RNA–Protein interactions for RNA: ENST00000557960.1

IDH3A-203, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 3

Gene IDH3A, Length 424 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-203ENST00000557960 PDE4AP27815 886 aa9.99□□□□□ -0.81
IDH3A-203ENST00000557960 TMEM92Q6UXU6 159 aa9.98□□□□□ -0.81
IDH3A-203ENST00000557960 GPHNQ9NQX3 736 aaPredicted RBP9.98□□□□□ -0.81
IDH3A-203ENST00000557960 MFSD10Q14728 455 aa9.97□□□□□ -0.81
IDH3A-203ENST00000557960 LARP6Q9BRS8 491 aaKnown RBP9.97□□□□□ -0.81
IDH3A-203ENST00000557960 KIF3CO14782 793 aa9.96□□□□□ -0.82
IDH3A-203ENST00000557960 C3orf67Q6ZVT6 689 aa9.96□□□□□ -0.82
IDH3A-203ENST00000557960 C2orf72A6NCS6 295 aa9.94□□□□□ -0.82
IDH3A-203ENST00000557960 TMC2Q8TDI7 906 aa9.94□□□□□ -0.82
IDH3A-203ENST00000557960 WDR70Q9NW82 654 aa9.94□□□□□ -0.82
IDH3A-203ENST00000557960 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
IDH3A-203ENST00000557960 FOXK1P85037 733 aa9.92□□□□□ -0.82
IDH3A-203ENST00000557960 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.92□□□□□ -0.82
IDH3A-203ENST00000557960 DSG2Q14126 1118 aa9.91□□□□□ -0.82
IDH3A-203ENST00000557960 PPP1R15BQ5SWA1 713 aa9.9□□□□□ -0.82
IDH3A-203ENST00000557960 MAMSTRQ6ZN01 415 aa9.89□□□□□ -0.83
IDH3A-203ENST00000557960 CAMK2BQ13554 666 aa9.87□□□□□ -0.83
IDH3A-203ENST00000557960 E2F4Q16254 413 aa9.87□□□□□ -0.83
IDH3A-203ENST00000557960 SCUBE2Q9NQ36 999 aa9.87□□□□□ -0.83
IDH3A-203ENST00000557960 PLPP6Q8IY26 295 aa9.86□□□□□ -0.83
IDH3A-203ENST00000557960 KCNV2Q8TDN2 545 aa9.86□□□□□ -0.83
IDH3A-203ENST00000557960 LHX8Q68G74 356 aa9.85□□□□□ -0.83
IDH3A-203ENST00000557960 P3H3Q8IVL6 736 aa9.84□□□□□ -0.83
IDH3A-203ENST00000557960 OTUD5Q96G74 571 aa9.83□□□□□ -0.84
IDH3A-203ENST00000557960 SLAIN1Q8ND83 568 aa9.82□□□□□ -0.84
IDH3A-203ENST00000557960 ARHGEF1Q92888 912 aaKnown RBP9.8□□□□□ -0.84
IDH3A-203ENST00000557960 EMILIN3Q9NT22 766 aa9.8□□□□□ -0.84
IDH3A-203ENST00000557960 ARIH1Q9Y4X5 557 aaPredicted RBP9.8□□□□□ -0.84
IDH3A-203ENST00000557960 SLC34A2O95436 690 aa9.76□□□□□ -0.85
IDH3A-203ENST00000557960 OXER1Q8TDS5 423 aa9.75□□□□□ -0.85
IDH3A-203ENST00000557960 HOXB3P14651 431 aaPredicted RBP9.74□□□□□ -0.85
IDH3A-203ENST00000557960 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
IDH3A-203ENST00000557960 BCANQ96GW7 911 aa9.74□□□□□ -0.85
IDH3A-203ENST00000557960 DPYSL4O14531 572 aa9.72□□□□□ -0.85
IDH3A-203ENST00000557960 UPF1Q92900 1129 aaKnown RBP eCLIP9.71□□□□□ -0.863e-6■■■■□ 26.2
IDH3A-203ENST00000557960 NBR1Q14596 966 aa9.7□□□□□ -0.86
IDH3A-203ENST00000557960 DOK7Q18PE1 504 aa9.69□□□□□ -0.86
IDH3A-203ENST00000557960 MAP3K9P80192 1104 aa9.68□□□□□ -0.86
IDH3A-203ENST00000557960 PDIA6Q15084 440 aa9.68□□□□□ -0.86
IDH3A-203ENST00000557960 PCDHGA4Q9Y5G9 962 aa9.67□□□□□ -0.86
IDH3A-203ENST00000557960 SPDYE16A6NNV3 312 aaPredicted RBP9.66□□□□□ -0.86
IDH3A-203ENST00000557960 SNPHO15079 494 aa9.66□□□□□ -0.86
IDH3A-203ENST00000557960 TBC1D12O60347 775 aa9.66□□□□□ -0.86
IDH3A-203ENST00000557960 SEMA3EO15041 775 aa9.65□□□□□ -0.86
IDH3A-203ENST00000557960 ZSWIM6Q9HCJ5 1215 aa9.65□□□□□ -0.86
IDH3A-203ENST00000557960 KDM4FA0A1W2PPD8 638 aa9.64□□□□□ -0.87
IDH3A-203ENST00000557960 GPR153Q6NV75 609 aa9.64□□□□□ -0.87
IDH3A-203ENST00000557960 TESPA1A2RU30 521 aaPredicted RBP9.63□□□□□ -0.87
IDH3A-203ENST00000557960 EVI5O60447 810 aa9.63□□□□□ -0.87
IDH3A-203ENST00000557960 RIMBP2O15034 1052 aa9.62□□□□□ -0.87
IDH3A-203ENST00000557960 ANO8Q9HCE9 1232 aaPredicted RBP9.62□□□□□ -0.87
IDH3A-203ENST00000557960 ARSIQ5FYB1 569 aa9.61□□□□□ -0.87
IDH3A-203ENST00000557960 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
IDH3A-203ENST00000557960 KHSRPQ92945 711 aaKnown RBP eCLIP9.6□□□□□ -0.87
IDH3A-203ENST00000557960 MLLT3P42568 568 aaPredicted RBP9.59□□□□□ -0.87
IDH3A-203ENST00000557960 PTGER2P43116 358 aa9.59□□□□□ -0.87
IDH3A-203ENST00000557960 HOXB1P14653 301 aaPredicted RBP9.58□□□□□ -0.88
IDH3A-203ENST00000557960 NUDT7P0C024 238 aa9.57□□□□□ -0.88
IDH3A-203ENST00000557960 ZNF316A6NFI3 1004 aaPredicted RBP9.56□□□□□ -0.88
IDH3A-203ENST00000557960 ST18O60284 1047 aa9.54□□□□□ -0.88
IDH3A-203ENST00000557960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.54□□□□□ -0.88
IDH3A-203ENST00000557960 SMYD5Q6GMV2 418 aa9.53□□□□□ -0.88
IDH3A-203ENST00000557960 DDX12PQ92771 950 aa9.53□□□□□ -0.88
IDH3A-203ENST00000557960 GRXCR2A6NFK2 248 aa9.52□□□□□ -0.89
IDH3A-203ENST00000557960 OSBPP22059 807 aa9.51□□□□□ -0.89
IDH3A-203ENST00000557960 LHX6Q9UPM6 363 aa9.51□□□□□ -0.89
IDH3A-203ENST00000557960 TULP1O00294 542 aaPredicted RBP9.5□□□□□ -0.89
IDH3A-203ENST00000557960 PHF14O94880 888 aa9.5□□□□□ -0.89
IDH3A-203ENST00000557960 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
IDH3A-203ENST00000557960 FAM163AQ96GL9 167 aaPredicted RBP9.5□□□□□ -0.89
IDH3A-203ENST00000557960 FOSBP53539 338 aa9.49□□□□□ -0.89
IDH3A-203ENST00000557960 LMOD2Q6P5Q4 547 aa9.49□□□□□ -0.89
IDH3A-203ENST00000557960 JPH4Q96JJ6 628 aa9.49□□□□□ -0.89
IDH3A-203ENST00000557960 PCDHGA10Q9Y5H3 936 aa9.49□□□□□ -0.89
IDH3A-203ENST00000557960 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
IDH3A-203ENST00000557960 RBM26Q5T8P6 1007 aaKnown RBP9.48□□□□□ -0.89
IDH3A-203ENST00000557960 EPAS1Q99814 870 aa9.47□□□□□ -0.89
IDH3A-203ENST00000557960 ZNF454Q8N9F8 522 aa9.45□□□□□ -0.9
IDH3A-203ENST00000557960 MARVELD3Q96A59 401 aa9.45□□□□□ -0.9
IDH3A-203ENST00000557960 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
IDH3A-203ENST00000557960 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
IDH3A-203ENST00000557960 FBXW7Q969H0 707 aa9.44□□□□□ -0.9
IDH3A-203ENST00000557960 EN1Q05925 392 aaPredicted RBP9.43□□□□□ -0.9
IDH3A-203ENST00000557960 ZDHHC16Q969W1 377 aa9.43□□□□□ -0.9
IDH3A-203ENST00000557960 EMP3P54852 163 aa9.42□□□□□ -0.9
IDH3A-203ENST00000557960 ERBB3P21860 1342 aa9.41□□□□□ -0.9
IDH3A-203ENST00000557960 PPP4R3BQ5MIZ7 849 aa9.41□□□□□ -0.9
IDH3A-203ENST00000557960 ADAM33Q9BZ11 813 aa9.41□□□□□ -0.9
IDH3A-203ENST00000557960 RBM33Q96EV2 1170 aaKnown RBP9.4□□□□□ -0.9
IDH3A-203ENST00000557960 VARS2Q5ST30 1063 aaKnown RBP9.39□□□□□ -0.91
IDH3A-203ENST00000557960 GPR37O15354 613 aa9.38□□□□□ -0.91
IDH3A-203ENST00000557960 MAP3K7O43318 606 aa9.38□□□□□ -0.91
IDH3A-203ENST00000557960 TSR1Q2NL82 804 aaKnown RBP9.38□□□□□ -0.91
IDH3A-203ENST00000557960 TPRNQ4KMQ1 711 aa9.38□□□□□ -0.91
IDH3A-203ENST00000557960 GPIHBP1Q8IV16 184 aa9.38□□□□□ -0.91
IDH3A-203ENST00000557960 ZC3H15Q8WU90 426 aaKnown RBP9.38□□□□□ -0.91
IDH3A-203ENST00000557960 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
IDH3A-203ENST00000557960 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
IDH3A-203ENST00000557960 NUTM2FA1L443 756 aa9.37□□□□□ -0.91
IDH3A-203ENST00000557960 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms