RNA–Protein interactions for RNA: ENST00000556407.5

MEG3-226, Transcript of maternally expressed 3, humanhuman

TSL 4

Gene MEG3, Length 632 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-226ENST00000556407 SCAPERQ9BY12 1400 aa22.66■■□□□ 1.22
MEG3-226ENST00000556407 ARID4BQ4LE39 1312 aaPredicted RBP22.66■■□□□ 1.22
MEG3-226ENST00000556407 RIMS1Q86UR5 1692 aaKnown RBP22.66■■□□□ 1.22
MEG3-226ENST00000556407 TROQ12816 1431 aaPredicted RBP22.65■■□□□ 1.22
MEG3-226ENST00000556407 PCF11O94913 1555 aaKnown RBP22.64■■□□□ 1.22
MEG3-226ENST00000556407 MAGI2Q86UL8 1455 aa22.64■■□□□ 1.21
MEG3-226ENST00000556407 CDC42BPBQ9Y5S2 1711 aa22.59■■□□□ 1.21
MEG3-226ENST00000556407 CASKIN1Q8WXD9 1431 aa22.58■■□□□ 1.21
MEG3-226ENST00000556407 CDK11AQ9UQ88 783 aaPredicted RBP22.58■■□□□ 1.21
MEG3-226ENST00000556407 LMTK3Q96Q04 1460 aa22.58■■□□□ 1.2
MEG3-226ENST00000556407 EFCAB2Q5VUJ9 269 aa22.57■■□□□ 1.2
MEG3-226ENST00000556407 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
MEG3-226ENST00000556407 KDM5CP41229 1560 aa22.55■■□□□ 1.2
MEG3-226ENST00000556407 CLIP1P30622 1438 aa22.55■■□□□ 1.2
MEG3-226ENST00000556407 FER1L4A9Z1Z3 1794 aa22.54■■□□□ 1.2
MEG3-226ENST00000556407 ATP10AO60312 1499 aa22.54■■□□□ 1.2
MEG3-226ENST00000556407 PREX2Q70Z35 1606 aa22.53■■□□□ 1.2
MEG3-226ENST00000556407 CCDC18Q5T9S5 1454 aa22.53■■□□□ 1.2
MEG3-226ENST00000556407 ZNF518AQ6AHZ1 1483 aa22.52■■□□□ 1.2
MEG3-226ENST00000556407 C9orf84Q5VXU9 1444 aa22.51■■□□□ 1.19
MEG3-226ENST00000556407 ARHGEF12Q9NZN5 1544 aa22.51■■□□□ 1.19
MEG3-226ENST00000556407 FYCO1Q9BQS8 1478 aa22.49■■□□□ 1.19
MEG3-226ENST00000556407 CDC42BPAQ5VT25 1732 aa22.49■■□□□ 1.19
MEG3-226ENST00000556407 MLECQ14165 292 aa22.49■■□□□ 1.19
MEG3-226ENST00000556407 AFAP1Q8N556 730 aa22.49■■□□□ 1.19
MEG3-226ENST00000556407 DIP2CQ9Y2E4 1556 aa22.48■■□□□ 1.19
MEG3-226ENST00000556407 ABCC1P33527 1531 aa22.47■■□□□ 1.19
MEG3-226ENST00000556407 ITSN2Q9NZM3 1697 aa22.46■■□□□ 1.19
MEG3-226ENST00000556407 ABCA6Q8N139 1617 aa22.46■■□□□ 1.19
MEG3-226ENST00000556407 PLPPR3Q6T4P5 718 aa22.44■■□□□ 1.18
MEG3-226ENST00000556407 TRAPPC8Q9Y2L5 1435 aa22.44■■□□□ 1.18
MEG3-226ENST00000556407 REREQ9P2R6 1566 aa22.42■■□□□ 1.18
MEG3-226ENST00000556407 MLH3Q9UHC1 1453 aa22.41■■□□□ 1.18
MEG3-226ENST00000556407 HSPA2P54652 639 aa22.41■■□□□ 1.18
MEG3-226ENST00000556407 KIDINS220Q9ULH0 1771 aa22.39■■□□□ 1.17
MEG3-226ENST00000556407 SAMD9LQ8IVG5 1584 aa22.38■■□□□ 1.17
MEG3-226ENST00000556407 GPATCH8Q9UKJ3 1502 aaKnown RBP22.36■■□□□ 1.17
MEG3-226ENST00000556407 PREX1Q8TCU6 1659 aa22.35■■□□□ 1.17
MEG3-226ENST00000556407 CEBPAP49715 358 aaPredicted RBP22.34■■□□□ 1.17
MEG3-226ENST00000556407 AGLP35573 1532 aa22.33■■□□□ 1.17
MEG3-226ENST00000556407 SYCP2Q9BX26 1530 aa22.32■■□□□ 1.16
MEG3-226ENST00000556407 MYT1LQ9UL68 1186 aa22.3■■□□□ 1.16
MEG3-226ENST00000556407 C3P01024 1663 aa22.3■■□□□ 1.16
MEG3-226ENST00000556407 FBXO41Q8TF61 875 aa22.29■■□□□ 1.16
MEG3-226ENST00000556407 ZNF777Q9ULD5 760 aaPredicted RBP22.26■■□□□ 1.15
MEG3-226ENST00000556407 STRCQ7RTU9 1775 aa22.24■■□□□ 1.15
MEG3-226ENST00000556407 TIAM1Q13009 1591 aa22.24■■□□□ 1.15
MEG3-226ENST00000556407 INO80Q9ULG1 1556 aaPredicted RBP22.24■■□□□ 1.15
MEG3-226ENST00000556407 HNRNPMP52272 730 aaKnown RBP eCLIP22.23■■□□□ 1.15
MEG3-226ENST00000556407 KIAA1107Q9UPP5 1409 aa22.23■■□□□ 1.15
MEG3-226ENST00000556407 MTUS2Q5JR59 1369 aa22.22■■□□□ 1.15
MEG3-226ENST00000556407 CEP162Q5TB80 1403 aa22.22■■□□□ 1.15
MEG3-226ENST00000556407 ATP7AQ04656 1500 aa22.21■■□□□ 1.15
MEG3-226ENST00000556407 CCNB3Q8WWL7 1395 aa22.21■■□□□ 1.15
MEG3-226ENST00000556407 PLXNC1O60486 1568 aa22.21■■□□□ 1.15
MEG3-226ENST00000556407 SUPT6HQ7KZ85 1726 aaKnown RBP22.2■■□□□ 1.14
MEG3-226ENST00000556407 EHBP1L1Q8N3D4 1523 aa22.2■■□□□ 1.14
MEG3-226ENST00000556407 CFDP1Q9UEE9 299 aaPredicted RBP22.19■■□□□ 1.14
MEG3-226ENST00000556407 UHRF1BP1Q6BDS2 1440 aa22.19■■□□□ 1.14
MEG3-226ENST00000556407 SETD1BQ9UPS6 1966 aaKnown RBP22.19■■□□□ 1.14
MEG3-226ENST00000556407 PLEKHH2Q8IVE3 1493 aa22.18■■□□□ 1.14
MEG3-226ENST00000556407 SPAG9O60271 1321 aaKnown RBP22.18■■□□□ 1.14
MEG3-226ENST00000556407 MROH2AA6NES4 1674 aa22.16■■□□□ 1.14
MEG3-226ENST00000556407 ZNF644Q9H582 1327 aaPredicted RBP22.15■■□□□ 1.14
MEG3-226ENST00000556407 MBD5Q9P267 1494 aa22.15■■□□□ 1.14
MEG3-226ENST00000556407 CNTLNQ9NXG0 1405 aa22.14■■□□□ 1.13
MEG3-226ENST00000556407 A2MP01023 1474 aa22.13■■□□□ 1.13
MEG3-226ENST00000556407 CLTCQ00610 1675 aaKnown RBP22.11■■□□□ 1.13
MEG3-226ENST00000556407 ADGBQ8N7X0 1667 aa22.11■■□□□ 1.13
MEG3-226ENST00000556407 CERKQ8TCT0 537 aa22.09■■□□□ 1.13
MEG3-226ENST00000556407 ESF1Q9H501 851 aaKnown RBP22.09■■□□□ 1.13
MEG3-226ENST00000556407 ZMYM3Q14202 1370 aa22.07■■□□□ 1.12
MEG3-226ENST00000556407 NCOA2Q15596 1464 aa22.07■■□□□ 1.12
MEG3-226ENST00000556407 NPATQ14207 1427 aa22.06■■□□□ 1.12
MEG3-226ENST00000556407 RTEL1-TNFRSF6BF6WH68 1400 aa22.03■■□□□ 1.12
MEG3-226ENST00000556407 CAMSAP2Q08AD1 1489 aa22.03■■□□□ 1.12
MEG3-226ENST00000556407 PTPRTO14522 1441 aa22.02■■□□□ 1.12
MEG3-226ENST00000556407 NCOA1Q15788 1441 aa22.02■■□□□ 1.12
MEG3-226ENST00000556407 MYO3AQ8NEV4 1616 aa22.02■■□□□ 1.11
MEG3-226ENST00000556407 LOC105371045A0A1W2PR82 267 aa22.01■■□□□ 1.11
MEG3-226ENST00000556407 ZNF142P52746 1687 aaPredicted RBP22.01■■□□□ 1.11
MEG3-226ENST00000556407 PTPRKQ15262 1439 aa22■■□□□ 1.11
MEG3-226ENST00000556407 CAMSAP1Q5T5Y3 1602 aa22■■□□□ 1.11
MEG3-226ENST00000556407 DMRT2Q9Y5R5 561 aa22■■□□□ 1.11
MEG3-226ENST00000556407 VPS8Q8N3P4 1428 aa21.99■■□□□ 1.11
MEG3-226ENST00000556407 CCDC141Q6ZP82 1450 aa21.99■■□□□ 1.11
MEG3-226ENST00000556407 GGT6Q6P531 493 aa21.99■■□□□ 1.11
MEG3-226ENST00000556407 DHX29Q7Z478 1369 aaKnown RBP21.97■■□□□ 1.11
MEG3-226ENST00000556407 LRRC9Q6ZRR7 1453 aa21.96■■□□□ 1.11
MEG3-226ENST00000556407 LTBP4Q8N2S1 1624 aa21.96■■□□□ 1.11
MEG3-226ENST00000556407 ARHGEF5Q12774 1597 aa21.95■■□□□ 1.1
MEG3-226ENST00000556407 CEP170BQ9Y4F5 1589 aaPredicted RBP21.95■■□□□ 1.1
MEG3-226ENST00000556407 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
MEG3-226ENST00000556407 KANK4Q5T7N3 995 aaPredicted RBP21.89■■□□□ 1.09
MEG3-226ENST00000556407 PLA2R1Q13018 1463 aa21.89■■□□□ 1.09
MEG3-226ENST00000556407 NCKAP5LQ9HCH0 1330 aa21.88■■□□□ 1.09
MEG3-226ENST00000556407 MAP3K1Q13233 1512 aa21.88■■□□□ 1.09
MEG3-226ENST00000556407 TCOF1Q13428 1488 aaKnown RBP21.88■■□□□ 1.09
MEG3-226ENST00000556407 KDM5DQ9BY66 1539 aa21.87■■□□□ 1.09
MEG3-226ENST00000556407 KIF3BO15066 747 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms