RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 KIF3CO14782 793 aa13.35□□□□□ -0.27
LINC00648-203ENST00000556923 GTPBP6O43824 516 aaPredicted RBP13.35□□□□□ -0.27
LINC00648-203ENST00000556923 C2orf72A6NCS6 295 aa13.34□□□□□ -0.27
LINC00648-203ENST00000556923 DOK7Q18PE1 504 aa13.32□□□□□ -0.28
LINC00648-203ENST00000556923 MARVELD3Q96A59 401 aa13.31□□□□□ -0.28
LINC00648-203ENST00000556923 ZNF710Q8N1W2 664 aa13.28□□□□□ -0.28
LINC00648-203ENST00000556923 TMC2Q8TDI7 906 aa13.28□□□□□ -0.28
LINC00648-203ENST00000556923 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
LINC00648-203ENST00000556923 HOXB1P14653 301 aaPredicted RBP13.24□□□□□ -0.29
LINC00648-203ENST00000556923 BBXQ8WY36 941 aaPredicted RBP13.24□□□□□ -0.29
LINC00648-203ENST00000556923 EMP3P54852 163 aa13.23□□□□□ -0.29
LINC00648-203ENST00000556923 ZSWIM6Q9HCJ5 1215 aa13.21□□□□□ -0.29
LINC00648-203ENST00000556923 GPHNQ9NQX3 736 aaPredicted RBP13.2□□□□□ -0.3
LINC00648-203ENST00000556923 GPR153Q6NV75 609 aa13.19□□□□□ -0.3
LINC00648-203ENST00000556923 PCDH10Q9P2E7 1040 aa13.19□□□□□ -0.3
LINC00648-203ENST00000556923 FOXK1P85037 733 aa13.17□□□□□ -0.3
LINC00648-203ENST00000556923 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
LINC00648-203ENST00000556923 CRISPLD2Q9H0B8 497 aa13.16□□□□□ -0.3
LINC00648-203ENST00000556923 POTEB3A0JP26 581 aa13.15□□□□□ -0.3
LINC00648-203ENST00000556923 FAM205CA6NFA0 338 aa13.15□□□□□ -0.3
LINC00648-203ENST00000556923 DSG2Q14126 1118 aa13.15□□□□□ -0.3
LINC00648-203ENST00000556923 ARSIQ5FYB1 569 aa13.15□□□□□ -0.3
LINC00648-203ENST00000556923 POTEBQ6S5H4 581 aa13.15□□□□□ -0.3
LINC00648-203ENST00000556923 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
LINC00648-203ENST00000556923 SLC34A2O95436 690 aa13.13□□□□□ -0.31
LINC00648-203ENST00000556923 PLPP6Q8IY26 295 aa13.13□□□□□ -0.31
LINC00648-203ENST00000556923 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00648-203ENST00000556923 HS3ST6Q96QI5 342 aa13.13□□□□□ -0.31
LINC00648-203ENST00000556923 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.1□□□□□ -0.31
LINC00648-203ENST00000556923 CADPS2Q86UW7 1296 aa13.09□□□□□ -0.31
LINC00648-203ENST00000556923 PCDHGA4Q9Y5G9 962 aa13.09□□□□□ -0.31
LINC00648-203ENST00000556923 ERBB3P21860 1342 aa13.09□□□□□ -0.31
LINC00648-203ENST00000556923 PDE4AP27815 886 aa13.07□□□□□ -0.32
LINC00648-203ENST00000556923 SPRYD3Q8NCJ5 442 aa13.07□□□□□ -0.32
LINC00648-203ENST00000556923 PPP1R15BQ5SWA1 713 aa13.05□□□□□ -0.32
LINC00648-203ENST00000556923 NUDT7P0C024 238 aa13.04□□□□□ -0.32
LINC00648-203ENST00000556923 VARS2Q5ST30 1063 aaKnown RBP13.04□□□□□ -0.32
LINC00648-203ENST00000556923 PTCD2Q8WV60 388 aaKnown RBP13.04□□□□□ -0.32
LINC00648-203ENST00000556923 LARP6Q9BRS8 491 aaKnown RBP13.04□□□□□ -0.32
LINC00648-203ENST00000556923 PAXIP1Q6ZW49 1069 aaPredicted RBP13.03□□□□□ -0.32
LINC00648-203ENST00000556923 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
LINC00648-203ENST00000556923 PLSCR2Q9NRY7 297 aa13.01□□□□□ -0.33
LINC00648-203ENST00000556923 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
LINC00648-203ENST00000556923 MFSD10Q14728 455 aa13□□□□□ -0.33
LINC00648-203ENST00000556923 DDX27Q96GQ7 796 aaKnown RBP13□□□□□ -0.33
LINC00648-203ENST00000556923 KRTAP3-3Q9BYR6 98 aa12.98□□□□□ -0.33
LINC00648-203ENST00000556923 KRTAP3-2Q9BYR7 98 aa12.98□□□□□ -0.33
LINC00648-203ENST00000556923 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
LINC00648-203ENST00000556923 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
LINC00648-203ENST00000556923 LHX6Q9UPM6 363 aa12.96□□□□□ -0.33
LINC00648-203ENST00000556923 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC00648-203ENST00000556923 TBC1D12O60347 775 aa12.93□□□□□ -0.34
LINC00648-203ENST00000556923 ZNF687Q8N1G0 1237 aa12.93□□□□□ -0.34
LINC00648-203ENST00000556923 EMILIN3Q9NT22 766 aa12.88□□□□□ -0.35
LINC00648-203ENST00000556923 SPNS2Q8IVW8 549 aa12.84□□□□□ -0.35
LINC00648-203ENST00000556923 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
LINC00648-203ENST00000556923 CAMK2BQ13554 666 aa12.82□□□□□ -0.36
LINC00648-203ENST00000556923 POTEEQ6S8J3 1075 aa12.81□□□□□ -0.36
LINC00648-203ENST00000556923 MAP3K9P80192 1104 aa12.8□□□□□ -0.36
LINC00648-203ENST00000556923 EVI5O60447 810 aa12.79□□□□□ -0.36
LINC00648-203ENST00000556923 ANO8Q9HCE9 1232 aaPredicted RBP12.78□□□□□ -0.36
LINC00648-203ENST00000556923 AXIN2Q9Y2T1 843 aa12.77□□□□□ -0.37
LINC00648-203ENST00000556923 PBX2P40425 430 aa12.76□□□□□ -0.37
LINC00648-203ENST00000556923 PPP4R3BQ5MIZ7 849 aa12.76□□□□□ -0.37
LINC00648-203ENST00000556923 TSHZ2Q9NRE2 1034 aa12.76□□□□□ -0.37
LINC00648-203ENST00000556923 MMRN1Q13201 1228 aa12.75□□□□□ -0.37
LINC00648-203ENST00000556923 DPYSL4O14531 572 aa12.73□□□□□ -0.37
LINC00648-203ENST00000556923 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC00648-203ENST00000556923 ZNF454Q8N9F8 522 aa12.73□□□□□ -0.37
LINC00648-203ENST00000556923 FOSBP53539 338 aa12.71□□□□□ -0.37
LINC00648-203ENST00000556923 ANKRD13DQ6ZTN6 518 aa12.71□□□□□ -0.37
LINC00648-203ENST00000556923 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
LINC00648-203ENST00000556923 ARHGAP33O14559 1287 aa12.7□□□□□ -0.38
LINC00648-203ENST00000556923 E2F4Q16254 413 aa12.69□□□□□ -0.38
LINC00648-203ENST00000556923 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
LINC00648-203ENST00000556923 PSEN2P49810 448 aa12.68□□□□□ -0.38
LINC00648-203ENST00000556923 PLCB2Q00722 1185 aa12.67□□□□□ -0.38
LINC00648-203ENST00000556923 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
LINC00648-203ENST00000556923 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
LINC00648-203ENST00000556923 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
LINC00648-203ENST00000556923 ZDHHC16Q969W1 377 aa12.63□□□□□ -0.39
LINC00648-203ENST00000556923 PCDHGA10Q9Y5H3 936 aa12.63□□□□□ -0.39
LINC00648-203ENST00000556923 ADAM33Q9BZ11 813 aa12.62□□□□□ -0.39
LINC00648-203ENST00000556923 PDIA6Q15084 440 aa12.61□□□□□ -0.39
LINC00648-203ENST00000556923 ADGRD1Q6QNK2 874 aa12.6□□□□□ -0.39
LINC00648-203ENST00000556923 ARIH1Q9Y4X5 557 aaPredicted RBP12.6□□□□□ -0.39
LINC00648-203ENST00000556923 PHF14O94880 888 aa12.59□□□□□ -0.39
LINC00648-203ENST00000556923 PTGER2P43116 358 aa12.59□□□□□ -0.39
LINC00648-203ENST00000556923 MYT1LQ9UL68 1186 aa12.59□□□□□ -0.39
LINC00648-203ENST00000556923 KCNH8Q96L42 1107 aa12.58□□□□□ -0.4
LINC00648-203ENST00000556923 TK2O00142 265 aa12.57□□□□□ -0.4
LINC00648-203ENST00000556923 PTPREP23469 700 aa12.57□□□□□ -0.4
LINC00648-203ENST00000556923 SPDYE16A6NNV3 312 aaPredicted RBP12.56□□□□□ -0.4
LINC00648-203ENST00000556923 TYW1BQ6NUM6 668 aa12.56□□□□□ -0.4
LINC00648-203ENST00000556923 DDX12PQ92771 950 aa12.56□□□□□ -0.4
LINC00648-203ENST00000556923 RNF166Q96A37 237 aaPredicted RBP12.55□□□□□ -0.4
LINC00648-203ENST00000556923 FBXW7Q969H0 707 aa12.54□□□□□ -0.4
LINC00648-203ENST00000556923 HRO43593 1189 aa12.53□□□□□ -0.4
LINC00648-203ENST00000556923 EPAS1Q99814 870 aa12.53□□□□□ -0.4
LINC00648-203ENST00000556923 KCNV2Q8TDN2 545 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms