RNA–Protein interactions for RNA: ENST00000558258.1

AC009558.2-201, humanhuman

TSL 2 BASIC

Gene AC009558.2, Length 396 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009558.2-201ENST00000558258 G3V3G9 751 aa11.88□□□□□ -0.51
AC009558.2-201ENST00000558258 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
AC009558.2-201ENST00000558258 KIF3CO14782 793 aa11.84□□□□□ -0.51
AC009558.2-201ENST00000558258 C2orf72A6NCS6 295 aa11.82□□□□□ -0.52
AC009558.2-201ENST00000558258 MFSD10Q14728 455 aa11.82□□□□□ -0.52
AC009558.2-201ENST00000558258 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
AC009558.2-201ENST00000558258 LARP6Q9BRS8 491 aaKnown RBP11.8□□□□□ -0.52
AC009558.2-201ENST00000558258 PDE4AP27815 886 aa11.78□□□□□ -0.52
AC009558.2-201ENST00000558258 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
AC009558.2-201ENST00000558258 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
AC009558.2-201ENST00000558258 DSG2Q14126 1118 aa11.77□□□□□ -0.53
AC009558.2-201ENST00000558258 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.53
AC009558.2-201ENST00000558258 PPP1R15BQ5SWA1 713 aa11.75□□□□□ -0.53
AC009558.2-201ENST00000558258 LHX8Q68G74 356 aa11.75□□□□□ -0.53
AC009558.2-201ENST00000558258 FOXK1P85037 733 aa11.74□□□□□ -0.53
AC009558.2-201ENST00000558258 OTUD5Q96G74 571 aa11.74□□□□□ -0.53
AC009558.2-201ENST00000558258 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
AC009558.2-201ENST00000558258 KCNV2Q8TDN2 545 aa11.72□□□□□ -0.53
AC009558.2-201ENST00000558258 MAMSTRQ6ZN01 415 aa11.71□□□□□ -0.53
AC009558.2-201ENST00000558258 WDR70Q9NW82 654 aa11.7□□□□□ -0.54
AC009558.2-201ENST00000558258 PLPP6Q8IY26 295 aa11.69□□□□□ -0.54
AC009558.2-201ENST00000558258 SLAIN1Q8ND83 568 aa11.69□□□□□ -0.54
AC009558.2-201ENST00000558258 CAMK2BQ13554 666 aa11.68□□□□□ -0.54
AC009558.2-201ENST00000558258 E2F4Q16254 413 aa11.66□□□□□ -0.54
AC009558.2-201ENST00000558258 EMILIN3Q9NT22 766 aa11.65□□□□□ -0.54
AC009558.2-201ENST00000558258 P3H3Q8IVL6 736 aa11.61□□□□□ -0.55
AC009558.2-201ENST00000558258 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
AC009558.2-201ENST00000558258 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
AC009558.2-201ENST00000558258 OXER1Q8TDS5 423 aa11.56□□□□□ -0.56
AC009558.2-201ENST00000558258 ARIH1Q9Y4X5 557 aaPredicted RBP11.56□□□□□ -0.56
AC009558.2-201ENST00000558258 DPYSL4O14531 572 aa11.55□□□□□ -0.56
AC009558.2-201ENST00000558258 SLC34A2O95436 690 aa11.54□□□□□ -0.56
AC009558.2-201ENST00000558258 PTCD2Q8WV60 388 aaKnown RBP11.53□□□□□ -0.56
AC009558.2-201ENST00000558258 ARHGEF1Q92888 912 aaKnown RBP11.53□□□□□ -0.56
AC009558.2-201ENST00000558258 PDIA6Q15084 440 aa11.49□□□□□ -0.57
AC009558.2-201ENST00000558258 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
AC009558.2-201ENST00000558258 PCDHGA4Q9Y5G9 962 aa11.49□□□□□ -0.57
AC009558.2-201ENST00000558258 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.57
AC009558.2-201ENST00000558258 KDM4FA0A1W2PPD8 638 aa11.45□□□□□ -0.58
AC009558.2-201ENST00000558258 SEMA3EO15041 775 aa11.45□□□□□ -0.58
AC009558.2-201ENST00000558258 GPR153Q6NV75 609 aa11.45□□□□□ -0.58
AC009558.2-201ENST00000558258 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
AC009558.2-201ENST00000558258 NBR1Q14596 966 aa11.43□□□□□ -0.58
AC009558.2-201ENST00000558258 ARSIQ5FYB1 569 aa11.43□□□□□ -0.58
AC009558.2-201ENST00000558258 BCANQ96GW7 911 aa11.43□□□□□ -0.58
AC009558.2-201ENST00000558258 SNPHO15079 494 aa11.42□□□□□ -0.58
AC009558.2-201ENST00000558258 EVI5O60447 810 aa11.42□□□□□ -0.58
AC009558.2-201ENST00000558258 ZSWIM6Q9HCJ5 1215 aa11.42□□□□□ -0.58
AC009558.2-201ENST00000558258 RIMBP2O15034 1052 aa11.41□□□□□ -0.58
AC009558.2-201ENST00000558258 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
AC009558.2-201ENST00000558258 NUDT7P0C024 238 aa11.4□□□□□ -0.58
AC009558.2-201ENST00000558258 SPDYE16A6NNV3 312 aaPredicted RBP11.39□□□□□ -0.59
AC009558.2-201ENST00000558258 MLLT3P42568 568 aaPredicted RBP11.39□□□□□ -0.59
AC009558.2-201ENST00000558258 LCE2DQ5TA82 110 aaPredicted RBP11.39□□□□□ -0.59
AC009558.2-201ENST00000558258 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
AC009558.2-201ENST00000558258 TBC1D12O60347 775 aa11.38□□□□□ -0.59
AC009558.2-201ENST00000558258 ST18O60284 1047 aa11.37□□□□□ -0.59
AC009558.2-201ENST00000558258 HOXB1P14653 301 aaPredicted RBP11.37□□□□□ -0.59
AC009558.2-201ENST00000558258 ANO8Q9HCE9 1232 aaPredicted RBP11.36□□□□□ -0.59
AC009558.2-201ENST00000558258 ZNF316A6NFI3 1004 aaPredicted RBP11.32□□□□□ -0.6
AC009558.2-201ENST00000558258 PTGER2P43116 358 aa11.32□□□□□ -0.6
AC009558.2-201ENST00000558258 DDX12PQ92771 950 aa11.32□□□□□ -0.6
AC009558.2-201ENST00000558258 LHX6Q9UPM6 363 aa11.31□□□□□ -0.6
AC009558.2-201ENST00000558258 PRIM1P49642 420 aaKnown RBP11.3□□□□□ -0.6
AC009558.2-201ENST00000558258 FAM163AQ96GL9 167 aaPredicted RBP11.3□□□□□ -0.6
AC009558.2-201ENST00000558258 GRXCR2A6NFK2 248 aa11.29□□□□□ -0.6
AC009558.2-201ENST00000558258 MARVELD3Q96A59 401 aa11.29□□□□□ -0.6
AC009558.2-201ENST00000558258 FOSBP53539 338 aa11.27□□□□□ -0.61
AC009558.2-201ENST00000558258 JPH4Q96JJ6 628 aa11.27□□□□□ -0.61
AC009558.2-201ENST00000558258 PCDHGA10Q9Y5H3 936 aa11.27□□□□□ -0.61
AC009558.2-201ENST00000558258 OSBPP22059 807 aa11.26□□□□□ -0.61
AC009558.2-201ENST00000558258 PHF14O94880 888 aa11.24□□□□□ -0.61
AC009558.2-201ENST00000558258 EMP3P54852 163 aa11.24□□□□□ -0.61
AC009558.2-201ENST00000558258 RBM26Q5T8P6 1007 aaKnown RBP11.24□□□□□ -0.61
AC009558.2-201ENST00000558258 ZNF454Q8N9F8 522 aa11.24□□□□□ -0.61
AC009558.2-201ENST00000558258 LMOD2Q6P5Q4 547 aa11.23□□□□□ -0.61
AC009558.2-201ENST00000558258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
AC009558.2-201ENST00000558258 POTEB3A0JP26 581 aa11.21□□□□□ -0.61
AC009558.2-201ENST00000558258 POTEBQ6S5H4 581 aa11.21□□□□□ -0.61
AC009558.2-201ENST00000558258 EN1Q05925 392 aaPredicted RBP11.2□□□□□ -0.62
AC009558.2-201ENST00000558258 VARS2Q5ST30 1063 aaKnown RBP11.2□□□□□ -0.62
AC009558.2-201ENST00000558258 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
AC009558.2-201ENST00000558258 EPAS1Q99814 870 aa11.19□□□□□ -0.62
AC009558.2-201ENST00000558258 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
AC009558.2-201ENST00000558258 ERBB3P21860 1342 aa11.18□□□□□ -0.62
AC009558.2-201ENST00000558258 SMYD5Q6GMV2 418 aa11.18□□□□□ -0.62
AC009558.2-201ENST00000558258 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
AC009558.2-201ENST00000558258 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
AC009558.2-201ENST00000558258 TSR1Q2NL82 804 aaKnown RBP11.17□□□□□ -0.62
AC009558.2-201ENST00000558258 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
AC009558.2-201ENST00000558258 ZDHHC16Q969W1 377 aa11.17□□□□□ -0.62
AC009558.2-201ENST00000558258 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
AC009558.2-201ENST00000558258 GPR37O15354 613 aa11.16□□□□□ -0.62
AC009558.2-201ENST00000558258 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
AC009558.2-201ENST00000558258 PSDA5PKW4 1024 aaPredicted RBP11.15□□□□□ -0.62
AC009558.2-201ENST00000558258 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
AC009558.2-201ENST00000558258 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
AC009558.2-201ENST00000558258 MAP3K7O43318 606 aa11.14□□□□□ -0.63
AC009558.2-201ENST00000558258 POTEEQ6S8J3 1075 aa11.13□□□□□ -0.63
AC009558.2-201ENST00000558258 BCL2L12Q9HB09 334 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms