RNA–Protein interactions for RNA: ENST00000557813.2

CGNL1-202, Transcript of cingulin like 1, humanhuman

TSL 1 (best)

Gene CGNL1, Length 915 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1-202ENST00000557813 E2F4Q16254 413 aa11.73□□□□□ -0.53
CGNL1-202ENST00000557813 SLC39A7Q92504 469 aa11.73□□□□□ -0.53
CGNL1-202ENST00000557813 SEC24BO95487 1268 aa11.72□□□□□ -0.53
CGNL1-202ENST00000557813 PRKCSHP14314 528 aaPredicted RBP11.72□□□□□ -0.53
CGNL1-202ENST00000557813 DDX27Q96GQ7 796 aaKnown RBP11.72□□□□□ -0.53
CGNL1-202ENST00000557813 GPHNQ9NQX3 736 aaPredicted RBP11.72□□□□□ -0.53
CGNL1-202ENST00000557813 C7P10643 843 aa11.7□□□□□ -0.54
CGNL1-202ENST00000557813 METRNQ9UJH8 293 aa11.69□□□□□ -0.54
CGNL1-202ENST00000557813 CAMK2BQ13554 666 aa11.67□□□□□ -0.54
CGNL1-202ENST00000557813 ARHGEF1Q92888 912 aaKnown RBP11.67□□□□□ -0.54
CGNL1-202ENST00000557813 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
CGNL1-202ENST00000557813 DSG2Q14126 1118 aa11.66□□□□□ -0.54
CGNL1-202ENST00000557813 PPP1R15BQ5SWA1 713 aa11.66□□□□□ -0.54
CGNL1-202ENST00000557813 TMEM92Q6UXU6 159 aa11.66□□□□□ -0.54
CGNL1-202ENST00000557813 KIF3CO14782 793 aa11.65□□□□□ -0.54
CGNL1-202ENST00000557813 C2orf72A6NCS6 295 aa11.64□□□□□ -0.55
CGNL1-202ENST00000557813 TPRNQ4KMQ1 711 aa11.64□□□□□ -0.55
CGNL1-202ENST00000557813 FOXK1P85037 733 aa11.63□□□□□ -0.55
CGNL1-202ENST00000557813 G3V3G9 751 aa11.62□□□□□ -0.55
CGNL1-202ENST00000557813 TMC2Q8TDI7 906 aa11.62□□□□□ -0.55
CGNL1-202ENST00000557813 ARIH1Q9Y4X5 557 aaPredicted RBP11.6□□□□□ -0.55
CGNL1-202ENST00000557813 EMILIN3Q9NT22 766 aa11.59□□□□□ -0.55
CGNL1-202ENST00000557813 PLPP6Q8IY26 295 aa11.58□□□□□ -0.56
CGNL1-202ENST00000557813 SEMA3EO15041 775 aa11.57□□□□□ -0.56
CGNL1-202ENST00000557813 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.57
CGNL1-202ENST00000557813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.52□□□□□ -0.57
CGNL1-202ENST00000557813 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
CGNL1-202ENST00000557813 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
CGNL1-202ENST00000557813 DPYSL4O14531 572 aa11.5□□□□□ -0.57
CGNL1-202ENST00000557813 C3orf67Q6ZVT6 689 aa11.48□□□□□ -0.57
CGNL1-202ENST00000557813 LMOD2Q6P5Q4 547 aa11.47□□□□□ -0.57
CGNL1-202ENST00000557813 MLLT3P42568 568 aaPredicted RBP11.44□□□□□ -0.58
CGNL1-202ENST00000557813 OXER1Q8TDS5 423 aa11.43□□□□□ -0.58
CGNL1-202ENST00000557813 UPF1Q92900 1129 aaKnown RBP eCLIP11.43□□□□□ -0.58
CGNL1-202ENST00000557813 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.43□□□□□ -0.58
CGNL1-202ENST00000557813 PDIA6Q15084 440 aa11.42□□□□□ -0.58
CGNL1-202ENST00000557813 SPDYE16A6NNV3 312 aaPredicted RBP11.4□□□□□ -0.58
CGNL1-202ENST00000557813 MAP3K9P80192 1104 aa11.4□□□□□ -0.58
CGNL1-202ENST00000557813 PTCD2Q8WV60 388 aaKnown RBP11.37□□□□□ -0.59
CGNL1-202ENST00000557813 TULP1O00294 542 aaPredicted RBP11.35□□□□□ -0.59
CGNL1-202ENST00000557813 SLC34A2O95436 690 aa11.35□□□□□ -0.59
CGNL1-202ENST00000557813 SMYD5Q6GMV2 418 aa11.35□□□□□ -0.59
CGNL1-202ENST00000557813 RBM26Q5T8P6 1007 aaKnown RBP11.34□□□□□ -0.59
CGNL1-202ENST00000557813 ZC3H15Q8WU90 426 aaKnown RBP11.34□□□□□ -0.59
CGNL1-202ENST00000557813 EVI5O60447 810 aa11.31□□□□□ -0.6
CGNL1-202ENST00000557813 TBC1D12O60347 775 aa11.3□□□□□ -0.6
CGNL1-202ENST00000557813 GRXCR2A6NFK2 248 aa11.29□□□□□ -0.6
CGNL1-202ENST00000557813 PTGER2P43116 358 aa11.29□□□□□ -0.6
CGNL1-202ENST00000557813 SLAIN1Q8ND83 568 aa11.28□□□□□ -0.6
CGNL1-202ENST00000557813 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
CGNL1-202ENST00000557813 DDX12PQ92771 950 aa11.27□□□□□ -0.61
CGNL1-202ENST00000557813 ANO8Q9HCE9 1232 aaPredicted RBP11.27□□□□□ -0.61
CGNL1-202ENST00000557813 PCDHGA4Q9Y5G9 962 aa11.27□□□□□ -0.61
CGNL1-202ENST00000557813 KDM4FA0A1W2PPD8 638 aa11.25□□□□□ -0.61
CGNL1-202ENST00000557813 OSBPP22059 807 aa11.25□□□□□ -0.61
CGNL1-202ENST00000557813 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
CGNL1-202ENST00000557813 SCUBE2Q9NQ36 999 aa11.25□□□□□ -0.61
CGNL1-202ENST00000557813 ZMYND10O75800 440 aa11.24□□□□□ -0.61
CGNL1-202ENST00000557813 MAMSTRQ6ZN01 415 aa11.23□□□□□ -0.61
CGNL1-202ENST00000557813 GPIHBP1Q8IV16 184 aa11.21□□□□□ -0.61
CGNL1-202ENST00000557813 KHSRPQ92945 711 aaKnown RBP eCLIP11.21□□□□□ -0.61
CGNL1-202ENST00000557813 GPR37O15354 613 aa11.2□□□□□ -0.62
CGNL1-202ENST00000557813 OTUD5Q96G74 571 aa11.19□□□□□ -0.62
CGNL1-202ENST00000557813 SLC24A3Q9HC58 644 aa11.19□□□□□ -0.62
CGNL1-202ENST00000557813 DOK7Q18PE1 504 aa11.18□□□□□ -0.62
CGNL1-202ENST00000557813 ARSIQ5FYB1 569 aa11.18□□□□□ -0.62
CGNL1-202ENST00000557813 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
CGNL1-202ENST00000557813 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
CGNL1-202ENST00000557813 PCDHGA10Q9Y5H3 936 aa11.15□□□□□ -0.62
CGNL1-202ENST00000557813 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
CGNL1-202ENST00000557813 NUDT7P0C024 238 aa11.14□□□□□ -0.63
CGNL1-202ENST00000557813 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
CGNL1-202ENST00000557813 PHF14O94880 888 aa11.13□□□□□ -0.63
CGNL1-202ENST00000557813 LHX8Q68G74 356 aa11.11□□□□□ -0.63
CGNL1-202ENST00000557813 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
CGNL1-202ENST00000557813 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
CGNL1-202ENST00000557813 EPAS1Q99814 870 aa11.1□□□□□ -0.63
CGNL1-202ENST00000557813 FECHP22830 423 aa11.09□□□□□ -0.63
CGNL1-202ENST00000557813 FOSBP53539 338 aa11.09□□□□□ -0.63
CGNL1-202ENST00000557813 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
CGNL1-202ENST00000557813 RIMBP2O15034 1052 aa11.08□□□□□ -0.64
CGNL1-202ENST00000557813 ZNF710Q8N1W2 664 aa11.08□□□□□ -0.64
CGNL1-202ENST00000557813 RBM33Q96EV2 1170 aaKnown RBP11.08□□□□□ -0.64
CGNL1-202ENST00000557813 JPH4Q96JJ6 628 aa11.08□□□□□ -0.64
CGNL1-202ENST00000557813 NPDC1Q9NQX5 325 aaPredicted RBP11.08□□□□□ -0.64
CGNL1-202ENST00000557813 PTGDRQ13258 359 aa11.07□□□□□ -0.64
CGNL1-202ENST00000557813 TSR1Q2NL82 804 aaKnown RBP11.06□□□□□ -0.64
CGNL1-202ENST00000557813 TYW1BQ6NUM6 668 aa11.06□□□□□ -0.64
CGNL1-202ENST00000557813 KRI1Q8N9T8 703 aaKnown RBP11.06□□□□□ -0.64
CGNL1-202ENST00000557813 LHX6Q9UPM6 363 aa11.06□□□□□ -0.64
CGNL1-202ENST00000557813 BRPF1P55201 1214 aaPredicted RBP11.05□□□□□ -0.64
CGNL1-202ENST00000557813 SNPHO15079 494 aa11.04□□□□□ -0.64
CGNL1-202ENST00000557813 FCHSD2O94868 740 aa11.04□□□□□ -0.64
CGNL1-202ENST00000557813 ZNF454Q8N9F8 522 aa11.04□□□□□ -0.64
CGNL1-202ENST00000557813 AK7Q96M32 723 aa11.04□□□□□ -0.64
CGNL1-202ENST00000557813 GNPATO15228 680 aa11.03□□□□□ -0.64
CGNL1-202ENST00000557813 MAP3K7O43318 606 aa11.03□□□□□ -0.64
CGNL1-202ENST00000557813 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
CGNL1-202ENST00000557813 HIC1Q14526 733 aa11.03□□□□□ -0.64
CGNL1-202ENST00000557813 FBXW7Q969H0 707 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms