSQ0 103 aa26.51■■□□□ 1.83
TPM1-214ENST00000558544 EIF2AK4Q9P2K8 1649 aaKnown RBP26.5■■□□□ 1.83
TPM1-214ENST00000558544 ADAMTSL3P82987 1691 aa26.5■■□□□ 1.83
TPM1-214ENST00000558544 FER1L4A9Z1Z3 1794 aa26.49■■□□□ 1.83
TPM1-214ENST00000558544 ROCK1Q13464 1354 aa26.47■■□□□ 1.83
TPM1-214ENST00000558544 MLECQ14165 292 aa26.47■■□□□ 1.83
TPM1-214ENST00000558544 MADDQ8WXG6 1647 aa26.47■■□□□ 1.83
TPM1-214ENST00000558544 ERBINQ96RT1 1412 aa26.45■■□□□ 1.82
TPM1-214ENST00000558544 GCC2Q8IWJ2 1684 aa26.44■■□□□ 1.82
TPM1-214ENST00000558544 RNF17Q9BXT8 1623 aaKnown RBP26.43■■□□□ 1.82
TPM1-214ENST00000558544 RIMS1Q86UR5 1692 aaKnown RBP26.43■■□□□ 1.82
TPM1-214ENST00000558544 KDM4FA0A1W2PPD8 638 aa26.4■■□□□ 1.82
TPM1-214ENST00000558544 KIF3BO15066 747 aa26.4■■□□□ 1.82
TPM1-214ENST00000558544 ANKRD50Q9ULJ7 1429 aa26.38■■□□□ 1.81
TPM1-214ENST00000558544 DEPDC5O75140 1603 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms