RNA–Protein interactions for RNA: ENST00000556591.1

CFAP54-208, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 5

Gene CFAP54, Length 802 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-208ENST00000556591 C3orf67Q6ZVT6 689 aa11.68□□□□□ -0.54
CFAP54-208ENST00000556591 CRISPLD2Q9H0B8 497 aa11.67□□□□□ -0.54
CFAP54-208ENST00000556591 PDE4AP27815 886 aa11.66□□□□□ -0.54
CFAP54-208ENST00000556591 LARP6Q9BRS8 491 aaKnown RBP11.66□□□□□ -0.54
CFAP54-208ENST00000556591 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
CFAP54-208ENST00000556591 C2orf72A6NCS6 295 aa11.64□□□□□ -0.55
CFAP54-208ENST00000556591 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
CFAP54-208ENST00000556591 LHX8Q68G74 356 aa11.63□□□□□ -0.55
CFAP54-208ENST00000556591 TMC2Q8TDI7 906 aa11.63□□□□□ -0.55
CFAP54-208ENST00000556591 KIF3CO14782 793 aa11.62□□□□□ -0.55
CFAP54-208ENST00000556591 WDR70Q9NW82 654 aa11.61□□□□□ -0.55
CFAP54-208ENST00000556591 MAMSTRQ6ZN01 415 aa11.6□□□□□ -0.55
CFAP54-208ENST00000556591 DDX27Q96GQ7 796 aaKnown RBP11.6□□□□□ -0.55
CFAP54-208ENST00000556591 SCUBE2Q9NQ36 999 aa11.6□□□□□ -0.55
CFAP54-208ENST00000556591 DSG2Q14126 1118 aa11.59□□□□□ -0.55
CFAP54-208ENST00000556591 MFSD10Q14728 455 aa11.59□□□□□ -0.55
CFAP54-208ENST00000556591 OTUD5Q96G74 571 aa11.57□□□□□ -0.56
CFAP54-208ENST00000556591 FOXK1P85037 733 aa11.56□□□□□ -0.56
CFAP54-208ENST00000556591 PPP1R15BQ5SWA1 713 aa11.56□□□□□ -0.56
CFAP54-208ENST00000556591 SLAIN1Q8ND83 568 aa11.56□□□□□ -0.56
CFAP54-208ENST00000556591 PLPP6Q8IY26 295 aa11.54□□□□□ -0.56
CFAP54-208ENST00000556591 E2F4Q16254 413 aa11.5□□□□□ -0.57
CFAP54-208ENST00000556591 KCNV2Q8TDN2 545 aa11.47□□□□□ -0.57
CFAP54-208ENST00000556591 CAMK2BQ13554 666 aa11.46□□□□□ -0.57
CFAP54-208ENST00000556591 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
CFAP54-208ENST00000556591 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
CFAP54-208ENST00000556591 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.58
CFAP54-208ENST00000556591 HOXB3P14651 431 aaPredicted RBP11.39□□□□□ -0.59
CFAP54-208ENST00000556591 DPYSL4O14531 572 aa11.37□□□□□ -0.59
CFAP54-208ENST00000556591 SLC34A2O95436 690 aa11.37□□□□□ -0.59
CFAP54-208ENST00000556591 OXER1Q8TDS5 423 aa11.37□□□□□ -0.59
CFAP54-208ENST00000556591 ARHGEF1Q92888 912 aaKnown RBP11.37□□□□□ -0.59
CFAP54-208ENST00000556591 MAP3K9P80192 1104 aa11.35□□□□□ -0.59
CFAP54-208ENST00000556591 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
CFAP54-208ENST00000556591 PTCD2Q8WV60 388 aaKnown RBP11.35□□□□□ -0.59
CFAP54-208ENST00000556591 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
CFAP54-208ENST00000556591 SNPHO15079 494 aa11.33□□□□□ -0.6
CFAP54-208ENST00000556591 PCDHGA4Q9Y5G9 962 aa11.33□□□□□ -0.6
CFAP54-208ENST00000556591 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
CFAP54-208ENST00000556591 TBC1D12O60347 775 aa11.3□□□□□ -0.6
CFAP54-208ENST00000556591 ARSIQ5FYB1 569 aa11.3□□□□□ -0.6
CFAP54-208ENST00000556591 KHSRPQ92945 711 aaKnown RBP eCLIP11.3□□□□□ -0.6
CFAP54-208ENST00000556591 RIMBP2O15034 1052 aa11.29□□□□□ -0.6
CFAP54-208ENST00000556591 GPR153Q6NV75 609 aa11.28□□□□□ -0.6
CFAP54-208ENST00000556591 EVI5O60447 810 aa11.27□□□□□ -0.61
CFAP54-208ENST00000556591 NBR1Q14596 966 aa11.27□□□□□ -0.61
CFAP54-208ENST00000556591 SEMA3EO15041 775 aa11.26□□□□□ -0.61
CFAP54-208ENST00000556591 BCANQ96GW7 911 aa11.26□□□□□ -0.61
CFAP54-208ENST00000556591 ZSWIM6Q9HCJ5 1215 aa11.26□□□□□ -0.61
CFAP54-208ENST00000556591 NUDT7P0C024 238 aa11.25□□□□□ -0.61
CFAP54-208ENST00000556591 PDIA6Q15084 440 aa11.25□□□□□ -0.61
CFAP54-208ENST00000556591 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
CFAP54-208ENST00000556591 FAM163AQ96GL9 167 aaPredicted RBP11.24□□□□□ -0.61
CFAP54-208ENST00000556591 KDM4FA0A1W2PPD8 638 aa11.22□□□□□ -0.61
CFAP54-208ENST00000556591 ST18O60284 1047 aa11.22□□□□□ -0.61
CFAP54-208ENST00000556591 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
CFAP54-208ENST00000556591 ANO8Q9HCE9 1232 aaPredicted RBP11.21□□□□□ -0.61
CFAP54-208ENST00000556591 MLLT3P42568 568 aaPredicted RBP11.19□□□□□ -0.62
CFAP54-208ENST00000556591 TESPA1A2RU30 521 aaPredicted RBP11.18□□□□□ -0.62
CFAP54-208ENST00000556591 DDX12PQ92771 950 aa11.18□□□□□ -0.62
CFAP54-208ENST00000556591 ZNF316A6NFI3 1004 aaPredicted RBP11.16□□□□□ -0.62
CFAP54-208ENST00000556591 GRXCR2A6NFK2 248 aa11.16□□□□□ -0.62
CFAP54-208ENST00000556591 LCE2DQ5TA82 110 aaPredicted RBP11.16□□□□□ -0.62
CFAP54-208ENST00000556591 PTGER2P43116 358 aa11.15□□□□□ -0.62
CFAP54-208ENST00000556591 MARVELD3Q96A59 401 aa11.15□□□□□ -0.62
CFAP54-208ENST00000556591 LHX6Q9UPM6 363 aa11.15□□□□□ -0.62
CFAP54-208ENST00000556591 PCDHGA10Q9Y5H3 936 aa11.1□□□□□ -0.63
CFAP54-208ENST00000556591 EMP3P54852 163 aa11.09□□□□□ -0.63
CFAP54-208ENST00000556591 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
CFAP54-208ENST00000556591 ZNF454Q8N9F8 522 aa11.09□□□□□ -0.63
CFAP54-208ENST00000556591 PHF14O94880 888 aa11.08□□□□□ -0.64
CFAP54-208ENST00000556591 OSBPP22059 807 aa11.08□□□□□ -0.64
CFAP54-208ENST00000556591 FOSBP53539 338 aa11.08□□□□□ -0.64
CFAP54-208ENST00000556591 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
CFAP54-208ENST00000556591 ERBB3P21860 1342 aa11.08□□□□□ -0.64
CFAP54-208ENST00000556591 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
CFAP54-208ENST00000556591 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
CFAP54-208ENST00000556591 FAM205CA6NFA0 338 aa11.06□□□□□ -0.64
CFAP54-208ENST00000556591 RBM26Q5T8P6 1007 aaKnown RBP11.06□□□□□ -0.64
CFAP54-208ENST00000556591 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
CFAP54-208ENST00000556591 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
CFAP54-208ENST00000556591 TYW1BQ6NUM6 668 aa11.04□□□□□ -0.64
CFAP54-208ENST00000556591 RBM33Q96EV2 1170 aaKnown RBP11.04□□□□□ -0.64
CFAP54-208ENST00000556591 EPAS1Q99814 870 aa11.04□□□□□ -0.64
CFAP54-208ENST00000556591 POTEB3A0JP26 581 aa11.03□□□□□ -0.64
CFAP54-208ENST00000556591 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
CFAP54-208ENST00000556591 POTEBQ6S5H4 581 aa11.03□□□□□ -0.64
CFAP54-208ENST00000556591 ZDHHC16Q969W1 377 aa11.03□□□□□ -0.64
CFAP54-208ENST00000556591 PSDA5PKW4 1024 aaPredicted RBP11.02□□□□□ -0.65
CFAP54-208ENST00000556591 PPP4R3BQ5MIZ7 849 aa11.02□□□□□ -0.65
CFAP54-208ENST00000556591 ADAM33Q9BZ11 813 aa11.01□□□□□ -0.65
CFAP54-208ENST00000556591 EN1Q05925 392 aaPredicted RBP11□□□□□ -0.65
CFAP54-208ENST00000556591 FBXW7Q969H0 707 aa11□□□□□ -0.65
CFAP54-208ENST00000556591 HS3ST6Q96QI5 342 aa11□□□□□ -0.65
CFAP54-208ENST00000556591 MAP3K7O43318 606 aa10.99□□□□□ -0.65
CFAP54-208ENST00000556591 TSR1Q2NL82 804 aaKnown RBP10.98□□□□□ -0.65
CFAP54-208ENST00000556591 NUTM2FA1L443 756 aa10.97□□□□□ -0.65
CFAP54-208ENST00000556591 C6orf132Q5T0Z8 1188 aa10.96□□□□□ -0.65
CFAP54-208ENST00000556591 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
CFAP54-208ENST00000556591 BCL2L12Q9HB09 334 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms