RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
SLIRP-206ENST00000556375 ARHGEF40Q8TER5 1519 aa18.41■□□□□ 0.54
SLIRP-206ENST00000556375 RAPGEF3O95398 923 aa18.41■□□□□ 0.54
SLIRP-206ENST00000556375 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
SLIRP-206ENST00000556375 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
SLIRP-206ENST00000556375 TIAM1Q13009 1591 aa18.39■□□□□ 0.53
SLIRP-206ENST00000556375 EFCAB2Q5VUJ9 269 aa18.39■□□□□ 0.53
SLIRP-206ENST00000556375 SCAPERQ9BY12 1400 aa18.38■□□□□ 0.53
SLIRP-206ENST00000556375 ABCC1P33527 1531 aa18.37■□□□□ 0.53
SLIRP-206ENST00000556375 ITSN2Q9NZM3 1697 aa18.35■□□□□ 0.53
SLIRP-206ENST00000556375 AEBP2Q6ZN18 517 aaPredicted RBP18.35■□□□□ 0.53
SLIRP-206ENST00000556375 ZFYVE16Q7Z3T8 1539 aa18.34■□□□□ 0.53
SLIRP-206ENST00000556375 GPATCH8Q9UKJ3 1502 aaKnown RBP18.34■□□□□ 0.53
SLIRP-206ENST00000556375 MAGI2Q86UL8 1455 aa18.34■□□□□ 0.53
SLIRP-206ENST00000556375 SUPT6HQ7KZ85 1726 aaKnown RBP18.34■□□□□ 0.53
SLIRP-206ENST00000556375 KDM5CP41229 1560 aa18.34■□□□□ 0.53
SLIRP-206ENST00000556375 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.53
SLIRP-206ENST00000556375 KDM4FA0A1W2PPD8 638 aa18.33■□□□□ 0.52
SLIRP-206ENST00000556375 MAP3K1Q13233 1512 aa18.33■□□□□ 0.52
SLIRP-206ENST00000556375 SAMD9LQ8IVG5 1584 aa18.32■□□□□ 0.52
SLIRP-206ENST00000556375 CCNB3Q8WWL7 1395 aa18.3■□□□□ 0.52
SLIRP-206ENST00000556375 HECW2Q9P2P5 1572 aa18.3■□□□□ 0.52
SLIRP-206ENST00000556375 LRRC9Q6ZRR7 1453 aa18.28■□□□□ 0.52
SLIRP-206ENST00000556375 YEATS2Q9ULM3 1422 aa18.28■□□□□ 0.52
SLIRP-206ENST00000556375 ARHGEF12Q9NZN5 1544 aa18.28■□□□□ 0.52
SLIRP-206ENST00000556375 NCOA2Q15596 1464 aa18.27■□□□□ 0.52
SLIRP-206ENST00000556375 SYCP2Q9BX26 1530 aa18.27■□□□□ 0.51
SLIRP-206ENST00000556375 BCORL1Q5H9F3 1711 aa18.26■□□□□ 0.51
SLIRP-206ENST00000556375 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
SLIRP-206ENST00000556375 SIGLEC1Q9BZZ2 1709 aa18.25■□□□□ 0.51
SLIRP-206ENST00000556375 ADAMTSL3P82987 1691 aa18.25■□□□□ 0.51
SLIRP-206ENST00000556375 TRAPPC8Q9Y2L5 1435 aa18.24■□□□□ 0.51
SLIRP-206ENST00000556375 DIP2CQ9Y2E4 1556 aa18.23■□□□□ 0.51
SLIRP-206ENST00000556375 MLH3Q9UHC1 1453 aa18.23■□□□□ 0.51
SLIRP-206ENST00000556375 CFDP1Q9UEE9 299 aaPredicted RBP18.23■□□□□ 0.51
SLIRP-206ENST00000556375 ABCA6Q8N139 1617 aa18.23■□□□□ 0.51
SLIRP-206ENST00000556375 KIAA1107Q9UPP5 1409 aa18.23■□□□□ 0.51
SLIRP-206ENST00000556375 C9orf84Q5VXU9 1444 aa18.22■□□□□ 0.51
SLIRP-206ENST00000556375 AFAP1Q8N556 730 aa18.21■□□□□ 0.51
SLIRP-206ENST00000556375 KIDINS220Q9ULH0 1771 aa18.21■□□□□ 0.51
SLIRP-206ENST00000556375 REREQ9P2R6 1566 aa18.21■□□□□ 0.51
SLIRP-206ENST00000556375 ATP10AO60312 1499 aa18.2■□□□□ 0.5
SLIRP-206ENST00000556375 ZNF777Q9ULD5 760 aaPredicted RBP18.2■□□□□ 0.5
SLIRP-206ENST00000556375 MADDQ8WXG6 1647 aa18.19■□□□□ 0.5
SLIRP-206ENST00000556375 INO80Q9ULG1 1556 aaPredicted RBP18.18■□□□□ 0.5
SLIRP-206ENST00000556375 ARID4BQ4LE39 1312 aaPredicted RBP18.17■□□□□ 0.5
SLIRP-206ENST00000556375 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
SLIRP-206ENST00000556375 ATP7AQ04656 1500 aa18.15■□□□□ 0.5
SLIRP-206ENST00000556375 KANK4Q5T7N3 995 aaPredicted RBP18.15■□□□□ 0.5
SLIRP-206ENST00000556375 MBD5Q9P267 1494 aa18.14■□□□□ 0.5
SLIRP-206ENST00000556375 APLP2Q06481 763 aa18.14■□□□□ 0.49
SLIRP-206ENST00000556375 RIMS1Q86UR5 1692 aaKnown RBP18.13■□□□□ 0.49
SLIRP-206ENST00000556375 FER1L4A9Z1Z3 1794 aa18.13■□□□□ 0.49
SLIRP-206ENST00000556375 HNRNPMP52272 730 aaKnown RBP eCLIP18.13■□□□□ 0.495e-9■■■■■ 34.7
SLIRP-206ENST00000556375 MYT1LQ9UL68 1186 aa18.12■□□□□ 0.49
SLIRP-206ENST00000556375 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
SLIRP-206ENST00000556375 MYOM3Q5VTT5 1437 aa18.12■□□□□ 0.49
SLIRP-206ENST00000556375 SPAG9O60271 1321 aaKnown RBP18.11■□□□□ 0.49
SLIRP-206ENST00000556375 PTPRMP28827 1452 aa18.11■□□□□ 0.49
SLIRP-206ENST00000556375 AGLP35573 1532 aa18.11■□□□□ 0.49
SLIRP-206ENST00000556375 ARHGEF5Q12774 1597 aa18.11■□□□□ 0.49
SLIRP-206ENST00000556375 CCDC141Q6ZP82 1450 aa18.1■□□□□ 0.49
SLIRP-206ENST00000556375 ADGBQ8N7X0 1667 aa18.09■□□□□ 0.49
SLIRP-206ENST00000556375 MIA2Q96PC5 1412 aa18.09■□□□□ 0.49
SLIRP-206ENST00000556375 PLXNC1O60486 1568 aa18.08■□□□□ 0.49
SLIRP-206ENST00000556375 RTEL1-TNFRSF6BF6WH68 1400 aa18.06■□□□□ 0.48
SLIRP-206ENST00000556375 A2MP01023 1474 aa18.03■□□□□ 0.48
SLIRP-206ENST00000556375 PTPN23Q9H3S7 1636 aa18.03■□□□□ 0.48
SLIRP-206ENST00000556375 MLECQ14165 292 aa18.03■□□□□ 0.48
SLIRP-206ENST00000556375 RSPH4AQ5TD94 716 aa18.02■□□□□ 0.48
SLIRP-206ENST00000556375 MAST1Q9Y2H9 1570 aa18.02■□□□□ 0.48
SLIRP-206ENST00000556375 CROCC2H7BZ55 1655 aa18■□□□□ 0.47
SLIRP-206ENST00000556375 FGD6Q6ZV73 1430 aa18■□□□□ 0.47
SLIRP-206ENST00000556375 TCOF1Q13428 1488 aaKnown RBP17.98■□□□□ 0.47
SLIRP-206ENST00000556375 DNMT1P26358 1616 aaKnown RBP17.96■□□□□ 0.47
SLIRP-206ENST00000556375 MROH2AA6NES4 1674 aa17.96■□□□□ 0.47
SLIRP-206ENST00000556375 SHANK2Q9UPX8 1470 aa17.95■□□□□ 0.46
SLIRP-206ENST00000556375 C3P01024 1663 aa17.95■□□□□ 0.46
SLIRP-206ENST00000556375 CNTLNQ9NXG0 1405 aa17.94■□□□□ 0.46
SLIRP-206ENST00000556375 DHX29Q7Z478 1369 aaKnown RBP17.93■□□□□ 0.46
SLIRP-206ENST00000556375 TSPY4P0CV99 314 aa17.93■□□□□ 0.46
SLIRP-206ENST00000556375 TSPY10P0CW01 314 aa17.93■□□□□ 0.46
SLIRP-206ENST00000556375 CLTCQ00610 1675 aaKnown RBP17.91■□□□□ 0.46
SLIRP-206ENST00000556375 PREX1Q8TCU6 1659 aa17.91■□□□□ 0.46
SLIRP-206ENST00000556375 EIF2AK4Q9P2K8 1649 aaKnown RBP17.9■□□□□ 0.46
SLIRP-206ENST00000556375 ABCC5O15440 1437 aa17.9■□□□□ 0.46
SLIRP-206ENST00000556375 DAPK1P53355 1430 aa17.9■□□□□ 0.46
SLIRP-206ENST00000556375 LMTK3Q96Q04 1460 aa17.9■□□□□ 0.46
SLIRP-206ENST00000556375 FAM135AQ9P2D6 1515 aa17.89■□□□□ 0.45
SLIRP-206ENST00000556375 RNF17Q9BXT8 1623 aaKnown RBP17.88■□□□□ 0.45
SLIRP-206ENST00000556375 ESF1Q9H501 851 aaKnown RBP17.88■□□□□ 0.45
SLIRP-206ENST00000556375 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
SLIRP-206ENST00000556375 DUOX2Q9NRD8 1548 aa17.87■□□□□ 0.45
SLIRP-206ENST00000556375 SETD1BQ9UPS6 1966 aaKnown RBP17.86■□□□□ 0.45
SLIRP-206ENST00000556375 KDM5DQ9BY66 1539 aa17.84■□□□□ 0.45
SLIRP-206ENST00000556375 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
SLIRP-206ENST00000556375 PPP6R1Q9UPN7 881 aa17.84■□□□□ 0.45
SLIRP-206ENST00000556375 GGT6Q6P531 493 aa17.83■□□□□ 0.44
SLIRP-206ENST00000556375 ZC3H13Q5T200 1668 aaKnown RBP17.83■□□□□ 0.44
SLIRP-206ENST00000556375 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms