RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 KHSRPQ92945 711 aaKnown RBP eCLIP12.65□□□□□ -0.38
FOXN3-217ENST00000557572 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
FOXN3-217ENST00000557572 HCSTQ9UBK5 93 aa12.59□□□□□ -0.39
FOXN3-217ENST00000557572 AXIN2Q9Y2T1 843 aa12.54□□□□□ -0.4
FOXN3-217ENST00000557572 PBX2P40425 430 aa12.53□□□□□ -0.4
FOXN3-217ENST00000557572 SOX12O15370 315 aa12.52□□□□□ -0.41
FOXN3-217ENST00000557572 MS4A4AQ96JQ5 239 aa12.52□□□□□ -0.41
FOXN3-217ENST00000557572 NUDT7P0C024 238 aa12.49□□□□□ -0.41
FOXN3-217ENST00000557572 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
FOXN3-217ENST00000557572 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
FOXN3-217ENST00000557572 POTEEQ6S8J3 1075 aa12.47□□□□□ -0.41
FOXN3-217ENST00000557572 LHX6Q9UPM6 363 aa12.45□□□□□ -0.42
FOXN3-217ENST00000557572 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
FOXN3-217ENST00000557572 ADGRD1Q6QNK2 874 aa12.41□□□□□ -0.42
FOXN3-217ENST00000557572 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.37□□□□□ -0.43
FOXN3-217ENST00000557572 ZFP91Q96JP5 570 aaPredicted RBP12.37□□□□□ -0.43
FOXN3-217ENST00000557572 ARHGAP33O14559 1287 aa12.35□□□□□ -0.43
FOXN3-217ENST00000557572 PCDHGA4Q9Y5G9 962 aa12.34□□□□□ -0.43
FOXN3-217ENST00000557572 C2orf72A6NCS6 295 aa12.33□□□□□ -0.44
FOXN3-217ENST00000557572 RIOK3O14730 519 aaKnown RBP12.33□□□□□ -0.44
FOXN3-217ENST00000557572 NLRP6P59044 892 aa12.32□□□□□ -0.44
FOXN3-217ENST00000557572 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
FOXN3-217ENST00000557572 KIF3CO14782 793 aa12.29□□□□□ -0.44
FOXN3-217ENST00000557572 VGFO15240 615 aaPredicted RBP12.29□□□□□ -0.44
FOXN3-217ENST00000557572 IRX2Q9BZI1 471 aaPredicted RBP12.29□□□□□ -0.44
FOXN3-217ENST00000557572 STAC3Q96MF2 364 aa12.27□□□□□ -0.45
FOXN3-217ENST00000557572 TK2O00142 265 aa12.26□□□□□ -0.45
FOXN3-217ENST00000557572 HRO43593 1189 aa12.26□□□□□ -0.45
FOXN3-217ENST00000557572 SLC34A2O95436 690 aa12.26□□□□□ -0.45
FOXN3-217ENST00000557572 RNF25Q96BH1 459 aaPredicted RBP12.26□□□□□ -0.45
FOXN3-217ENST00000557572 DMRTA1Q5VZB9 504 aa12.25□□□□□ -0.45
FOXN3-217ENST00000557572 PSDA5PKW4 1024 aaPredicted RBP12.24□□□□□ -0.45
FOXN3-217ENST00000557572 FBXO22Q8NEZ5 403 aa12.24□□□□□ -0.45
FOXN3-217ENST00000557572 PSEN2P49810 448 aa12.23□□□□□ -0.45
FOXN3-217ENST00000557572 RGS20O76081 388 aa12.21□□□□□ -0.45
FOXN3-217ENST00000557572 PTPN5P54829 565 aa12.21□□□□□ -0.45
FOXN3-217ENST00000557572 TMC2Q8TDI7 906 aa12.18□□□□□ -0.46
FOXN3-217ENST00000557572 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
FOXN3-217ENST00000557572 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
FOXN3-217ENST00000557572 STK24Q9Y6E0 443 aa12.13□□□□□ -0.47
FOXN3-217ENST00000557572 PPP4R3BQ5MIZ7 849 aa12.09□□□□□ -0.47
FOXN3-217ENST00000557572 IFFO2Q5TF58 517 aa12.09□□□□□ -0.47
FOXN3-217ENST00000557572 A0A0G2JS52 829 aa12.07□□□□□ -0.48
FOXN3-217ENST00000557572 KDM4FA0A1W2PPD8 638 aa12.07□□□□□ -0.48
FOXN3-217ENST00000557572 KCNH8Q96L42 1107 aa12.07□□□□□ -0.48
FOXN3-217ENST00000557572 KCNK17Q96T54 332 aa12.06□□□□□ -0.48
FOXN3-217ENST00000557572 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
FOXN3-217ENST00000557572 PTCD2Q8WV60 388 aaKnown RBP12.04□□□□□ -0.48
FOXN3-217ENST00000557572 VPS9D1Q9Y2B5 631 aa12.03□□□□□ -0.48
FOXN3-217ENST00000557572 Q6ZNB5 142 aa12.01□□□□□ -0.49
FOXN3-217ENST00000557572 STK25O00506 426 aa12□□□□□ -0.49
FOXN3-217ENST00000557572 THSD4Q6ZMP0 1018 aa11.99□□□□□ -0.49
FOXN3-217ENST00000557572 GOLGA8CPA6NN73 597 aa11.98□□□□□ -0.49
FOXN3-217ENST00000557572 TBC1D12O60347 775 aa11.95□□□□□ -0.5
FOXN3-217ENST00000557572 WNT2BQ93097 391 aa11.94□□□□□ -0.5
FOXN3-217ENST00000557572 PLPP6Q8IY26 295 aa11.92□□□□□ -0.5
FOXN3-217ENST00000557572 PPP1R37O75864 691 aa11.9□□□□□ -0.5
FOXN3-217ENST00000557572 BHMG1C9JSJ3 638 aaPredicted RBP11.88□□□□□ -0.51
FOXN3-217ENST00000557572 FOXK1P85037 733 aa11.88□□□□□ -0.51
FOXN3-217ENST00000557572 MRPL50Q8N5N7 158 aaKnown RBP11.88□□□□□ -0.51
FOXN3-217ENST00000557572 SLC4A5Q9BY07 1137 aa11.87□□□□□ -0.51
FOXN3-217ENST00000557572 ZNF454Q8N9F8 522 aa11.86□□□□□ -0.51
FOXN3-217ENST00000557572 BCL2L12Q9HB09 334 aa11.83□□□□□ -0.52
FOXN3-217ENST00000557572 PTPREP23469 700 aa11.81□□□□□ -0.52
FOXN3-217ENST00000557572 DSG2Q14126 1118 aa11.81□□□□□ -0.52
FOXN3-217ENST00000557572 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
FOXN3-217ENST00000557572 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
FOXN3-217ENST00000557572 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
FOXN3-217ENST00000557572 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
FOXN3-217ENST00000557572 ITGBL1O95965 494 aaPredicted RBP11.75□□□□□ -0.53
FOXN3-217ENST00000557572 TRAF7Q6Q0C0 670 aa11.73□□□□□ -0.53
FOXN3-217ENST00000557572 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
FOXN3-217ENST00000557572 LAPTM4AQ15012 233 aa11.72□□□□□ -0.53
FOXN3-217ENST00000557572 FOSBP53539 338 aa11.71□□□□□ -0.53
FOXN3-217ENST00000557572 OXER1Q8TDS5 423 aa11.71□□□□□ -0.53
FOXN3-217ENST00000557572 ANKK1Q8NFD2 765 aa11.7□□□□□ -0.54
FOXN3-217ENST00000557572 LCE2BO14633 110 aa11.69□□□□□ -0.54
FOXN3-217ENST00000557572 GFRA3O60609 400 aa11.68□□□□□ -0.54
FOXN3-217ENST00000557572 BCAMP50895 628 aa11.66□□□□□ -0.54
FOXN3-217ENST00000557572 KCNC4Q03721 635 aa11.66□□□□□ -0.54
FOXN3-217ENST00000557572 ZDHHC16Q969W1 377 aa11.64□□□□□ -0.55
FOXN3-217ENST00000557572 ADAM33Q9BZ11 813 aa11.64□□□□□ -0.55
FOXN3-217ENST00000557572 RGL2O15211 777 aa11.62□□□□□ -0.55
FOXN3-217ENST00000557572 JPH4Q96JJ6 628 aa11.62□□□□□ -0.55
FOXN3-217ENST00000557572 RABGEF1Q9UJ41 708 aa11.6□□□□□ -0.55
FOXN3-217ENST00000557572 SOWAHBA6NEL2 793 aa11.59□□□□□ -0.55
FOXN3-217ENST00000557572 NYAP1Q6ZVC0 841 aa11.59□□□□□ -0.55
FOXN3-217ENST00000557572 PROX2Q3B8N5 592 aa11.58□□□□□ -0.56
FOXN3-217ENST00000557572 WBP1LQ9NX94 342 aa11.58□□□□□ -0.56
FOXN3-217ENST00000557572 ANO8Q9HCE9 1232 aaPredicted RBP11.57□□□□□ -0.56
FOXN3-217ENST00000557572 PPP1R3GB7ZBB8 358 aa11.55□□□□□ -0.56
FOXN3-217ENST00000557572 EVI5O60447 810 aa11.55□□□□□ -0.56
FOXN3-217ENST00000557572 ZNF787Q6DD87 383 aa11.54□□□□□ -0.56
FOXN3-217ENST00000557572 PPP1R15BQ5SWA1 713 aa11.53□□□□□ -0.56
FOXN3-217ENST00000557572 ZFRQ96KR1 1074 aaKnown RBP11.53□□□□□ -0.56
FOXN3-217ENST00000557572 LAPTM4BQ86VI4 370 aa11.52□□□□□ -0.57
FOXN3-217ENST00000557572 NRG2O14511 850 aaPredicted RBP11.51□□□□□ -0.57
FOXN3-217ENST00000557572 COL9A1P20849 921 aa11.49□□□□□ -0.57
FOXN3-217ENST00000557572 PRKD2Q9BZL6 878 aa11.49□□□□□ -0.57
FOXN3-217ENST00000557572 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms