RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 CADPS2Q86UW7 1296 aa7.52□□□□□ -1.21
HERC1-203ENST00000558532 PLCB2Q00722 1185 aa7.51□□□□□ -1.21
HERC1-203ENST00000558532 C2orf72A6NCS6 295 aa7.5□□□□□ -1.21
HERC1-203ENST00000558532 NCKAP5LQ9HCH0 1330 aa7.5□□□□□ -1.21
HERC1-203ENST00000558532 CRISPLD2Q9H0B8 497 aa7.49□□□□□ -1.21
HERC1-203ENST00000558532 TMC2Q8TDI7 906 aa7.46□□□□□ -1.22
HERC1-203ENST00000558532 GPHNQ9NQX3 736 aaPredicted RBP7.46□□□□□ -1.22
HERC1-203ENST00000558532 HOXB3P14651 431 aaPredicted RBP7.45□□□□□ -1.22
HERC1-203ENST00000558532 TSHZ2Q9NRE2 1034 aa7.45□□□□□ -1.22
HERC1-203ENST00000558532 FOXK1P85037 733 aa7.44□□□□□ -1.22
HERC1-203ENST00000558532 DSG2Q14126 1118 aa7.44□□□□□ -1.22
HERC1-203ENST00000558532 MFSD10Q14728 455 aa7.43□□□□□ -1.22
HERC1-203ENST00000558532 LCE2DQ5TA82 110 aaPredicted RBP7.43□□□□□ -1.22
HERC1-203ENST00000558532 PDE4AP27815 886 aa7.42□□□□□ -1.22
HERC1-203ENST00000558532 LARP6Q9BRS8 491 aaKnown RBP7.42□□□□□ -1.22
HERC1-203ENST00000558532 SNPHO15079 494 aa7.4□□□□□ -1.22
HERC1-203ENST00000558532 PPP1R15BQ5SWA1 713 aa7.4□□□□□ -1.22
HERC1-203ENST00000558532 PLPP6Q8IY26 295 aa7.4□□□□□ -1.22
HERC1-203ENST00000558532 DDX27Q96GQ7 796 aaKnown RBP7.39□□□□□ -1.23
HERC1-203ENST00000558532 ST18O60284 1047 aa7.38□□□□□ -1.23
HERC1-203ENST00000558532 DOK7Q18PE1 504 aa7.38□□□□□ -1.23
HERC1-203ENST00000558532 SLC34A2O95436 690 aa7.37□□□□□ -1.23
HERC1-203ENST00000558532 HAP1P54257 671 aaPredicted RBP7.37□□□□□ -1.23
HERC1-203ENST00000558532 FAM163AQ96GL9 167 aaPredicted RBP7.37□□□□□ -1.23
HERC1-203ENST00000558532 GPR153Q6NV75 609 aa7.34□□□□□ -1.23
HERC1-203ENST00000558532 ZSWIM6Q9HCJ5 1215 aa7.34□□□□□ -1.23
HERC1-203ENST00000558532 RIMBP2O15034 1052 aa7.33□□□□□ -1.24
HERC1-203ENST00000558532 CAMK2BQ13554 666 aa7.33□□□□□ -1.24
HERC1-203ENST00000558532 ZNF710Q8N1W2 664 aa7.33□□□□□ -1.24
HERC1-203ENST00000558532 PTCD2Q8WV60 388 aaKnown RBP7.33□□□□□ -1.24
HERC1-203ENST00000558532 EMILIN3Q9NT22 766 aa7.33□□□□□ -1.24
HERC1-203ENST00000558532 HOXB1P14653 301 aaPredicted RBP7.32□□□□□ -1.24
HERC1-203ENST00000558532 ARSIQ5FYB1 569 aa7.32□□□□□ -1.24
HERC1-203ENST00000558532 OXER1Q8TDS5 423 aa7.32□□□□□ -1.24
HERC1-203ENST00000558532 KHSRPQ92945 711 aaKnown RBP eCLIP7.32□□□□□ -1.242e-7■□□□□ 10.2
HERC1-203ENST00000558532 PCDHGA4Q9Y5G9 962 aa7.32□□□□□ -1.24
HERC1-203ENST00000558532 UPF1Q92900 1129 aaKnown RBP eCLIP7.3□□□□□ -1.24
HERC1-203ENST00000558532 MARVELD3Q96A59 401 aa7.3□□□□□ -1.24
HERC1-203ENST00000558532 KDM2AQ9Y2K7 1162 aa7.3□□□□□ -1.24
HERC1-203ENST00000558532 KDM4FA0A1W2PPD8 638 aa7.29□□□□□ -1.24
HERC1-203ENST00000558532 NUDT7P0C024 238 aa7.28□□□□□ -1.24
HERC1-203ENST00000558532 E2F4Q16254 413 aa7.28□□□□□ -1.24
HERC1-203ENST00000558532 WDR70Q9NW82 654 aa7.28□□□□□ -1.24
HERC1-203ENST00000558532 POTEMA6NI47 508 aa7.26□□□□□ -1.25
HERC1-203ENST00000558532 EMP3P54852 163 aa7.26□□□□□ -1.25
HERC1-203ENST00000558532 POTEGQ6S5H5 508 aa7.26□□□□□ -1.25
HERC1-203ENST00000558532 POTEB3A0JP26 581 aa7.25□□□□□ -1.25
HERC1-203ENST00000558532 DPYSL4O14531 572 aa7.25□□□□□ -1.25
HERC1-203ENST00000558532 POTEBQ6S5H4 581 aa7.25□□□□□ -1.25
HERC1-203ENST00000558532 VSIG10Q8N0Z9 540 aa7.25□□□□□ -1.25
HERC1-203ENST00000558532 KCNV2Q8TDN2 545 aa7.25□□□□□ -1.25
HERC1-203ENST00000558532 TBC1D12O60347 775 aa7.24□□□□□ -1.25
HERC1-203ENST00000558532 ARIH1Q9Y4X5 557 aaPredicted RBP7.24□□□□□ -1.25
HERC1-203ENST00000558532 LHX6Q9UPM6 363 aa7.23□□□□□ -1.25
HERC1-203ENST00000558532 FAM205CA6NFA0 338 aa7.22□□□□□ -1.25
HERC1-203ENST00000558532 ZNF316A6NFI3 1004 aaPredicted RBP7.22□□□□□ -1.25
HERC1-203ENST00000558532 EVI5O60447 810 aa7.22□□□□□ -1.25
HERC1-203ENST00000558532 MAP3K9P80192 1104 aa7.22□□□□□ -1.25
HERC1-203ENST00000558532 HS3ST6Q96QI5 342 aa7.22□□□□□ -1.25
HERC1-203ENST00000558532 ANO8Q9HCE9 1232 aaPredicted RBP7.21□□□□□ -1.26
HERC1-203ENST00000558532 ERBB3P21860 1342 aa7.21□□□□□ -1.26
HERC1-203ENST00000558532 PDIA6Q15084 440 aa7.2□□□□□ -1.26
HERC1-203ENST00000558532 VARS2Q5ST30 1063 aaKnown RBP7.2□□□□□ -1.26
HERC1-203ENST00000558532 P3H3Q8IVL6 736 aa7.19□□□□□ -1.26
HERC1-203ENST00000558532 ARHGEF1Q92888 912 aaKnown RBP7.18□□□□□ -1.26
HERC1-203ENST00000558532 SPDYE16A6NNV3 312 aaPredicted RBP7.16□□□□□ -1.26
HERC1-203ENST00000558532 SLC24A1O60721 1099 aa7.16□□□□□ -1.26
HERC1-203ENST00000558532 PTGER2P43116 358 aa7.15□□□□□ -1.26
HERC1-203ENST00000558532 FOSBP53539 338 aa7.15□□□□□ -1.26
HERC1-203ENST00000558532 JPH4Q96JJ6 628 aa7.15□□□□□ -1.26
HERC1-203ENST00000558532 PSDA5PKW4 1024 aaPredicted RBP7.14□□□□□ -1.27
HERC1-203ENST00000558532 POTEEQ6S8J3 1075 aa7.14□□□□□ -1.27
HERC1-203ENST00000558532 CDAN1Q8IWY9 1227 aa7.14□□□□□ -1.27
HERC1-203ENST00000558532 ZNF687Q8N1G0 1237 aa7.14□□□□□ -1.27
HERC1-203ENST00000558532 ZNF454Q8N9F8 522 aa7.14□□□□□ -1.27
HERC1-203ENST00000558532 KRTAP3-3Q9BYR6 98 aa7.13□□□□□ -1.27
HERC1-203ENST00000558532 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
HERC1-203ENST00000558532 PCDHGA10Q9Y5H3 936 aa7.13□□□□□ -1.27
HERC1-203ENST00000558532 PPP4R3BQ5MIZ7 849 aa7.12□□□□□ -1.27
HERC1-203ENST00000558532 DDX12PQ92771 950 aa7.12□□□□□ -1.27
HERC1-203ENST00000558532 PHF14O94880 888 aa7.11□□□□□ -1.27
HERC1-203ENST00000558532 MLLT3P42568 568 aaPredicted RBP7.1□□□□□ -1.27
HERC1-203ENST00000558532 PRIM1P49642 420 aaKnown RBP7.1□□□□□ -1.27
HERC1-203ENST00000558532 SEMA3EO15041 775 aa7.09□□□□□ -1.27
HERC1-203ENST00000558532 NBR1Q14596 966 aa7.09□□□□□ -1.27
HERC1-203ENST00000558532 TYW1BQ6NUM6 668 aa7.09□□□□□ -1.27
HERC1-203ENST00000558532 ZDHHC16Q969W1 377 aa7.09□□□□□ -1.27
HERC1-203ENST00000558532 ADAM33Q9BZ11 813 aa7.09□□□□□ -1.27
HERC1-203ENST00000558532 BCL2L12Q9HB09 334 aa7.09□□□□□ -1.27
HERC1-203ENST00000558532 PCDH10Q9P2E7 1040 aa7.09□□□□□ -1.27
HERC1-203ENST00000558532 GRXCR2A6NFK2 248 aa7.08□□□□□ -1.28
HERC1-203ENST00000558532 EPAS1Q99814 870 aa7.08□□□□□ -1.28
HERC1-203ENST00000558532 AXIN2Q9Y2T1 843 aa7.08□□□□□ -1.28
HERC1-203ENST00000558532 OSBPP22059 807 aa7.07□□□□□ -1.28
HERC1-203ENST00000558532 PBX2P40425 430 aa7.07□□□□□ -1.28
HERC1-203ENST00000558532 FBXW7Q969H0 707 aa7.07□□□□□ -1.28
HERC1-203ENST00000558532 TESPA1A2RU30 521 aaPredicted RBP7.06□□□□□ -1.28
HERC1-203ENST00000558532 PSEN2P49810 448 aa7.06□□□□□ -1.28
HERC1-203ENST00000558532 EN1Q05925 392 aaPredicted RBP7.06□□□□□ -1.28
HERC1-203ENST00000558532 ARHGAP33O14559 1287 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms