RNA–Protein interactions for RNA: ENST00000558455.1

TMOD3-203, Transcript of tropomodulin 3, humanhuman

TSL 3

Gene TMOD3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-203ENST00000558455 TIAM1Q13009 1591 aa33.17■■■□□ 2.9
TMOD3-203ENST00000558455 CDC42BPBQ9Y5S2 1711 aa33.15■■■□□ 2.9
TMOD3-203ENST00000558455 SCAPERQ9BY12 1400 aa33.14■■■□□ 2.9
TMOD3-203ENST00000558455 RICTORQ6R327 1708 aa33.14■■■□□ 2.89
TMOD3-203ENST00000558455 CDC42BPAQ5VT25 1732 aa33.13■■■□□ 2.89
TMOD3-203ENST00000558455 GPATCH8Q9UKJ3 1502 aaKnown RBP33.1■■■□□ 2.89
TMOD3-203ENST00000558455 POGZQ7Z3K3 1410 aa33.09■■■□□ 2.89
TMOD3-203ENST00000558455 CCNB3Q8WWL7 1395 aa33.08■■■□□ 2.89
TMOD3-203ENST00000558455 MAP3K1Q13233 1512 aa33.06■■■□□ 2.88
TMOD3-203ENST00000558455 ZMYM4Q5VZL5 1548 aa33.05■■■□□ 2.88
TMOD3-203ENST00000558455 LRRC9Q6ZRR7 1453 aa33.04■■■□□ 2.88
TMOD3-203ENST00000558455 ABCC1P33527 1531 aa33.02■■■□□ 2.88
TMOD3-203ENST00000558455 SUPT6HQ7KZ85 1726 aaKnown RBP32.99■■■□□ 2.87
TMOD3-203ENST00000558455 NCOA2Q15596 1464 aa32.99■■■□□ 2.87
TMOD3-203ENST00000558455 ARHGEF40Q8TER5 1519 aa32.98■■■□□ 2.87
TMOD3-203ENST00000558455 KDM4FA0A1W2PPD8 638 aa32.98■■■□□ 2.87
TMOD3-203ENST00000558455 CFDP1Q9UEE9 299 aaPredicted RBP32.98■■■□□ 2.87
TMOD3-203ENST00000558455 ZNF518AQ6AHZ1 1483 aa32.98■■■□□ 2.87
TMOD3-203ENST00000558455 KANK4Q5T7N3 995 aaPredicted RBP32.97■■■□□ 2.87
TMOD3-203ENST00000558455 ZNF777Q9ULD5 760 aaPredicted RBP32.97■■■□□ 2.87
TMOD3-203ENST00000558455 ARHGEF12Q9NZN5 1544 aa32.97■■■□□ 2.87
TMOD3-203ENST00000558455 SAMD9LQ8IVG5 1584 aa32.96■■■□□ 2.87
TMOD3-203ENST00000558455 MAGI2Q86UL8 1455 aa32.95■■■□□ 2.87
TMOD3-203ENST00000558455 ZFYVE16Q7Z3T8 1539 aa32.94■■■□□ 2.86
TMOD3-203ENST00000558455 YEATS2Q9ULM3 1422 aa32.94■■■□□ 2.86
TMOD3-203ENST00000558455 APLP2Q06481 763 aa32.93■■■□□ 2.86
TMOD3-203ENST00000558455 AFAP1Q8N556 730 aa32.93■■■□□ 2.86
TMOD3-203ENST00000558455 ITSN2Q9NZM3 1697 aa32.93■■■□□ 2.86
TMOD3-203ENST00000558455 KDM5CP41229 1560 aa32.92■■■□□ 2.86
TMOD3-203ENST00000558455 AEBP2Q6ZN18 517 aaPredicted RBP32.92■■■□□ 2.86
TMOD3-203ENST00000558455 TRAPPC8Q9Y2L5 1435 aa32.92■■■□□ 2.86
TMOD3-203ENST00000558455 SYCP2Q9BX26 1530 aa32.89■■■□□ 2.86
TMOD3-203ENST00000558455 PLEKHH2Q8IVE3 1493 aa32.86■■■□□ 2.85
TMOD3-203ENST00000558455 KIAA1107Q9UPP5 1409 aa32.85■■■□□ 2.85
TMOD3-203ENST00000558455 HECW2Q9P2P5 1572 aa32.83■■■□□ 2.85
TMOD3-203ENST00000558455 ZNF644Q9H582 1327 aaPredicted RBP32.83■■■□□ 2.85
TMOD3-203ENST00000558455 HNRNPMP52272 730 aaKnown RBP eCLIP32.82■■■□□ 2.84
TMOD3-203ENST00000558455 MLH3Q9UHC1 1453 aa32.8■■■□□ 2.84
TMOD3-203ENST00000558455 ARID4BQ4LE39 1312 aaPredicted RBP32.78■■■□□ 2.84
TMOD3-203ENST00000558455 MYT1LQ9UL68 1186 aa32.78■■■□□ 2.84
TMOD3-203ENST00000558455 ATP10AO60312 1499 aa32.77■■■□□ 2.84
TMOD3-203ENST00000558455 C9orf84Q5VXU9 1444 aa32.75■■■□□ 2.83
TMOD3-203ENST00000558455 CAMSAP2Q08AD1 1489 aa32.74■■■□□ 2.83
TMOD3-203ENST00000558455 DIP2CQ9Y2E4 1556 aa32.74■■■□□ 2.83
TMOD3-203ENST00000558455 SIGLEC1Q9BZZ2 1709 aa32.74■■■□□ 2.83
TMOD3-203ENST00000558455 MBD5Q9P267 1494 aa32.73■■■□□ 2.83
TMOD3-203ENST00000558455 ABCA6Q8N139 1617 aa32.73■■■□□ 2.83
TMOD3-203ENST00000558455 MYOM3Q5VTT5 1437 aa32.72■■■□□ 2.83
TMOD3-203ENST00000558455 KIDINS220Q9ULH0 1771 aa32.7■■■□□ 2.83
TMOD3-203ENST00000558455 SPAG9O60271 1321 aaKnown RBP32.7■■■□□ 2.82
TMOD3-203ENST00000558455 BCORL1Q5H9F3 1711 aa32.69■■■□□ 2.82
TMOD3-203ENST00000558455 ADAMTSL3P82987 1691 aa32.67■■■□□ 2.82
TMOD3-203ENST00000558455 MIA2Q96PC5 1412 aa32.66■■■□□ 2.82
TMOD3-203ENST00000558455 ATP7AQ04656 1500 aa32.65■■■□□ 2.82
TMOD3-203ENST00000558455 INO80Q9ULG1 1556 aaPredicted RBP32.65■■■□□ 2.82
TMOD3-203ENST00000558455 REREQ9P2R6 1566 aa32.64■■■□□ 2.82
TMOD3-203ENST00000558455 CCDC141Q6ZP82 1450 aa32.62■■■□□ 2.81
TMOD3-203ENST00000558455 MADDQ8WXG6 1647 aa32.59■■■□□ 2.81
TMOD3-203ENST00000558455 ARHGEF5Q12774 1597 aa32.58■■■□□ 2.81
TMOD3-203ENST00000558455 MLECQ14165 292 aa32.57■■■□□ 2.8
TMOD3-203ENST00000558455 RSPH4AQ5TD94 716 aa32.56■■■□□ 2.8
TMOD3-203ENST00000558455 RTEL1-TNFRSF6BF6WH68 1400 aa32.53■■■□□ 2.8
TMOD3-203ENST00000558455 FGD6Q6ZV73 1430 aa32.53■■■□□ 2.8
TMOD3-203ENST00000558455 AGLP35573 1532 aa32.53■■■□□ 2.8
TMOD3-203ENST00000558455 PTPRMP28827 1452 aa32.52■■■□□ 2.8
TMOD3-203ENST00000558455 PTPN23Q9H3S7 1636 aa32.51■■■□□ 2.79
TMOD3-203ENST00000558455 A2MP01023 1474 aa32.48■■■□□ 2.79
TMOD3-203ENST00000558455 RIMS1Q86UR5 1692 aaKnown RBP32.47■■■□□ 2.79
TMOD3-203ENST00000558455 PLXNC1O60486 1568 aa32.47■■■□□ 2.79
TMOD3-203ENST00000558455 TCOF1Q13428 1488 aaKnown RBP32.46■■■□□ 2.79
TMOD3-203ENST00000558455 TSPY4P0CV99 314 aa32.45■■■□□ 2.79
TMOD3-203ENST00000558455 TSPY10P0CW01 314 aa32.45■■■□□ 2.79
TMOD3-203ENST00000558455 ADGBQ8N7X0 1667 aa32.44■■■□□ 2.78
TMOD3-203ENST00000558455 FER1L4A9Z1Z3 1794 aa32.44■■■□□ 2.78
TMOD3-203ENST00000558455 MAST1Q9Y2H9 1570 aa32.41■■■□□ 2.78
TMOD3-203ENST00000558455 PPARGC1BQ86YN6 1023 aaKnown RBP32.4■■■□□ 2.78
TMOD3-203ENST00000558455 ABCC5O15440 1437 aa32.37■■■□□ 2.77
TMOD3-203ENST00000558455 DHX29Q7Z478 1369 aaKnown RBP32.36■■■□□ 2.77
TMOD3-203ENST00000558455 DAPK1P53355 1430 aa32.34■■■□□ 2.77
TMOD3-203ENST00000558455 DNMT1P26358 1616 aaKnown RBP32.33■■■□□ 2.77
TMOD3-203ENST00000558455 SHANK2Q9UPX8 1470 aa32.33■■■□□ 2.77
TMOD3-203ENST00000558455 CROCC2H7BZ55 1655 aa32.33■■■□□ 2.77
TMOD3-203ENST00000558455 FAM50AQ14320 339 aaKnown RBP32.3■■■□□ 2.76
TMOD3-203ENST00000558455 PLPPR3Q6T4P5 718 aa32.3■■■□□ 2.76
TMOD3-203ENST00000558455 ESF1Q9H501 851 aaKnown RBP32.26■■■□□ 2.75
TMOD3-203ENST00000558455 GGT6Q6P531 493 aa32.25■■■□□ 2.75
TMOD3-203ENST00000558455 CNTLNQ9NXG0 1405 aa32.24■■■□□ 2.75
TMOD3-203ENST00000558455 KIF3BO15066 747 aa32.23■■■□□ 2.75
TMOD3-203ENST00000558455 CEBPAP49715 358 aaPredicted RBP32.22■■■□□ 2.75
TMOD3-203ENST00000558455 KIF15Q9NS87 1388 aa32.2■■■□□ 2.75
TMOD3-203ENST00000558455 DUOX2Q9NRD8 1548 aa32.18■■■□□ 2.74
TMOD3-203ENST00000558455 CHIC2Q9UKJ5 165 aa32.18■■■□□ 2.74
TMOD3-203ENST00000558455 RRP7BPQ9NSQ0 103 aa32.16■■■□□ 2.74
TMOD3-203ENST00000558455 C3P01024 1663 aa32.15■■■□□ 2.74
TMOD3-203ENST00000558455 PPP6R1Q9UPN7 881 aa32.15■■■□□ 2.74
TMOD3-203ENST00000558455 ANKRD30AQ9BXX3 1397 aa32.15■■■□□ 2.74
TMOD3-203ENST00000558455 MROH2AA6NES4 1674 aa32.14■■■□□ 2.74
TMOD3-203ENST00000558455 CLTCQ00610 1675 aaKnown RBP32.14■■■□□ 2.74
TMOD3-203ENST00000558455 EIF2AK4Q9P2K8 1649 aaKnown RBP32.13■■■□□ 2.73
TMOD3-203ENST00000558455 ADGRL2O95490 1459 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms