RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 MLECQ14165 292 aa24.45■■□□□ 1.5
CHD8-211ENST00000556833 FMN1Q68DA7 1419 aa24.44■■□□□ 1.5
CHD8-211ENST00000556833 PCF11O94913 1555 aaKnown RBP24.44■■□□□ 1.5
CHD8-211ENST00000556833 SCAPERQ9BY12 1400 aa24.44■■□□□ 1.5
CHD8-211ENST00000556833 PLCH2O75038 1416 aa24.42■■□□□ 1.5
CHD8-211ENST00000556833 POGZQ7Z3K3 1410 aa24.41■■□□□ 1.5
CHD8-211ENST00000556833 LMTK3Q96Q04 1460 aa24.4■■□□□ 1.5
CHD8-211ENST00000556833 FER1L4A9Z1Z3 1794 aa24.4■■□□□ 1.5
CHD8-211ENST00000556833 ARHGAP5Q13017 1502 aa24.35■■□□□ 1.49
CHD8-211ENST00000556833 HSPA2P54652 639 aa24.35■■□□□ 1.49
CHD8-211ENST00000556833 MAGI2Q86UL8 1455 aa24.33■■□□□ 1.49
CHD8-211ENST00000556833 TROQ12816 1431 aaPredicted RBP24.33■■□□□ 1.49
CHD8-211ENST00000556833 EFCAB2Q5VUJ9 269 aa24.32■■□□□ 1.48
CHD8-211ENST00000556833 CDK11AQ9UQ88 783 aaPredicted RBP24.32■■□□□ 1.48
CHD8-211ENST00000556833 MYT1LQ9UL68 1186 aa24.3■■□□□ 1.48
CHD8-211ENST00000556833 CLIP1P30622 1438 aa24.29■■□□□ 1.48
CHD8-211ENST00000556833 CDC42BPBQ9Y5S2 1711 aa24.29■■□□□ 1.48
CHD8-211ENST00000556833 C9orf84Q5VXU9 1444 aa24.27■■□□□ 1.48
CHD8-211ENST00000556833 ATP10AO60312 1499 aa24.27■■□□□ 1.48
CHD8-211ENST00000556833 AFAP1Q8N556 730 aa24.25■■□□□ 1.47
CHD8-211ENST00000556833 ZNF518AQ6AHZ1 1483 aa24.24■■□□□ 1.47
CHD8-211ENST00000556833 FBXO41Q8TF61 875 aa24.23■■□□□ 1.47
CHD8-211ENST00000556833 ARHGEF12Q9NZN5 1544 aa24.23■■□□□ 1.47
CHD8-211ENST00000556833 PREX2Q70Z35 1606 aa24.23■■□□□ 1.47
CHD8-211ENST00000556833 KDM5CP41229 1560 aa24.21■■□□□ 1.47
CHD8-211ENST00000556833 CEBPAP49715 358 aaPredicted RBP24.21■■□□□ 1.47
CHD8-211ENST00000556833 ABCA6Q8N139 1617 aa24.21■■□□□ 1.47
CHD8-211ENST00000556833 DIP2CQ9Y2E4 1556 aa24.2■■□□□ 1.47
CHD8-211ENST00000556833 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
CHD8-211ENST00000556833 CDC42BPAQ5VT25 1732 aa24.18■■□□□ 1.46
CHD8-211ENST00000556833 ITSN2Q9NZM3 1697 aa24.18■■□□□ 1.46
CHD8-211ENST00000556833 CCDC18Q5T9S5 1454 aa24.18■■□□□ 1.46
CHD8-211ENST00000556833 ABCC1P33527 1531 aa24.16■■□□□ 1.46
CHD8-211ENST00000556833 PREX1Q8TCU6 1659 aa24.16■■□□□ 1.46
CHD8-211ENST00000556833 TRAPPC8Q9Y2L5 1435 aa24.15■■□□□ 1.46
CHD8-211ENST00000556833 FYCO1Q9BQS8 1478 aa24.11■■□□□ 1.45
CHD8-211ENST00000556833 ZNF777Q9ULD5 760 aaPredicted RBP24.1■■□□□ 1.45
CHD8-211ENST00000556833 KIDINS220Q9ULH0 1771 aa24.08■■□□□ 1.45
CHD8-211ENST00000556833 C3P01024 1663 aa24.08■■□□□ 1.44
CHD8-211ENST00000556833 MLH3Q9UHC1 1453 aa24.07■■□□□ 1.44
CHD8-211ENST00000556833 SAMD9LQ8IVG5 1584 aa24.06■■□□□ 1.44
CHD8-211ENST00000556833 SYCP2Q9BX26 1530 aa24.05■■□□□ 1.44
CHD8-211ENST00000556833 REREQ9P2R6 1566 aa24.05■■□□□ 1.44
CHD8-211ENST00000556833 STRCQ7RTU9 1775 aa24.03■■□□□ 1.44
CHD8-211ENST00000556833 UHRF1BP1Q6BDS2 1440 aa24.01■■□□□ 1.43
CHD8-211ENST00000556833 SUPT6HQ7KZ85 1726 aaKnown RBP24.01■■□□□ 1.43
CHD8-211ENST00000556833 ESF1Q9H501 851 aaKnown RBP24■■□□□ 1.43
CHD8-211ENST00000556833 HNRNPMP52272 730 aaKnown RBP eCLIP23.98■■□□□ 1.43
CHD8-211ENST00000556833 CERKQ8TCT0 537 aa23.98■■□□□ 1.43
CHD8-211ENST00000556833 AGLP35573 1532 aa23.98■■□□□ 1.43
CHD8-211ENST00000556833 GPATCH8Q9UKJ3 1502 aaKnown RBP23.98■■□□□ 1.43
CHD8-211ENST00000556833 SETD1BQ9UPS6 1966 aaKnown RBP23.97■■□□□ 1.43
CHD8-211ENST00000556833 SPAG9O60271 1321 aaKnown RBP23.93■■□□□ 1.42
CHD8-211ENST00000556833 ATP7AQ04656 1500 aa23.92■■□□□ 1.42
CHD8-211ENST00000556833 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
CHD8-211ENST00000556833 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
CHD8-211ENST00000556833 CFDP1Q9UEE9 299 aaPredicted RBP23.91■■□□□ 1.42
CHD8-211ENST00000556833 CLTCQ00610 1675 aaKnown RBP23.89■■□□□ 1.42
CHD8-211ENST00000556833 INO80Q9ULG1 1556 aaPredicted RBP23.89■■□□□ 1.41
CHD8-211ENST00000556833 TIAM1Q13009 1591 aa23.87■■□□□ 1.41
CHD8-211ENST00000556833 MROH2AA6NES4 1674 aa23.86■■□□□ 1.41
CHD8-211ENST00000556833 ZNF644Q9H582 1327 aaPredicted RBP23.85■■□□□ 1.41
CHD8-211ENST00000556833 CNTLNQ9NXG0 1405 aa23.84■■□□□ 1.41
CHD8-211ENST00000556833 PLXNC1O60486 1568 aa23.82■■□□□ 1.4
CHD8-211ENST00000556833 A2MP01023 1474 aa23.82■■□□□ 1.4
CHD8-211ENST00000556833 PLEKHH2Q8IVE3 1493 aa23.82■■□□□ 1.4
CHD8-211ENST00000556833 DMRT2Q9Y5R5 561 aa23.82■■□□□ 1.4
CHD8-211ENST00000556833 EHBP1L1Q8N3D4 1523 aa23.82■■□□□ 1.4
CHD8-211ENST00000556833 KIAA1107Q9UPP5 1409 aa23.81■■□□□ 1.4
CHD8-211ENST00000556833 CEP162Q5TB80 1403 aa23.8■■□□□ 1.4
CHD8-211ENST00000556833 GGT6Q6P531 493 aa23.8■■□□□ 1.4
CHD8-211ENST00000556833 CAMSAP1Q5T5Y3 1602 aa23.8■■□□□ 1.4
CHD8-211ENST00000556833 ADGBQ8N7X0 1667 aa23.79■■□□□ 1.4
CHD8-211ENST00000556833 ZMYM3Q14202 1370 aa23.79■■□□□ 1.4
CHD8-211ENST00000556833 MYO3AQ8NEV4 1616 aa23.77■■□□□ 1.4
CHD8-211ENST00000556833 NCOA1Q15788 1441 aa23.77■■□□□ 1.4
CHD8-211ENST00000556833 PTPRTO14522 1441 aa23.76■■□□□ 1.39
CHD8-211ENST00000556833 NPATQ14207 1427 aa23.74■■□□□ 1.39
CHD8-211ENST00000556833 NCKAP5LQ9HCH0 1330 aa23.72■■□□□ 1.39
CHD8-211ENST00000556833 MBD5Q9P267 1494 aa23.72■■□□□ 1.39
CHD8-211ENST00000556833 ZNF142P52746 1687 aaPredicted RBP23.71■■□□□ 1.39
CHD8-211ENST00000556833 LTBP4Q8N2S1 1624 aa23.7■■□□□ 1.39
CHD8-211ENST00000556833 CEP170BQ9Y4F5 1589 aaPredicted RBP23.69■■□□□ 1.38
CHD8-211ENST00000556833 CAMSAP2Q08AD1 1489 aa23.68■■□□□ 1.38
CHD8-211ENST00000556833 NCOA2Q15596 1464 aa23.68■■□□□ 1.38
CHD8-211ENST00000556833 PTPRKQ15262 1439 aa23.68■■□□□ 1.38
CHD8-211ENST00000556833 CCDC141Q6ZP82 1450 aa23.63■■□□□ 1.37
CHD8-211ENST00000556833 ZNF335Q9H4Z2 1342 aaPredicted RBP23.62■■□□□ 1.37
CHD8-211ENST00000556833 KIF3BO15066 747 aa23.61■■□□□ 1.37
CHD8-211ENST00000556833 RTEL1-TNFRSF6BF6WH68 1400 aa23.6■■□□□ 1.37
CHD8-211ENST00000556833 LOC105371045A0A1W2PR82 267 aa23.6■■□□□ 1.37
CHD8-211ENST00000556833 DHX29Q7Z478 1369 aaKnown RBP23.6■■□□□ 1.37
CHD8-211ENST00000556833 DISP3Q9P2K9 1392 aa23.6■■□□□ 1.37
CHD8-211ENST00000556833 FBXO31Q5XUX0 539 aaPredicted RBP23.57■■□□□ 1.36
CHD8-211ENST00000556833 DNMT1P26358 1616 aaKnown RBP23.57■■□□□ 1.36
CHD8-211ENST00000556833 PLA2R1Q13018 1463 aa23.56■■□□□ 1.36
CHD8-211ENST00000556833 KDM5DQ9BY66 1539 aa23.55■■□□□ 1.36
CHD8-211ENST00000556833 A2ML1A8K2U0 1454 aa23.55■■□□□ 1.36
CHD8-211ENST00000556833 TCOF1Q13428 1488 aaKnown RBP23.55■■□□□ 1.36
CHD8-211ENST00000556833 POLR1AO95602 1720 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms