RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 ARHGAP5Q13017 1502 aa16.77■□□□□ 0.27
HNRNPC-232ENST00000557442 RICTORQ6R327 1708 aa16.76■□□□□ 0.27
HNRNPC-232ENST00000557442 COL17A1Q9UMD9 1497 aaPredicted RBP16.75■□□□□ 0.27
HNRNPC-232ENST00000557442 MAP3K1Q13233 1512 aa16.75■□□□□ 0.27
HNRNPC-232ENST00000557442 PLCH2O75038 1416 aa16.75■□□□□ 0.27
HNRNPC-232ENST00000557442 FRMPD1Q5SYB0 1578 aa16.72■□□□□ 0.27
HNRNPC-232ENST00000557442 PHLDB1Q86UU1 1377 aa16.72■□□□□ 0.27
HNRNPC-232ENST00000557442 LRRC9Q6ZRR7 1453 aa16.71■□□□□ 0.27
HNRNPC-232ENST00000557442 AKNAQ7Z591 1439 aa16.7■□□□□ 0.26
HNRNPC-232ENST00000557442 ADGRL1O94910 1474 aa16.69■□□□□ 0.26
HNRNPC-232ENST00000557442 SAMD9LQ8IVG5 1584 aa16.67■□□□□ 0.26
HNRNPC-232ENST00000557442 ABCC1P33527 1531 aa16.67■□□□□ 0.26
HNRNPC-232ENST00000557442 GPATCH8Q9UKJ3 1502 aaKnown RBP16.67■□□□□ 0.26
HNRNPC-232ENST00000557442 NCOA2Q15596 1464 aa16.67■□□□□ 0.26
HNRNPC-232ENST00000557442 DENND4BO75064 1496 aaPredicted RBP16.66■□□□□ 0.26
HNRNPC-232ENST00000557442 CCNB3Q8WWL7 1395 aa16.66■□□□□ 0.26
HNRNPC-232ENST00000557442 APLP2Q06481 763 aa16.66■□□□□ 0.26
HNRNPC-232ENST00000557442 EFCAB2Q5VUJ9 269 aa16.65■□□□□ 0.26
HNRNPC-232ENST00000557442 ZMYM4Q5VZL5 1548 aa16.64■□□□□ 0.25
HNRNPC-232ENST00000557442 POGZQ7Z3K3 1410 aa16.63■□□□□ 0.25
HNRNPC-232ENST00000557442 SCAPERQ9BY12 1400 aa16.62■□□□□ 0.25
HNRNPC-232ENST00000557442 ARHGEF40Q8TER5 1519 aa16.61■□□□□ 0.25
HNRNPC-232ENST00000557442 SYCP2Q9BX26 1530 aa16.61■□□□□ 0.25
HNRNPC-232ENST00000557442 RAPGEF3O95398 923 aa16.61■□□□□ 0.25
HNRNPC-232ENST00000557442 KANK4Q5T7N3 995 aaPredicted RBP16.61■□□□□ 0.25
HNRNPC-232ENST00000557442 KDM5CP41229 1560 aa16.6■□□□□ 0.25
HNRNPC-232ENST00000557442 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
HNRNPC-232ENST00000557442 HECW2Q9P2P5 1572 aa16.59■□□□□ 0.25
HNRNPC-232ENST00000557442 ZFYVE16Q7Z3T8 1539 aa16.58■□□□□ 0.24
HNRNPC-232ENST00000557442 ARHGEF12Q9NZN5 1544 aa16.57■□□□□ 0.24
HNRNPC-232ENST00000557442 CFDP1Q9UEE9 299 aaPredicted RBP16.57■□□□□ 0.24
HNRNPC-232ENST00000557442 ZNF777Q9ULD5 760 aaPredicted RBP16.57■□□□□ 0.24
HNRNPC-232ENST00000557442 PLEKHH2Q8IVE3 1493 aa16.57■□□□□ 0.24
HNRNPC-232ENST00000557442 CAMSAP2Q08AD1 1489 aa16.55■□□□□ 0.24
HNRNPC-232ENST00000557442 KIDINS220Q9ULH0 1771 aa16.54■□□□□ 0.24
HNRNPC-232ENST00000557442 MYOM3Q5VTT5 1437 aa16.54■□□□□ 0.24
HNRNPC-232ENST00000557442 MAGI2Q86UL8 1455 aa16.54■□□□□ 0.24
HNRNPC-232ENST00000557442 ABCA6Q8N139 1617 aa16.53■□□□□ 0.24
HNRNPC-232ENST00000557442 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
HNRNPC-232ENST00000557442 SIGLEC1Q9BZZ2 1709 aa16.52■□□□□ 0.24
HNRNPC-232ENST00000557442 INO80Q9ULG1 1556 aaPredicted RBP16.52■□□□□ 0.24
HNRNPC-232ENST00000557442 PTPN23Q9H3S7 1636 aa16.52■□□□□ 0.24
HNRNPC-232ENST00000557442 KIAA1107Q9UPP5 1409 aa16.51■□□□□ 0.23
HNRNPC-232ENST00000557442 DIP2CQ9Y2E4 1556 aa16.51■□□□□ 0.23
HNRNPC-232ENST00000557442 YEATS2Q9ULM3 1422 aa16.5■□□□□ 0.23
HNRNPC-232ENST00000557442 CROCC2H7BZ55 1655 aa16.5■□□□□ 0.23
HNRNPC-232ENST00000557442 ARHGEF5Q12774 1597 aa16.49■□□□□ 0.23
HNRNPC-232ENST00000557442 ATP7AQ04656 1500 aa16.48■□□□□ 0.23
HNRNPC-232ENST00000557442 AFAP1Q8N556 730 aa16.48■□□□□ 0.23
HNRNPC-232ENST00000557442 ZNF644Q9H582 1327 aaPredicted RBP16.48■□□□□ 0.23
HNRNPC-232ENST00000557442 MIA2Q96PC5 1412 aa16.48■□□□□ 0.23
HNRNPC-232ENST00000557442 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
HNRNPC-232ENST00000557442 ADGBQ8N7X0 1667 aa16.47■□□□□ 0.23
HNRNPC-232ENST00000557442 BCORL1Q5H9F3 1711 aa16.47■□□□□ 0.23
HNRNPC-232ENST00000557442 HNRNPMP52272 730 aaKnown RBP eCLIP16.46■□□□□ 0.235e-7■■■■□ 19.9
HNRNPC-232ENST00000557442 CCDC141Q6ZP82 1450 aa16.46■□□□□ 0.23
HNRNPC-232ENST00000557442 MBD5Q9P267 1494 aa16.46■□□□□ 0.23
HNRNPC-232ENST00000557442 MYT1LQ9UL68 1186 aa16.45■□□□□ 0.22
HNRNPC-232ENST00000557442 FGD6Q6ZV73 1430 aa16.45■□□□□ 0.22
HNRNPC-232ENST00000557442 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
HNRNPC-232ENST00000557442 ATP10AO60312 1499 aa16.44■□□□□ 0.22
HNRNPC-232ENST00000557442 C9orf84Q5VXU9 1444 aa16.44■□□□□ 0.22
HNRNPC-232ENST00000557442 FER1L4A9Z1Z3 1794 aa16.43■□□□□ 0.22
HNRNPC-232ENST00000557442 DNMT1P26358 1616 aaKnown RBP16.43■□□□□ 0.22
HNRNPC-232ENST00000557442 ADAMTSL3P82987 1691 aa16.42■□□□□ 0.22
HNRNPC-232ENST00000557442 SPAG9O60271 1321 aaKnown RBP16.42■□□□□ 0.22
HNRNPC-232ENST00000557442 TCOF1Q13428 1488 aaKnown RBP16.41■□□□□ 0.22
HNRNPC-232ENST00000557442 MADDQ8WXG6 1647 aa16.41■□□□□ 0.22
HNRNPC-232ENST00000557442 MAST1Q9Y2H9 1570 aa16.41■□□□□ 0.22
HNRNPC-232ENST00000557442 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
HNRNPC-232ENST00000557442 RIMS1Q86UR5 1692 aaKnown RBP16.39■□□□□ 0.21
HNRNPC-232ENST00000557442 PLXNC1O60486 1568 aa16.38■□□□□ 0.21
HNRNPC-232ENST00000557442 ARID4BQ4LE39 1312 aaPredicted RBP16.38■□□□□ 0.21
HNRNPC-232ENST00000557442 RTEL1-TNFRSF6BF6WH68 1400 aa16.36■□□□□ 0.21
HNRNPC-232ENST00000557442 KDM4FA0A1W2PPD8 638 aa16.35■□□□□ 0.21
HNRNPC-232ENST00000557442 RSPH4AQ5TD94 716 aa16.35■□□□□ 0.21
HNRNPC-232ENST00000557442 AGLP35573 1532 aa16.35■□□□□ 0.21
HNRNPC-232ENST00000557442 SHANK2Q9UPX8 1470 aa16.34■□□□□ 0.21
HNRNPC-232ENST00000557442 A2MP01023 1474 aa16.34■□□□□ 0.21
HNRNPC-232ENST00000557442 DAPK1P53355 1430 aa16.33■□□□□ 0.21
HNRNPC-232ENST00000557442 ABCC5O15440 1437 aa16.32■□□□□ 0.2
HNRNPC-232ENST00000557442 TSPY4P0CV99 314 aa16.31■□□□□ 0.2
HNRNPC-232ENST00000557442 TSPY10P0CW01 314 aa16.31■□□□□ 0.2
HNRNPC-232ENST00000557442 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
HNRNPC-232ENST00000557442 EIF2AK4Q9P2K8 1649 aaKnown RBP16.29■□□□□ 0.2
HNRNPC-232ENST00000557442 MLECQ14165 292 aa16.29■□□□□ 0.2
HNRNPC-232ENST00000557442 CLTCQ00610 1675 aaKnown RBP16.28■□□□□ 0.2
HNRNPC-232ENST00000557442 MROH2AA6NES4 1674 aa16.26■□□□□ 0.19
HNRNPC-232ENST00000557442 RNF17Q9BXT8 1623 aaKnown RBP16.26■□□□□ 0.19
HNRNPC-232ENST00000557442 C3P01024 1663 aa16.25■□□□□ 0.19
HNRNPC-232ENST00000557442 PTPRMP28827 1452 aa16.25■□□□□ 0.19
HNRNPC-232ENST00000557442 DUOX2Q9NRD8 1548 aa16.25■□□□□ 0.19
HNRNPC-232ENST00000557442 RRBP1Q9P2E9 1410 aaKnown RBP16.25■□□□□ 0.19
HNRNPC-232ENST00000557442 DHX29Q7Z478 1369 aaKnown RBP16.24■□□□□ 0.19
HNRNPC-232ENST00000557442 ADGRL2O95490 1459 aa16.23■□□□□ 0.19
HNRNPC-232ENST00000557442 KIF15Q9NS87 1388 aa16.22■□□□□ 0.19
HNRNPC-232ENST00000557442 CEP152O94986 1710 aa16.22■□□□□ 0.19
HNRNPC-232ENST00000557442 MSH5O43196 834 aa16.21■□□□□ 0.19
HNRNPC-232ENST00000557442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.192e-10■□□□□ 8.9
HNRNPC-232ENST00000557442 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms