RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 NBR1Q14596 966 aa10.88□□□□□ -0.67
PCNX1-212ENST00000556516 G3V3G9 751 aa10.87□□□□□ -0.67
PCNX1-212ENST00000556516 DDX27Q96GQ7 796 aaKnown RBP10.86□□□□□ -0.67
PCNX1-212ENST00000556516 TMEM121BQ9BXQ6 578 aaPredicted RBP10.85□□□□□ -0.67
PCNX1-212ENST00000556516 MFSD10Q14728 455 aa10.84□□□□□ -0.67
PCNX1-212ENST00000556516 E2F4Q16254 413 aa10.83□□□□□ -0.68
PCNX1-212ENST00000556516 TMEM92Q6UXU6 159 aa10.83□□□□□ -0.68
PCNX1-212ENST00000556516 DSG2Q14126 1118 aa10.82□□□□□ -0.68
PCNX1-212ENST00000556516 PPP1R15BQ5SWA1 713 aa10.82□□□□□ -0.68
PCNX1-212ENST00000556516 P3H3Q8IVL6 736 aa10.82□□□□□ -0.68
PCNX1-212ENST00000556516 L3MBTL3Q96JM7 780 aaPredicted RBP10.82□□□□□ -0.68
PCNX1-212ENST00000556516 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
PCNX1-212ENST00000556516 C2orf72A6NCS6 295 aa10.81□□□□□ -0.68
PCNX1-212ENST00000556516 TMC2Q8TDI7 906 aa10.81□□□□□ -0.68
PCNX1-212ENST00000556516 PRKCSHP14314 528 aaPredicted RBP10.78□□□□□ -0.68
PCNX1-212ENST00000556516 KIF3CO14782 793 aa10.76□□□□□ -0.69
PCNX1-212ENST00000556516 C3orf67Q6ZVT6 689 aa10.75□□□□□ -0.69
PCNX1-212ENST00000556516 PLPP6Q8IY26 295 aa10.75□□□□□ -0.69
PCNX1-212ENST00000556516 POTEB2H3BUK9 544 aa10.74□□□□□ -0.69
PCNX1-212ENST00000556516 EMILIN3Q9NT22 766 aa10.74□□□□□ -0.69
PCNX1-212ENST00000556516 POTEJP0CG39 1038 aa10.73□□□□□ -0.69
PCNX1-212ENST00000556516 FOXK1P85037 733 aa10.73□□□□□ -0.69
PCNX1-212ENST00000556516 CAMK2BQ13554 666 aa10.72□□□□□ -0.69
PCNX1-212ENST00000556516 ARHGEF1Q92888 912 aaKnown RBP10.72□□□□□ -0.69
PCNX1-212ENST00000556516 TPRNQ4KMQ1 711 aa10.71□□□□□ -0.69
PCNX1-212ENST00000556516 SEMA3EO15041 775 aa10.7□□□□□ -0.7
PCNX1-212ENST00000556516 DPYSL4O14531 572 aa10.69□□□□□ -0.7
PCNX1-212ENST00000556516 UPF1Q92900 1129 aaKnown RBP eCLIP10.68□□□□□ -0.7
PCNX1-212ENST00000556516 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.66□□□□□ -0.7
PCNX1-212ENST00000556516 MLLT3P42568 568 aaPredicted RBP10.61□□□□□ -0.71
PCNX1-212ENST00000556516 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
PCNX1-212ENST00000556516 ARIH1Q9Y4X5 557 aaPredicted RBP10.6□□□□□ -0.71
PCNX1-212ENST00000556516 LMOD2Q6P5Q4 547 aa10.58□□□□□ -0.72
PCNX1-212ENST00000556516 MAP3K9P80192 1104 aa10.57□□□□□ -0.72
PCNX1-212ENST00000556516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.57□□□□□ -0.72
PCNX1-212ENST00000556516 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
PCNX1-212ENST00000556516 PDIA6Q15084 440 aa10.56□□□□□ -0.72
PCNX1-212ENST00000556516 SLAIN1Q8ND83 568 aa10.56□□□□□ -0.72
PCNX1-212ENST00000556516 SCUBE2Q9NQ36 999 aa10.52□□□□□ -0.73
PCNX1-212ENST00000556516 RBM26Q5T8P6 1007 aaKnown RBP10.51□□□□□ -0.73
PCNX1-212ENST00000556516 GRXCR2A6NFK2 248 aa10.5□□□□□ -0.73
PCNX1-212ENST00000556516 SPDYE16A6NNV3 312 aaPredicted RBP10.5□□□□□ -0.73
PCNX1-212ENST00000556516 EVI5O60447 810 aa10.5□□□□□ -0.73
PCNX1-212ENST00000556516 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
PCNX1-212ENST00000556516 PTCD2Q8WV60 388 aaKnown RBP10.49□□□□□ -0.73
PCNX1-212ENST00000556516 DDX12PQ92771 950 aa10.49□□□□□ -0.73
PCNX1-212ENST00000556516 KHSRPQ92945 711 aaKnown RBP eCLIP10.48□□□□□ -0.73
PCNX1-212ENST00000556516 HOXB3P14651 431 aaPredicted RBP10.47□□□□□ -0.73
PCNX1-212ENST00000556516 PCDHGA4Q9Y5G9 962 aa10.47□□□□□ -0.73
PCNX1-212ENST00000556516 MAMSTRQ6ZN01 415 aa10.46□□□□□ -0.73
PCNX1-212ENST00000556516 OTUD5Q96G74 571 aa10.46□□□□□ -0.73
PCNX1-212ENST00000556516 TBC1D12O60347 775 aa10.45□□□□□ -0.74
PCNX1-212ENST00000556516 SLC34A2O95436 690 aa10.45□□□□□ -0.74
PCNX1-212ENST00000556516 SMYD5Q6GMV2 418 aa10.44□□□□□ -0.74
PCNX1-212ENST00000556516 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
PCNX1-212ENST00000556516 ARSIQ5FYB1 569 aa10.43□□□□□ -0.74
PCNX1-212ENST00000556516 ZC3H15Q8WU90 426 aaKnown RBP10.43□□□□□ -0.74
PCNX1-212ENST00000556516 LHX8Q68G74 356 aa10.42□□□□□ -0.74
PCNX1-212ENST00000556516 NUDT7P0C024 238 aa10.41□□□□□ -0.74
PCNX1-212ENST00000556516 DOK7Q18PE1 504 aa10.4□□□□□ -0.74
PCNX1-212ENST00000556516 OSBPP22059 807 aa10.39□□□□□ -0.75
PCNX1-212ENST00000556516 GPIHBP1Q8IV16 184 aa10.39□□□□□ -0.75
PCNX1-212ENST00000556516 ZNF316A6NFI3 1004 aaPredicted RBP10.38□□□□□ -0.75
PCNX1-212ENST00000556516 PTGER2P43116 358 aa10.37□□□□□ -0.75
PCNX1-212ENST00000556516 ZNF710Q8N1W2 664 aa10.37□□□□□ -0.75
PCNX1-212ENST00000556516 KDM4FA0A1W2PPD8 638 aa10.36□□□□□ -0.75
PCNX1-212ENST00000556516 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
PCNX1-212ENST00000556516 GPR153Q6NV75 609 aa10.36□□□□□ -0.75
PCNX1-212ENST00000556516 RBM33Q96EV2 1170 aaKnown RBP10.36□□□□□ -0.75
PCNX1-212ENST00000556516 ANO8Q9HCE9 1232 aaPredicted RBP10.36□□□□□ -0.75
PCNX1-212ENST00000556516 RIMBP2O15034 1052 aa10.34□□□□□ -0.75
PCNX1-212ENST00000556516 PCDHGA10Q9Y5H3 936 aa10.34□□□□□ -0.75
PCNX1-212ENST00000556516 CDHR5Q9HBB8 845 aa10.33□□□□□ -0.76
PCNX1-212ENST00000556516 GPR37O15354 613 aa10.32□□□□□ -0.76
PCNX1-212ENST00000556516 SLC24A3Q9HC58 644 aa10.32□□□□□ -0.76
PCNX1-212ENST00000556516 ZMYND10O75800 440 aa10.31□□□□□ -0.76
PCNX1-212ENST00000556516 TSR1Q2NL82 804 aaKnown RBP10.3□□□□□ -0.76
PCNX1-212ENST00000556516 ZNF454Q8N9F8 522 aa10.3□□□□□ -0.76
PCNX1-212ENST00000556516 LHX6Q9UPM6 363 aa10.3□□□□□ -0.76
PCNX1-212ENST00000556516 MAP3K7O43318 606 aa10.29□□□□□ -0.76
PCNX1-212ENST00000556516 PHF14O94880 888 aa10.29□□□□□ -0.76
PCNX1-212ENST00000556516 FOSBP53539 338 aa10.28□□□□□ -0.76
PCNX1-212ENST00000556516 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
PCNX1-212ENST00000556516 JPH4Q96JJ6 628 aa10.28□□□□□ -0.76
PCNX1-212ENST00000556516 ZSWIM6Q9HCJ5 1215 aa10.28□□□□□ -0.76
PCNX1-212ENST00000556516 SNPHO15079 494 aa10.26□□□□□ -0.77
PCNX1-212ENST00000556516 FECHP22830 423 aa10.26□□□□□ -0.77
PCNX1-212ENST00000556516 TYW1BQ6NUM6 668 aa10.26□□□□□ -0.77
PCNX1-212ENST00000556516 BARGINQ6ZT62 677 aa10.26□□□□□ -0.77
PCNX1-212ENST00000556516 EPAS1Q99814 870 aa10.25□□□□□ -0.77
PCNX1-212ENST00000556516 HOXB1P14653 301 aaPredicted RBP10.24□□□□□ -0.77
PCNX1-212ENST00000556516 KRI1Q8N9T8 703 aaKnown RBP10.24□□□□□ -0.77
PCNX1-212ENST00000556516 ADAM33Q9BZ11 813 aa10.24□□□□□ -0.77
PCNX1-212ENST00000556516 ZDHHC16Q969W1 377 aa10.23□□□□□ -0.77
PCNX1-212ENST00000556516 PTGDRQ13258 359 aa10.22□□□□□ -0.77
PCNX1-212ENST00000556516 ST18O60284 1047 aa10.21□□□□□ -0.77
PCNX1-212ENST00000556516 FCHSD2O94868 740 aa10.21□□□□□ -0.77
PCNX1-212ENST00000556516 MARVELD3Q96A59 401 aa10.21□□□□□ -0.77
PCNX1-212ENST00000556516 NPDC1Q9NQX5 325 aaPredicted RBP10.21□□□□□ -0.77
PCNX1-212ENST00000556516 FBXW7Q969H0 707 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms