RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 SPOCK2Q92563 424 aa10.62□□□□□ -0.71
RDH11-208ENST00000556692 KHSRPQ92945 711 aaKnown RBP eCLIP10.62□□□□□ -0.71
RDH11-208ENST00000556692 HCSTQ9UBK5 93 aa10.6□□□□□ -0.71
RDH11-208ENST00000556692 SOX12O15370 315 aa10.55□□□□□ -0.72
RDH11-208ENST00000556692 PBX2P40425 430 aa10.55□□□□□ -0.72
RDH11-208ENST00000556692 AXIN2Q9Y2T1 843 aa10.53□□□□□ -0.72
RDH11-208ENST00000556692 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
RDH11-208ENST00000556692 PHF8Q9UPP1 1060 aa10.5□□□□□ -0.73
RDH11-208ENST00000556692 NUDT7P0C024 238 aa10.49□□□□□ -0.73
RDH11-208ENST00000556692 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
RDH11-208ENST00000556692 TRIM41Q8WV44 630 aa10.47□□□□□ -0.73
RDH11-208ENST00000556692 POTEEQ6S8J3 1075 aa10.46□□□□□ -0.73
RDH11-208ENST00000556692 LHX6Q9UPM6 363 aa10.46□□□□□ -0.73
RDH11-208ENST00000556692 ADGRD1Q6QNK2 874 aa10.44□□□□□ -0.74
RDH11-208ENST00000556692 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
RDH11-208ENST00000556692 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
RDH11-208ENST00000556692 ARHGAP33O14559 1287 aa10.39□□□□□ -0.75
RDH11-208ENST00000556692 RIOK3O14730 519 aaKnown RBP10.38□□□□□ -0.75
RDH11-208ENST00000556692 NLRP6P59044 892 aa10.38□□□□□ -0.75
RDH11-208ENST00000556692 PCDHGA4Q9Y5G9 962 aa10.38□□□□□ -0.75
RDH11-208ENST00000556692 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
RDH11-208ENST00000556692 KCTD12Q96CX2 325 aaKnown RBP10.36□□□□□ -0.75
RDH11-208ENST00000556692 STAC3Q96MF2 364 aa10.36□□□□□ -0.75
RDH11-208ENST00000556692 VGFO15240 615 aaPredicted RBP10.35□□□□□ -0.75
RDH11-208ENST00000556692 IRX2Q9BZI1 471 aaPredicted RBP10.33□□□□□ -0.76
RDH11-208ENST00000556692 TK2O00142 265 aa10.32□□□□□ -0.76
RDH11-208ENST00000556692 KIF3CO14782 793 aa10.32□□□□□ -0.76
RDH11-208ENST00000556692 PSDA5PKW4 1024 aaPredicted RBP10.31□□□□□ -0.76
RDH11-208ENST00000556692 SLC34A2O95436 690 aa10.31□□□□□ -0.76
RDH11-208ENST00000556692 HRO43593 1189 aa10.3□□□□□ -0.76
RDH11-208ENST00000556692 RGS20O76081 388 aa10.29□□□□□ -0.76
RDH11-208ENST00000556692 PSEN2P49810 448 aa10.29□□□□□ -0.76
RDH11-208ENST00000556692 DMRTA1Q5VZB9 504 aa10.29□□□□□ -0.76
RDH11-208ENST00000556692 FBXO22Q8NEZ5 403 aa10.29□□□□□ -0.76
RDH11-208ENST00000556692 RNF25Q96BH1 459 aaPredicted RBP10.29□□□□□ -0.76
RDH11-208ENST00000556692 PTPN5P54829 565 aa10.27□□□□□ -0.77
RDH11-208ENST00000556692 TMC2Q8TDI7 906 aa10.26□□□□□ -0.77
RDH11-208ENST00000556692 BCL11BQ9C0K0 894 aaPredicted RBP10.23□□□□□ -0.77
RDH11-208ENST00000556692 STK24Q9Y6E0 443 aa10.21□□□□□ -0.77
RDH11-208ENST00000556692 MFRPQ9BY79 579 aa10.2□□□□□ -0.78
RDH11-208ENST00000556692 PPP4R3BQ5MIZ7 849 aa10.19□□□□□ -0.78
RDH11-208ENST00000556692 KCNH8Q96L42 1107 aa10.19□□□□□ -0.78
RDH11-208ENST00000556692 TAOK2Q9UL54 1235 aa10.18□□□□□ -0.78
RDH11-208ENST00000556692 IFFO2Q5TF58 517 aa10.17□□□□□ -0.78
RDH11-208ENST00000556692 A0A0G2JS52 829 aa10.16□□□□□ -0.78
RDH11-208ENST00000556692 KCNK17Q96T54 332 aa10.15□□□□□ -0.78
RDH11-208ENST00000556692 KDM4FA0A1W2PPD8 638 aa10.13□□□□□ -0.79
RDH11-208ENST00000556692 Q6ZNB5 142 aa10.11□□□□□ -0.79
RDH11-208ENST00000556692 PTCD2Q8WV60 388 aaKnown RBP10.11□□□□□ -0.79
RDH11-208ENST00000556692 GOLGA8CPA6NN73 597 aa10.1□□□□□ -0.79
RDH11-208ENST00000556692 STK25O00506 426 aa10.1□□□□□ -0.79
RDH11-208ENST00000556692 VPS9D1Q9Y2B5 631 aa10.1□□□□□ -0.79
RDH11-208ENST00000556692 TBC1D12O60347 775 aa10.08□□□□□ -0.8
RDH11-208ENST00000556692 THSD4Q6ZMP0 1018 aa10.08□□□□□ -0.8
RDH11-208ENST00000556692 PLPP6Q8IY26 295 aa10.04□□□□□ -0.8
RDH11-208ENST00000556692 WNT2BQ93097 391 aa10.04□□□□□ -0.8
RDH11-208ENST00000556692 MRPL50Q8N5N7 158 aaKnown RBP10.01□□□□□ -0.81
RDH11-208ENST00000556692 SLC4A5Q9BY07 1137 aa10□□□□□ -0.81
RDH11-208ENST00000556692 PPP1R37O75864 691 aa9.99□□□□□ -0.81
RDH11-208ENST00000556692 FOXK1P85037 733 aa9.99□□□□□ -0.81
RDH11-208ENST00000556692 BHMG1C9JSJ3 638 aaPredicted RBP9.98□□□□□ -0.81
RDH11-208ENST00000556692 ZNF454Q8N9F8 522 aa9.98□□□□□ -0.81
RDH11-208ENST00000556692 BCL2L12Q9HB09 334 aa9.96□□□□□ -0.82
RDH11-208ENST00000556692 PTPREP23469 700 aa9.94□□□□□ -0.82
RDH11-208ENST00000556692 DSG2Q14126 1118 aa9.93□□□□□ -0.82
RDH11-208ENST00000556692 GPHNQ9NQX3 736 aaPredicted RBP9.93□□□□□ -0.82
RDH11-208ENST00000556692 ZBED2Q9BTP6 218 aa9.92□□□□□ -0.82
RDH11-208ENST00000556692 NBPF3Q9H094 633 aa9.92□□□□□ -0.82
RDH11-208ENST00000556692 UPF1Q92900 1129 aaKnown RBP eCLIP9.9□□□□□ -0.82
RDH11-208ENST00000556692 ITGBL1O95965 494 aaPredicted RBP9.89□□□□□ -0.83
RDH11-208ENST00000556692 LAPTM4AQ15012 233 aa9.88□□□□□ -0.83
RDH11-208ENST00000556692 ECM2O94769 699 aaPredicted RBP9.87□□□□□ -0.83
RDH11-208ENST00000556692 FOSBP53539 338 aa9.86□□□□□ -0.83
RDH11-208ENST00000556692 TRAF7Q6Q0C0 670 aa9.86□□□□□ -0.83
RDH11-208ENST00000556692 ANKK1Q8NFD2 765 aa9.86□□□□□ -0.83
RDH11-208ENST00000556692 OXER1Q8TDS5 423 aa9.85□□□□□ -0.83
RDH11-208ENST00000556692 GFRA3O60609 400 aa9.83□□□□□ -0.84
RDH11-208ENST00000556692 KCNC4Q03721 635 aa9.82□□□□□ -0.84
RDH11-208ENST00000556692 BCAMP50895 628 aa9.8□□□□□ -0.84
RDH11-208ENST00000556692 ZDHHC16Q969W1 377 aa9.8□□□□□ -0.84
RDH11-208ENST00000556692 LCE2BO14633 110 aa9.79□□□□□ -0.84
RDH11-208ENST00000556692 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
RDH11-208ENST00000556692 JPH4Q96JJ6 628 aa9.78□□□□□ -0.84
RDH11-208ENST00000556692 RGL2O15211 777 aa9.77□□□□□ -0.85
RDH11-208ENST00000556692 NYAP1Q6ZVC0 841 aa9.77□□□□□ -0.85
RDH11-208ENST00000556692 RABGEF1Q9UJ41 708 aa9.76□□□□□ -0.85
RDH11-208ENST00000556692 SOWAHBA6NEL2 793 aa9.75□□□□□ -0.85
RDH11-208ENST00000556692 PROX2Q3B8N5 592 aa9.73□□□□□ -0.85
RDH11-208ENST00000556692 ANO8Q9HCE9 1232 aaPredicted RBP9.73□□□□□ -0.85
RDH11-208ENST00000556692 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
RDH11-208ENST00000556692 EVI5O60447 810 aa9.72□□□□□ -0.85
RDH11-208ENST00000556692 PPP1R3GB7ZBB8 358 aa9.71□□□□□ -0.86
RDH11-208ENST00000556692 ZNF787Q6DD87 383 aa9.71□□□□□ -0.86
RDH11-208ENST00000556692 PPP1R15BQ5SWA1 713 aa9.7□□□□□ -0.86
RDH11-208ENST00000556692 LAPTM4BQ86VI4 370 aa9.7□□□□□ -0.86
RDH11-208ENST00000556692 ZFRQ96KR1 1074 aaKnown RBP9.7□□□□□ -0.86
RDH11-208ENST00000556692 NRG2O14511 850 aaPredicted RBP9.68□□□□□ -0.86
RDH11-208ENST00000556692 PRKD2Q9BZL6 878 aa9.66□□□□□ -0.86
RDH11-208ENST00000556692 KIAA1468Q9P260 1216 aa9.66□□□□□ -0.86
RDH11-208ENST00000556692 COL9A1P20849 921 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms