RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 ITGAEP38570 1179 aa21.84■■□□□ 1.09
ARHGEF40-208ENST00000557498 DNMT1P26358 1616 aaKnown RBP21.82■■□□□ 1.08
ARHGEF40-208ENST00000557498 ARHGAP5Q13017 1502 aa21.81■■□□□ 1.08
ARHGEF40-208ENST00000557498 PLCH2O75038 1416 aa21.8■■□□□ 1.08
ARHGEF40-208ENST00000557498 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
ARHGEF40-208ENST00000557498 SAMD9LQ8IVG5 1584 aa21.8■■□□□ 1.08
ARHGEF40-208ENST00000557498 ZNF644Q9H582 1327 aaPredicted RBP21.8■■□□□ 1.08
ARHGEF40-208ENST00000557498 PTPRKQ15262 1439 aa21.78■■□□□ 1.08
ARHGEF40-208ENST00000557498 DAPK1P53355 1430 aa21.77■■□□□ 1.08
ARHGEF40-208ENST00000557498 ZNF777Q9ULD5 760 aaPredicted RBP21.76■■□□□ 1.07
ARHGEF40-208ENST00000557498 CROCC2H7BZ55 1655 aa21.75■■□□□ 1.07
ARHGEF40-208ENST00000557498 ABCC5O15440 1437 aa21.74■■□□□ 1.07
ARHGEF40-208ENST00000557498 ARHGEF5Q12774 1597 aa21.74■■□□□ 1.07
ARHGEF40-208ENST00000557498 PLEKHH2Q8IVE3 1493 aa21.72■■□□□ 1.07
ARHGEF40-208ENST00000557498 GLI2P10070 1586 aa21.71■■□□□ 1.07
ARHGEF40-208ENST00000557498 AKNAQ7Z591 1439 aa21.7■■□□□ 1.06
ARHGEF40-208ENST00000557498 ABCC1P33527 1531 aa21.7■■□□□ 1.06
ARHGEF40-208ENST00000557498 SYCP2Q9BX26 1530 aa21.7■■□□□ 1.06
ARHGEF40-208ENST00000557498 ADGBQ8N7X0 1667 aa21.69■■□□□ 1.06
ARHGEF40-208ENST00000557498 EFCAB2Q5VUJ9 269 aa21.69■■□□□ 1.06
ARHGEF40-208ENST00000557498 MBD5Q9P267 1494 aa21.69■■□□□ 1.06
ARHGEF40-208ENST00000557498 SHANK2Q9UPX8 1470 aa21.69■■□□□ 1.06
ARHGEF40-208ENST00000557498 DIP2BQ9P265 1576 aa21.69■■□□□ 1.06
ARHGEF40-208ENST00000557498 GCC2Q8IWJ2 1684 aa21.69■■□□□ 1.06
ARHGEF40-208ENST00000557498 HFM1A2PYH4 1435 aa21.68■■□□□ 1.06
ARHGEF40-208ENST00000557498 SETD5Q9C0A6 1442 aa21.68■■□□□ 1.06
ARHGEF40-208ENST00000557498 KIAA1107Q9UPP5 1409 aa21.68■■□□□ 1.06
ARHGEF40-208ENST00000557498 MAP3K4Q9Y6R4 1608 aa21.66■■□□□ 1.06
ARHGEF40-208ENST00000557498 CFAP74Q9C0B2 1584 aa21.66■■□□□ 1.06
ARHGEF40-208ENST00000557498 FANCAO15360 1455 aa21.66■■□□□ 1.06
ARHGEF40-208ENST00000557498 CCDC141Q6ZP82 1450 aa21.66■■□□□ 1.06
ARHGEF40-208ENST00000557498 CD109Q6YHK3 1445 aa21.66■■□□□ 1.06
ARHGEF40-208ENST00000557498 ROCK1Q13464 1354 aa21.65■■□□□ 1.06
ARHGEF40-208ENST00000557498 RAB3GAP2Q9H2M9 1393 aa21.64■■□□□ 1.06
ARHGEF40-208ENST00000557498 ADGRL2O95490 1459 aa21.64■■□□□ 1.05
ARHGEF40-208ENST00000557498 NAIPQ13075 1403 aa21.63■■□□□ 1.05
ARHGEF40-208ENST00000557498 ARHGEF12Q9NZN5 1544 aa21.62■■□□□ 1.05
ARHGEF40-208ENST00000557498 HNRNPMP52272 730 aaKnown RBP eCLIP21.62■■□□□ 1.05
ARHGEF40-208ENST00000557498 RSPH4AQ5TD94 716 aa21.62■■□□□ 1.05
ARHGEF40-208ENST00000557498 CHIC2Q9UKJ5 165 aa21.62■■□□□ 1.05
ARHGEF40-208ENST00000557498 MAST1Q9Y2H9 1570 aa21.61■■□□□ 1.05
ARHGEF40-208ENST00000557498 C9orf84Q5VXU9 1444 aa21.61■■□□□ 1.05
ARHGEF40-208ENST00000557498 DNAJC5Q9H3Z4 198 aa21.6■■□□□ 1.05
ARHGEF40-208ENST00000557498 ADGRL1O94910 1474 aa21.58■■□□□ 1.04
ARHGEF40-208ENST00000557498 RRP7BPQ9NSQ0 103 aa21.57■■□□□ 1.04
ARHGEF40-208ENST00000557498 HRCP23327 699 aa21.56■■□□□ 1.04
ARHGEF40-208ENST00000557498 ANKRD30AQ9BXX3 1397 aa21.56■■□□□ 1.04
ARHGEF40-208ENST00000557498 NEO1Q92859 1461 aa21.56■■□□□ 1.04
ARHGEF40-208ENST00000557498 NCOA1Q15788 1441 aa21.55■■□□□ 1.04
ARHGEF40-208ENST00000557498 KIF13AQ9H1H9 1805 aa21.55■■□□□ 1.04
ARHGEF40-208ENST00000557498 TSPY4P0CV99 314 aa21.55■■□□□ 1.04
ARHGEF40-208ENST00000557498 TSPY10P0CW01 314 aa21.55■■□□□ 1.04
ARHGEF40-208ENST00000557498 TRAPPC8Q9Y2L5 1435 aa21.55■■□□□ 1.04
ARHGEF40-208ENST00000557498 FAM69CQ0P6D2 419 aa21.54■■□□□ 1.04
ARHGEF40-208ENST00000557498 CCER1Q8TC90 406 aaPredicted RBP21.53■■□□□ 1.04
ARHGEF40-208ENST00000557498 SCAPERQ9BY12 1400 aa21.52■■□□□ 1.04
ARHGEF40-208ENST00000557498 PLXNC1O60486 1568 aa21.52■■□□□ 1.04
ARHGEF40-208ENST00000557498 KDM6BO15054 1643 aa21.51■■□□□ 1.03
ARHGEF40-208ENST00000557498 PPRC1Q5VV67 1664 aaKnown RBP21.51■■□□□ 1.03
ARHGEF40-208ENST00000557498 DHX57Q6P158 1386 aaKnown RBP21.5■■□□□ 1.03
ARHGEF40-208ENST00000557498 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
ARHGEF40-208ENST00000557498 ZFYVE16Q7Z3T8 1539 aa21.47■■□□□ 1.03
ARHGEF40-208ENST00000557498 TSPOAP1O95153 1857 aa21.47■■□□□ 1.03
ARHGEF40-208ENST00000557498 TEX14Q8IWB6 1497 aa21.46■■□□□ 1.03
ARHGEF40-208ENST00000557498 KIF15Q9NS87 1388 aa21.46■■□□□ 1.03
ARHGEF40-208ENST00000557498 RTEL1-TNFRSF6BF6WH68 1400 aa21.46■■□□□ 1.03
ARHGEF40-208ENST00000557498 POGZQ7Z3K3 1410 aa21.46■■□□□ 1.03
ARHGEF40-208ENST00000557498 ZNF518AQ6AHZ1 1483 aa21.45■■□□□ 1.03
ARHGEF40-208ENST00000557498 ATP7AQ04656 1500 aa21.44■■□□□ 1.02
ARHGEF40-208ENST00000557498 KDM5CP41229 1560 aa21.44■■□□□ 1.02
ARHGEF40-208ENST00000557498 SPAG9O60271 1321 aaKnown RBP21.43■■□□□ 1.02
ARHGEF40-208ENST00000557498 ANKRD50Q9ULJ7 1429 aa21.43■■□□□ 1.02
ARHGEF40-208ENST00000557498 AFAP1Q8N556 730 aa21.42■■□□□ 1.02
ARHGEF40-208ENST00000557498 ACIN1Q9UKV3 1341 aaKnown RBP21.42■■□□□ 1.02
ARHGEF40-208ENST00000557498 DENND4BO75064 1496 aaPredicted RBP21.41■■□□□ 1.02
ARHGEF40-208ENST00000557498 DUOX2Q9NRD8 1548 aa21.4■■□□□ 1.02
ARHGEF40-208ENST00000557498 RICTORQ6R327 1708 aa21.4■■□□□ 1.02
ARHGEF40-208ENST00000557498 ZEB1P37275 1124 aaPredicted RBP21.39■■□□□ 1.01
ARHGEF40-208ENST00000557498 HECW2Q9P2P5 1572 aa21.38■■□□□ 1.01
ARHGEF40-208ENST00000557498 KIDINS220Q9ULH0 1771 aa21.38■■□□□ 1.01
ARHGEF40-208ENST00000557498 CLSPNQ9HAW4 1339 aa21.37■■□□□ 1.01
ARHGEF40-208ENST00000557498 ERBINQ96RT1 1412 aa21.36■■□□□ 1.01
ARHGEF40-208ENST00000557498 FRMPD1Q5SYB0 1578 aa21.36■■□□□ 1.01
ARHGEF40-208ENST00000557498 MLH3Q9UHC1 1453 aa21.35■■□□□ 1.01
ARHGEF40-208ENST00000557498 TRIM52Q96A61 297 aa21.33■■□□□ 1.01
ARHGEF40-208ENST00000557498 UNC13BO14795 1591 aa21.31■■□□□ 1
ARHGEF40-208ENST00000557498 ZMYM4Q5VZL5 1548 aa21.31■■□□□ 1
ARHGEF40-208ENST00000557498 KDM5DQ9BY66 1539 aa21.31■■□□□ 1
ARHGEF40-208ENST00000557498 ABCA6Q8N139 1617 aa21.29■■□□□ 1
ARHGEF40-208ENST00000557498 RAPGEF3O95398 923 aa21.29■■□□□ 1
ARHGEF40-208ENST00000557498 MYT1LQ9UL68 1186 aa21.29■■□□□ 1
ARHGEF40-208ENST00000557498 EIF2AK4Q9P2K8 1649 aaKnown RBP21.29■■□□□ 1
ARHGEF40-208ENST00000557498 PZPP20742 1482 aa21.28■■□□□ 1
ARHGEF40-208ENST00000557498 DIP2CQ9Y2E4 1556 aa21.26■□□□□ 0.99
ARHGEF40-208ENST00000557498 MAGI2Q86UL8 1455 aa21.26■□□□□ 0.99
ARHGEF40-208ENST00000557498 A2MP01023 1474 aa21.25■□□□□ 0.99
ARHGEF40-208ENST00000557498 DHX29Q7Z478 1369 aaKnown RBP21.24■□□□□ 0.99
ARHGEF40-208ENST00000557498 MPHOSPH9Q99550 1183 aa21.24■□□□□ 0.99
ARHGEF40-208ENST00000557498 DEPDC5O75140 1603 aa21.23■□□□□ 0.99
ARHGEF40-208ENST00000557498 NUP155O75694 1391 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms