RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 ARHGAP5Q13017 1502 aa26.25■■□□□ 1.79
PBX4-202ENST00000557978 AKNAQ7Z591 1439 aa26.24■■□□□ 1.79
PBX4-202ENST00000557978 ITSN2Q9NZM3 1697 aa26.24■■□□□ 1.79
PBX4-202ENST00000557978 COL17A1Q9UMD9 1497 aaPredicted RBP26.23■■□□□ 1.79
PBX4-202ENST00000557978 CCNB3Q8WWL7 1395 aa26.21■■□□□ 1.79
PBX4-202ENST00000557978 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
PBX4-202ENST00000557978 NCOA2Q15596 1464 aa26.18■■□□□ 1.78
PBX4-202ENST00000557978 KANK4Q5T7N3 995 aaPredicted RBP26.18■■□□□ 1.78
PBX4-202ENST00000557978 ADGRL1O94910 1474 aa26.16■■□□□ 1.78
PBX4-202ENST00000557978 RICTORQ6R327 1708 aa26.16■■□□□ 1.78
PBX4-202ENST00000557978 DENND4BO75064 1496 aaPredicted RBP26.14■■□□□ 1.78
PBX4-202ENST00000557978 CFDP1Q9UEE9 299 aaPredicted RBP26.13■■□□□ 1.77
PBX4-202ENST00000557978 SCAPERQ9BY12 1400 aa26.11■■□□□ 1.77
PBX4-202ENST00000557978 RAPGEF3O95398 923 aa26.09■■□□□ 1.77
PBX4-202ENST00000557978 FRMPD1Q5SYB0 1578 aa26.09■■□□□ 1.77
PBX4-202ENST00000557978 SAMD9LQ8IVG5 1584 aa26.08■■□□□ 1.77
PBX4-202ENST00000557978 ZNF777Q9ULD5 760 aaPredicted RBP26.08■■□□□ 1.77
PBX4-202ENST00000557978 ABCC1P33527 1531 aa26.07■■□□□ 1.76
PBX4-202ENST00000557978 PLEKHH2Q8IVE3 1493 aa26.05■■□□□ 1.76
PBX4-202ENST00000557978 POGZQ7Z3K3 1410 aa26.04■■□□□ 1.76
PBX4-202ENST00000557978 ZNF518AQ6AHZ1 1483 aa26.03■■□□□ 1.76
PBX4-202ENST00000557978 ZMYM4Q5VZL5 1548 aa26.02■■□□□ 1.76
PBX4-202ENST00000557978 MYOM3Q5VTT5 1437 aa26■■□□□ 1.75
PBX4-202ENST00000557978 KIAA1107Q9UPP5 1409 aa25.99■■□□□ 1.75
PBX4-202ENST00000557978 SYCP2Q9BX26 1530 aa25.99■■□□□ 1.75
PBX4-202ENST00000557978 ARHGEF12Q9NZN5 1544 aa25.98■■□□□ 1.75
PBX4-202ENST00000557978 MAGI2Q86UL8 1455 aa25.98■■□□□ 1.75
PBX4-202ENST00000557978 MIA2Q96PC5 1412 aa25.98■■□□□ 1.75
PBX4-202ENST00000557978 KDM5CP41229 1560 aa25.97■■□□□ 1.75
PBX4-202ENST00000557978 CAMSAP2Q08AD1 1489 aa25.95■■□□□ 1.74
PBX4-202ENST00000557978 AFAP1Q8N556 730 aa25.95■■□□□ 1.74
PBX4-202ENST00000557978 HNRNPMP52272 730 aaKnown RBP eCLIP25.94■■□□□ 1.74
PBX4-202ENST00000557978 TRAPPC8Q9Y2L5 1435 aa25.94■■□□□ 1.74
PBX4-202ENST00000557978 ZNF644Q9H582 1327 aaPredicted RBP25.93■■□□□ 1.74
PBX4-202ENST00000557978 HECW2Q9P2P5 1572 aa25.93■■□□□ 1.74
PBX4-202ENST00000557978 ZFYVE16Q7Z3T8 1539 aa25.92■■□□□ 1.74
PBX4-202ENST00000557978 ARHGEF40Q8TER5 1519 aa25.91■■□□□ 1.74
PBX4-202ENST00000557978 MYT1LQ9UL68 1186 aa25.89■■□□□ 1.74
PBX4-202ENST00000557978 MLH3Q9UHC1 1453 aa25.89■■□□□ 1.73
PBX4-202ENST00000557978 RSPH4AQ5TD94 716 aa25.88■■□□□ 1.73
PBX4-202ENST00000557978 PTPN23Q9H3S7 1636 aa25.88■■□□□ 1.73
PBX4-202ENST00000557978 MBD5Q9P267 1494 aa25.88■■□□□ 1.73
PBX4-202ENST00000557978 KIDINS220Q9ULH0 1771 aa25.87■■□□□ 1.73
PBX4-202ENST00000557978 ARHGEF5Q12774 1597 aa25.87■■□□□ 1.73
PBX4-202ENST00000557978 FGD6Q6ZV73 1430 aa25.86■■□□□ 1.73
PBX4-202ENST00000557978 YEATS2Q9ULM3 1422 aa25.84■■□□□ 1.73
PBX4-202ENST00000557978 SPAG9O60271 1321 aaKnown RBP25.84■■□□□ 1.73
PBX4-202ENST00000557978 CCDC141Q6ZP82 1450 aa25.83■■□□□ 1.73
PBX4-202ENST00000557978 PPARGC1BQ86YN6 1023 aaKnown RBP25.82■■□□□ 1.72
PBX4-202ENST00000557978 ATP10AO60312 1499 aa25.81■■□□□ 1.72
PBX4-202ENST00000557978 ATP7AQ04656 1500 aa25.81■■□□□ 1.72
PBX4-202ENST00000557978 INO80Q9ULG1 1556 aaPredicted RBP25.81■■□□□ 1.72
PBX4-202ENST00000557978 ABCA6Q8N139 1617 aa25.81■■□□□ 1.72
PBX4-202ENST00000557978 DIP2CQ9Y2E4 1556 aa25.8■■□□□ 1.72
PBX4-202ENST00000557978 TCOF1Q13428 1488 aaKnown RBP25.79■■□□□ 1.72
PBX4-202ENST00000557978 C9orf84Q5VXU9 1444 aa25.77■■□□□ 1.72
PBX4-202ENST00000557978 TSPY4P0CV99 314 aa25.77■■□□□ 1.72
PBX4-202ENST00000557978 TSPY10P0CW01 314 aa25.77■■□□□ 1.72
PBX4-202ENST00000557978 RTEL1-TNFRSF6BF6WH68 1400 aa25.76■■□□□ 1.71
PBX4-202ENST00000557978 ADGBQ8N7X0 1667 aa25.76■■□□□ 1.71
PBX4-202ENST00000557978 REREQ9P2R6 1566 aa25.75■■□□□ 1.71
PBX4-202ENST00000557978 CROCC2H7BZ55 1655 aa25.74■■□□□ 1.71
PBX4-202ENST00000557978 ARID4BQ4LE39 1312 aaPredicted RBP25.74■■□□□ 1.71
PBX4-202ENST00000557978 DNMT1P26358 1616 aaKnown RBP25.74■■□□□ 1.71
PBX4-202ENST00000557978 SIGLEC1Q9BZZ2 1709 aa25.73■■□□□ 1.71
PBX4-202ENST00000557978 MAST1Q9Y2H9 1570 aa25.72■■□□□ 1.71
PBX4-202ENST00000557978 BCORL1Q5H9F3 1711 aa25.72■■□□□ 1.71
PBX4-202ENST00000557978 FAM50AQ14320 339 aaKnown RBP25.69■■□□□ 1.7
PBX4-202ENST00000557978 DAPK1P53355 1430 aa25.67■■□□□ 1.7
PBX4-202ENST00000557978 ABCC5O15440 1437 aa25.66■■□□□ 1.7
PBX4-202ENST00000557978 SHANK2Q9UPX8 1470 aa25.65■■□□□ 1.7
PBX4-202ENST00000557978 AGLP35573 1532 aa25.64■■□□□ 1.7
PBX4-202ENST00000557978 ADAMTSL3P82987 1691 aa25.64■■□□□ 1.7
PBX4-202ENST00000557978 A2MP01023 1474 aa25.64■■□□□ 1.69
PBX4-202ENST00000557978 KDM4FA0A1W2PPD8 638 aa25.63■■□□□ 1.69
PBX4-202ENST00000557978 PLXNC1O60486 1568 aa25.63■■□□□ 1.69
PBX4-202ENST00000557978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.62■■□□□ 1.69
PBX4-202ENST00000557978 RRBP1Q9P2E9 1410 aaKnown RBP25.59■■□□□ 1.69
PBX4-202ENST00000557978 FER1L4A9Z1Z3 1794 aa25.59■■□□□ 1.69
PBX4-202ENST00000557978 DHX29Q7Z478 1369 aaKnown RBP25.58■■□□□ 1.69
PBX4-202ENST00000557978 MADDQ8WXG6 1647 aa25.57■■□□□ 1.68
PBX4-202ENST00000557978 MLECQ14165 292 aa25.56■■□□□ 1.68
PBX4-202ENST00000557978 RIMS1Q86UR5 1692 aaKnown RBP25.53■■□□□ 1.68
PBX4-202ENST00000557978 ANKRD30AQ9BXX3 1397 aa25.53■■□□□ 1.68
PBX4-202ENST00000557978 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
PBX4-202ENST00000557978 DUOX2Q9NRD8 1548 aa25.52■■□□□ 1.68
PBX4-202ENST00000557978 CHIC2Q9UKJ5 165 aa25.52■■□□□ 1.68
PBX4-202ENST00000557978 EIF2AK4Q9P2K8 1649 aaKnown RBP25.51■■□□□ 1.67
PBX4-202ENST00000557978 ADGRL2O95490 1459 aa25.51■■□□□ 1.67
PBX4-202ENST00000557978 KIF15Q9NS87 1388 aa25.49■■□□□ 1.67
PBX4-202ENST00000557978 NCOA1Q15788 1441 aa25.48■■□□□ 1.67
PBX4-202ENST00000557978 RRP7BPQ9NSQ0 103 aa25.47■■□□□ 1.67
PBX4-202ENST00000557978 ESF1Q9H501 851 aaKnown RBP25.46■■□□□ 1.67
PBX4-202ENST00000557978 KIF3BO15066 747 aa25.46■■□□□ 1.67
PBX4-202ENST00000557978 ITGAEP38570 1179 aa25.45■■□□□ 1.66
PBX4-202ENST00000557978 GGT6Q6P531 493 aa25.45■■□□□ 1.66
PBX4-202ENST00000557978 PTPRKQ15262 1439 aa25.44■■□□□ 1.66
PBX4-202ENST00000557978 PTPRMP28827 1452 aa25.44■■□□□ 1.66
PBX4-202ENST00000557978 ERBINQ96RT1 1412 aa25.43■■□□□ 1.66
PBX4-202ENST00000557978 PPP6R1Q9UPN7 881 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms