RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 PLCG2P16885 1265 aa10.32□□□□□ -0.76
PRPF39-212ENST00000557477 IRX5P78411 483 aaPredicted RBP10.32□□□□□ -0.76
PRPF39-212ENST00000557477 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
PRPF39-212ENST00000557477 POTEB2H3BUK9 544 aa10.31□□□□□ -0.76
PRPF39-212ENST00000557477 SEC24BO95487 1268 aa10.31□□□□□ -0.76
PRPF39-212ENST00000557477 SLC39A7Q92504 469 aa10.3□□□□□ -0.76
PRPF39-212ENST00000557477 MICALL2Q8IY33 904 aa10.29□□□□□ -0.76
PRPF39-212ENST00000557477 POTEFA5A3E0 1075 aa10.28□□□□□ -0.76
PRPF39-212ENST00000557477 C7P10643 843 aa10.27□□□□□ -0.77
PRPF39-212ENST00000557477 G3V3G9 751 aa10.26□□□□□ -0.77
PRPF39-212ENST00000557477 SEMA3EO15041 775 aa10.26□□□□□ -0.77
PRPF39-212ENST00000557477 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
PRPF39-212ENST00000557477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.26□□□□□ -0.77
PRPF39-212ENST00000557477 GPHNQ9NQX3 736 aaPredicted RBP10.26□□□□□ -0.77
PRPF39-212ENST00000557477 COLQQ9Y215 455 aaPredicted RBP10.26□□□□□ -0.77
PRPF39-212ENST00000557477 PPP1R15BQ5SWA1 713 aa10.25□□□□□ -0.77
PRPF39-212ENST00000557477 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
PRPF39-212ENST00000557477 POTEMA6NI47 508 aa10.24□□□□□ -0.77
PRPF39-212ENST00000557477 BOLA1Q9Y3E2 137 aa10.23□□□□□ -0.77
PRPF39-212ENST00000557477 TESPA1A2RU30 521 aaPredicted RBP10.22□□□□□ -0.77
PRPF39-212ENST00000557477 POTEJP0CG39 1038 aa10.22□□□□□ -0.77
PRPF39-212ENST00000557477 DSG2Q14126 1118 aa10.22□□□□□ -0.77
PRPF39-212ENST00000557477 TMEM121BQ9BXQ6 578 aaPredicted RBP10.22□□□□□ -0.77
PRPF39-212ENST00000557477 ARIH1Q9Y4X5 557 aaPredicted RBP10.22□□□□□ -0.77
PRPF39-212ENST00000557477 L3MBTL3Q96JM7 780 aaPredicted RBP10.21□□□□□ -0.77
PRPF39-212ENST00000557477 TMC2Q8TDI7 906 aa10.19□□□□□ -0.78
PRPF39-212ENST00000557477 PCDH10Q9P2E7 1040 aa10.19□□□□□ -0.78
PRPF39-212ENST00000557477 EMILIN3Q9NT22 766 aa10.18□□□□□ -0.78
PRPF39-212ENST00000557477 C2orf72A6NCS6 295 aa10.17□□□□□ -0.78
PRPF39-212ENST00000557477 TULP1O00294 542 aaPredicted RBP10.17□□□□□ -0.78
PRPF39-212ENST00000557477 POTEGQ6S5H5 508 aa10.17□□□□□ -0.78
PRPF39-212ENST00000557477 FOXK1P85037 733 aa10.16□□□□□ -0.78
PRPF39-212ENST00000557477 KIF3CO14782 793 aa10.15□□□□□ -0.78
PRPF39-212ENST00000557477 OTUD5Q96G74 571 aa10.15□□□□□ -0.78
PRPF39-212ENST00000557477 DPYSL4O14531 572 aa10.14□□□□□ -0.79
PRPF39-212ENST00000557477 TMEM92Q6UXU6 159 aa10.13□□□□□ -0.79
PRPF39-212ENST00000557477 PLPP6Q8IY26 295 aa10.13□□□□□ -0.79
PRPF39-212ENST00000557477 MLLT3P42568 568 aaPredicted RBP10.11□□□□□ -0.79
PRPF39-212ENST00000557477 C3orf67Q6ZVT6 689 aa10.1□□□□□ -0.79
PRPF39-212ENST00000557477 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
PRPF39-212ENST00000557477 PDIA6Q15084 440 aa10.08□□□□□ -0.8
PRPF39-212ENST00000557477 SMYD5Q6GMV2 418 aa10.08□□□□□ -0.8
PRPF39-212ENST00000557477 SPDYE16A6NNV3 312 aaPredicted RBP10.05□□□□□ -0.8
PRPF39-212ENST00000557477 RBM26Q5T8P6 1007 aaKnown RBP10.05□□□□□ -0.8
PRPF39-212ENST00000557477 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.04□□□□□ -0.8
PRPF39-212ENST00000557477 UPF1Q92900 1129 aaKnown RBP eCLIP10.03□□□□□ -0.8
PRPF39-212ENST00000557477 MAP3K9P80192 1104 aa10□□□□□ -0.81
PRPF39-212ENST00000557477 OXER1Q8TDS5 423 aa10□□□□□ -0.81
PRPF39-212ENST00000557477 SCUBE2Q9NQ36 999 aa10□□□□□ -0.81
PRPF39-212ENST00000557477 ZMYND10O75800 440 aa9.99□□□□□ -0.81
PRPF39-212ENST00000557477 SLC24A3Q9HC58 644 aa9.99□□□□□ -0.81
PRPF39-212ENST00000557477 GPIHBP1Q8IV16 184 aa9.98□□□□□ -0.81
PRPF39-212ENST00000557477 MAMSTRQ6ZN01 415 aa9.97□□□□□ -0.81
PRPF39-212ENST00000557477 GRXCR2A6NFK2 248 aa9.95□□□□□ -0.82
PRPF39-212ENST00000557477 BARGINQ6ZT62 677 aa9.94□□□□□ -0.82
PRPF39-212ENST00000557477 SLAIN1Q8ND83 568 aa9.94□□□□□ -0.82
PRPF39-212ENST00000557477 BRPF1P55201 1214 aaPredicted RBP9.93□□□□□ -0.82
PRPF39-212ENST00000557477 GPR37O15354 613 aa9.91□□□□□ -0.82
PRPF39-212ENST00000557477 EVI5O60447 810 aa9.91□□□□□ -0.82
PRPF39-212ENST00000557477 PTCD2Q8WV60 388 aaKnown RBP9.91□□□□□ -0.82
PRPF39-212ENST00000557477 DDX12PQ92771 950 aa9.91□□□□□ -0.82
PRPF39-212ENST00000557477 OSBPP22059 807 aa9.9□□□□□ -0.82
PRPF39-212ENST00000557477 TBC1D12O60347 775 aa9.89□□□□□ -0.83
PRPF39-212ENST00000557477 PTGER2P43116 358 aa9.89□□□□□ -0.83
PRPF39-212ENST00000557477 SLC34A2O95436 690 aa9.88□□□□□ -0.83
PRPF39-212ENST00000557477 PRIM1P49642 420 aaKnown RBP9.87□□□□□ -0.83
PRPF39-212ENST00000557477 NEUROD2Q15784 382 aa9.87□□□□□ -0.83
PRPF39-212ENST00000557477 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
PRPF39-212ENST00000557477 FAM163AQ96GL9 167 aaPredicted RBP9.86□□□□□ -0.83
PRPF39-212ENST00000557477 TMEM132AQ24JP5 1023 aa9.84□□□□□ -0.83
PRPF39-212ENST00000557477 KRI1Q8N9T8 703 aaKnown RBP9.84□□□□□ -0.83
PRPF39-212ENST00000557477 AK7Q96M32 723 aa9.84□□□□□ -0.83
PRPF39-212ENST00000557477 ZNF316A6NFI3 1004 aaPredicted RBP9.83□□□□□ -0.84
PRPF39-212ENST00000557477 LCE2DQ5TA82 110 aaPredicted RBP9.82□□□□□ -0.84
PRPF39-212ENST00000557477 ANO8Q9HCE9 1232 aaPredicted RBP9.82□□□□□ -0.84
PRPF39-212ENST00000557477 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
PRPF39-212ENST00000557477 DOK7Q18PE1 504 aa9.8□□□□□ -0.84
PRPF39-212ENST00000557477 TRIM66O15016 1216 aa9.78□□□□□ -0.84
PRPF39-212ENST00000557477 KDM4FA0A1W2PPD8 638 aa9.77□□□□□ -0.85
PRPF39-212ENST00000557477 RIMBP2O15034 1052 aa9.77□□□□□ -0.85
PRPF39-212ENST00000557477 FCHSD2O94868 740 aa9.77□□□□□ -0.85
PRPF39-212ENST00000557477 HOXB3P14651 431 aaPredicted RBP9.77□□□□□ -0.85
PRPF39-212ENST00000557477 FECHP22830 423 aa9.77□□□□□ -0.85
PRPF39-212ENST00000557477 GPBP1L1Q9HC44 474 aaPredicted RBP9.77□□□□□ -0.85
PRPF39-212ENST00000557477 GNPATO15228 680 aa9.76□□□□□ -0.85
PRPF39-212ENST00000557477 PHF14O94880 888 aa9.76□□□□□ -0.85
PRPF39-212ENST00000557477 MAP2K5Q13163 448 aa9.76□□□□□ -0.85
PRPF39-212ENST00000557477 PTGDRQ13258 359 aa9.76□□□□□ -0.85
PRPF39-212ENST00000557477 ZNF710Q8N1W2 664 aa9.76□□□□□ -0.85
PRPF39-212ENST00000557477 CDHR5Q9HBB8 845 aa9.76□□□□□ -0.85
PRPF39-212ENST00000557477 PCDHGA10Q9Y5H3 936 aa9.76□□□□□ -0.85
PRPF39-212ENST00000557477 EN1Q05925 392 aaPredicted RBP9.75□□□□□ -0.85
PRPF39-212ENST00000557477 HIC1Q14526 733 aa9.75□□□□□ -0.85
PRPF39-212ENST00000557477 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
PRPF39-212ENST00000557477 SNPHO15079 494 aa9.74□□□□□ -0.85
PRPF39-212ENST00000557477 PDE4DQ08499 809 aa9.74□□□□□ -0.85
PRPF39-212ENST00000557477 ARSIQ5FYB1 569 aa9.74□□□□□ -0.85
PRPF39-212ENST00000557477 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
PRPF39-212ENST00000557477 GTF3C3Q9Y5Q9 886 aa9.74□□□□□ -0.85
PRPF39-212ENST00000557477 MINK1Q8N4C8 1332 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms