RNA–Protein interactions for RNA: ENST00000558222.1

PBX4-203, Transcript of PBX homeobox 4, humanhuman

TSL 2

Gene PBX4, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-203ENST00000558222 SCAPERQ9BY12 1400 aa27.04■■□□□ 1.92
PBX4-203ENST00000558222 ZFYVE16Q7Z3T8 1539 aa27.04■■□□□ 1.92
PBX4-203ENST00000558222 POGZQ7Z3K3 1410 aa27.03■■□□□ 1.92
PBX4-203ENST00000558222 CDK11AQ9UQ88 783 aaPredicted RBP27.02■■□□□ 1.92
PBX4-203ENST00000558222 CASKIN1Q8WXD9 1431 aa27■■□□□ 1.91
PBX4-203ENST00000558222 CLIP1P30622 1438 aa26.99■■□□□ 1.91
PBX4-203ENST00000558222 RIMS1Q86UR5 1692 aaKnown RBP26.98■■□□□ 1.91
PBX4-203ENST00000558222 ARHGAP5Q13017 1502 aa26.97■■□□□ 1.91
PBX4-203ENST00000558222 EFCAB2Q5VUJ9 269 aa26.96■■□□□ 1.91
PBX4-203ENST00000558222 CCDC18Q5T9S5 1454 aa26.95■■□□□ 1.91
PBX4-203ENST00000558222 MAGI2Q86UL8 1455 aa26.94■■□□□ 1.9
PBX4-203ENST00000558222 CDC42BPBQ9Y5S2 1711 aa26.93■■□□□ 1.9
PBX4-203ENST00000558222 FYCO1Q9BQS8 1478 aa26.92■■□□□ 1.9
PBX4-203ENST00000558222 PREX2Q70Z35 1606 aa26.9■■□□□ 1.9
PBX4-203ENST00000558222 KDM5CP41229 1560 aa26.86■■□□□ 1.89
PBX4-203ENST00000558222 MLECQ14165 292 aa26.86■■□□□ 1.89
PBX4-203ENST00000558222 ZNF518AQ6AHZ1 1483 aa26.86■■□□□ 1.89
PBX4-203ENST00000558222 PLPPR3Q6T4P5 718 aa26.84■■□□□ 1.89
PBX4-203ENST00000558222 C9orf84Q5VXU9 1444 aa26.83■■□□□ 1.89
PBX4-203ENST00000558222 ATP10AO60312 1499 aa26.83■■□□□ 1.89
PBX4-203ENST00000558222 CDC42BPAQ5VT25 1732 aa26.83■■□□□ 1.89
PBX4-203ENST00000558222 AFAP1Q8N556 730 aa26.83■■□□□ 1.89
PBX4-203ENST00000558222 FER1L4A9Z1Z3 1794 aa26.82■■□□□ 1.88
PBX4-203ENST00000558222 ABCC1P33527 1531 aa26.82■■□□□ 1.88
PBX4-203ENST00000558222 ARHGEF12Q9NZN5 1544 aa26.82■■□□□ 1.88
PBX4-203ENST00000558222 LMTK3Q96Q04 1460 aa26.8■■□□□ 1.88
PBX4-203ENST00000558222 ITSN2Q9NZM3 1697 aa26.79■■□□□ 1.88
PBX4-203ENST00000558222 ILDR1Q86SU0 546 aaPredicted RBP26.79■■□□□ 1.88
PBX4-203ENST00000558222 TRAPPC8Q9Y2L5 1435 aa26.79■■□□□ 1.88
PBX4-203ENST00000558222 DIP2CQ9Y2E4 1556 aa26.79■■□□□ 1.88
PBX4-203ENST00000558222 ABCA6Q8N139 1617 aa26.77■■□□□ 1.88
PBX4-203ENST00000558222 MYT1LQ9UL68 1186 aa26.75■■□□□ 1.87
PBX4-203ENST00000558222 SAMD9LQ8IVG5 1584 aa26.72■■□□□ 1.87
PBX4-203ENST00000558222 GPATCH8Q9UKJ3 1502 aaKnown RBP26.7■■□□□ 1.87
PBX4-203ENST00000558222 MLH3Q9UHC1 1453 aa26.7■■□□□ 1.87
PBX4-203ENST00000558222 CEP162Q5TB80 1403 aa26.7■■□□□ 1.86
PBX4-203ENST00000558222 ZNF777Q9ULD5 760 aaPredicted RBP26.68■■□□□ 1.86
PBX4-203ENST00000558222 SYCP2Q9BX26 1530 aa26.68■■□□□ 1.86
PBX4-203ENST00000558222 REREQ9P2R6 1566 aa26.67■■□□□ 1.86
PBX4-203ENST00000558222 KIDINS220Q9ULH0 1771 aa26.67■■□□□ 1.86
PBX4-203ENST00000558222 HSPA2P54652 639 aa26.66■■□□□ 1.86
PBX4-203ENST00000558222 MTUS2Q5JR59 1369 aa26.64■■□□□ 1.86
PBX4-203ENST00000558222 CEBPAP49715 358 aaPredicted RBP26.62■■□□□ 1.85
PBX4-203ENST00000558222 CCNB3Q8WWL7 1395 aa26.6■■□□□ 1.85
PBX4-203ENST00000558222 AGLP35573 1532 aa26.59■■□□□ 1.85
PBX4-203ENST00000558222 EHBP1L1Q8N3D4 1523 aa26.59■■□□□ 1.85
PBX4-203ENST00000558222 TIAM1Q13009 1591 aa26.58■■□□□ 1.85
PBX4-203ENST00000558222 HNRNPMP52272 730 aaKnown RBP eCLIP26.58■■□□□ 1.85
PBX4-203ENST00000558222 CFDP1Q9UEE9 299 aaPredicted RBP26.56■■□□□ 1.84
PBX4-203ENST00000558222 PREX1Q8TCU6 1659 aa26.55■■□□□ 1.84
PBX4-203ENST00000558222 SPAG9O60271 1321 aaKnown RBP26.52■■□□□ 1.84
PBX4-203ENST00000558222 C3P01024 1663 aa26.52■■□□□ 1.84
PBX4-203ENST00000558222 ATP7AQ04656 1500 aa26.52■■□□□ 1.84
PBX4-203ENST00000558222 INO80Q9ULG1 1556 aaPredicted RBP26.52■■□□□ 1.84
PBX4-203ENST00000558222 PLEKHH2Q8IVE3 1493 aa26.51■■□□□ 1.83
PBX4-203ENST00000558222 KIAA1107Q9UPP5 1409 aa26.51■■□□□ 1.83
PBX4-203ENST00000558222 LOC105371045A0A1W2PR82 267 aa26.51■■□□□ 1.83
PBX4-203ENST00000558222 ZNF644Q9H582 1327 aaPredicted RBP26.5■■□□□ 1.83
PBX4-203ENST00000558222 SUPT6HQ7KZ85 1726 aaKnown RBP26.49■■□□□ 1.83
PBX4-203ENST00000558222 PLXNC1O60486 1568 aa26.44■■□□□ 1.82
PBX4-203ENST00000558222 UHRF1BP1Q6BDS2 1440 aa26.43■■□□□ 1.82
PBX4-203ENST00000558222 NCOA2Q15596 1464 aa26.42■■□□□ 1.82
PBX4-203ENST00000558222 MBD5Q9P267 1494 aa26.42■■□□□ 1.82
PBX4-203ENST00000558222 A2MP01023 1474 aa26.42■■□□□ 1.82
PBX4-203ENST00000558222 ESF1Q9H501 851 aaKnown RBP26.41■■□□□ 1.82
PBX4-203ENST00000558222 VPS8Q8N3P4 1428 aa26.39■■□□□ 1.82
PBX4-203ENST00000558222 CNTLNQ9NXG0 1405 aa26.39■■□□□ 1.81
PBX4-203ENST00000558222 SETD1BQ9UPS6 1966 aaKnown RBP26.38■■□□□ 1.81
PBX4-203ENST00000558222 FBXO41Q8TF61 875 aa26.38■■□□□ 1.81
PBX4-203ENST00000558222 STRCQ7RTU9 1775 aa26.37■■□□□ 1.81
PBX4-203ENST00000558222 MROH2AA6NES4 1674 aa26.36■■□□□ 1.81
PBX4-203ENST00000558222 CAMSAP2Q08AD1 1489 aa26.36■■□□□ 1.81
PBX4-203ENST00000558222 CLTCQ00610 1675 aaKnown RBP26.35■■□□□ 1.81
PBX4-203ENST00000558222 ADGBQ8N7X0 1667 aa26.35■■□□□ 1.81
PBX4-203ENST00000558222 CCDC141Q6ZP82 1450 aa26.3■■□□□ 1.8
PBX4-203ENST00000558222 LRRC9Q6ZRR7 1453 aa26.3■■□□□ 1.8
PBX4-203ENST00000558222 ZMYM3Q14202 1370 aa26.3■■□□□ 1.8
PBX4-203ENST00000558222 GGT6Q6P531 493 aa26.29■■□□□ 1.8
PBX4-203ENST00000558222 RTEL1-TNFRSF6BF6WH68 1400 aa26.28■■□□□ 1.8
PBX4-203ENST00000558222 NPATQ14207 1427 aa26.25■■□□□ 1.79
PBX4-203ENST00000558222 KANK4Q5T7N3 995 aaPredicted RBP26.25■■□□□ 1.79
PBX4-203ENST00000558222 DHX29Q7Z478 1369 aaKnown RBP26.22■■□□□ 1.79
PBX4-203ENST00000558222 CERKQ8TCT0 537 aa26.22■■□□□ 1.79
PBX4-203ENST00000558222 ARHGEF5Q12774 1597 aa26.21■■□□□ 1.79
PBX4-203ENST00000558222 PTPRKQ15262 1439 aa26.21■■□□□ 1.79
PBX4-203ENST00000558222 MYO3AQ8NEV4 1616 aa26.21■■□□□ 1.79
PBX4-203ENST00000558222 NCOA1Q15788 1441 aa26.2■■□□□ 1.78
PBX4-203ENST00000558222 MAP3K1Q13233 1512 aa26.19■■□□□ 1.78
PBX4-203ENST00000558222 CAMSAP1Q5T5Y3 1602 aa26.18■■□□□ 1.78
PBX4-203ENST00000558222 ZNF142P52746 1687 aaPredicted RBP26.16■■□□□ 1.78
PBX4-203ENST00000558222 PTPRTO14522 1441 aa26.15■■□□□ 1.78
PBX4-203ENST00000558222 KIF3BO15066 747 aa26.15■■□□□ 1.78
PBX4-203ENST00000558222 DMRT2Q9Y5R5 561 aa26.15■■□□□ 1.78
PBX4-203ENST00000558222 CEP170BQ9Y4F5 1589 aaPredicted RBP26.13■■□□□ 1.77
PBX4-203ENST00000558222 RSPH4AQ5TD94 716 aa26.12■■□□□ 1.77
PBX4-203ENST00000558222 MYOM3Q5VTT5 1437 aa26.12■■□□□ 1.77
PBX4-203ENST00000558222 KDM5DQ9BY66 1539 aa26.1■■□□□ 1.77
PBX4-203ENST00000558222 PPP6R1Q9UPN7 881 aa26.1■■□□□ 1.77
PBX4-203ENST00000558222 MAST1Q9Y2H9 1570 aa26.09■■□□□ 1.77
PBX4-203ENST00000558222 TSPY4P0CV99 314 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms