RNA–Protein interactions for RNA: ENST00000556355.5

SRP54-AS1-203, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 5 BASIC

Gene SRP54-AS1, Length 603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-203ENST00000556355 AMER1Q5JTC6 1135 aaPredicted RBP11.06□□□□□ -0.64
SRP54-AS1-203ENST00000556355 EMP3P54852 163 aa11.04□□□□□ -0.64
SRP54-AS1-203ENST00000556355 PCDH10Q9P2E7 1040 aa11.04□□□□□ -0.64
SRP54-AS1-203ENST00000556355 C2orf72A6NCS6 295 aa11.03□□□□□ -0.64
SRP54-AS1-203ENST00000556355 RTN4Q9NQC3 1192 aaKnown RBP11.03□□□□□ -0.64
SRP54-AS1-203ENST00000556355 RYDENQ9NUL5 291 aaKnown RBP11.03□□□□□ -0.64
SRP54-AS1-203ENST00000556355 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
SRP54-AS1-203ENST00000556355 CDAN1Q8IWY9 1227 aa11.02□□□□□ -0.65
SRP54-AS1-203ENST00000556355 TMC2Q8TDI7 906 aa11.02□□□□□ -0.65
SRP54-AS1-203ENST00000556355 KIF3CO14782 793 aa11.01□□□□□ -0.65
SRP54-AS1-203ENST00000556355 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
SRP54-AS1-203ENST00000556355 HOXB1P14653 301 aaPredicted RBP10.98□□□□□ -0.65
SRP54-AS1-203ENST00000556355 FAM205CA6NFA0 338 aa10.97□□□□□ -0.65
SRP54-AS1-203ENST00000556355 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.65
SRP54-AS1-203ENST00000556355 ZSWIM6Q9HCJ5 1215 aa10.95□□□□□ -0.66
SRP54-AS1-203ENST00000556355 GPR153Q6NV75 609 aa10.93□□□□□ -0.66
SRP54-AS1-203ENST00000556355 HS3ST6Q96QI5 342 aa10.93□□□□□ -0.66
SRP54-AS1-203ENST00000556355 ARSIQ5FYB1 569 aa10.92□□□□□ -0.66
SRP54-AS1-203ENST00000556355 POTEB3A0JP26 581 aa10.91□□□□□ -0.66
SRP54-AS1-203ENST00000556355 POTEBQ6S5H4 581 aa10.91□□□□□ -0.66
SRP54-AS1-203ENST00000556355 GPHNQ9NQX3 736 aaPredicted RBP10.91□□□□□ -0.66
SRP54-AS1-203ENST00000556355 ERBB3P21860 1342 aa10.9□□□□□ -0.66
SRP54-AS1-203ENST00000556355 KHSRPQ92945 711 aaKnown RBP eCLIP10.89□□□□□ -0.671e-9■■□□□ 14.1
SRP54-AS1-203ENST00000556355 FOXK1P85037 733 aa10.87□□□□□ -0.67
SRP54-AS1-203ENST00000556355 PLPP6Q8IY26 295 aa10.87□□□□□ -0.67
SRP54-AS1-203ENST00000556355 DSG2Q14126 1118 aa10.86□□□□□ -0.67
SRP54-AS1-203ENST00000556355 VARS2Q5ST30 1063 aaKnown RBP10.86□□□□□ -0.67
SRP54-AS1-203ENST00000556355 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
SRP54-AS1-203ENST00000556355 SLC34A2O95436 690 aa10.85□□□□□ -0.67
SRP54-AS1-203ENST00000556355 PCDHGA4Q9Y5G9 962 aa10.84□□□□□ -0.67
SRP54-AS1-203ENST00000556355 NUDT7P0C024 238 aa10.82□□□□□ -0.68
SRP54-AS1-203ENST00000556355 CRISPLD2Q9H0B8 497 aa10.82□□□□□ -0.68
SRP54-AS1-203ENST00000556355 PDE4AP27815 886 aa10.81□□□□□ -0.68
SRP54-AS1-203ENST00000556355 NCKAP5LQ9HCH0 1330 aa10.81□□□□□ -0.68
SRP54-AS1-203ENST00000556355 ZNF316A6NFI3 1004 aaPredicted RBP10.79□□□□□ -0.68
SRP54-AS1-203ENST00000556355 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.79□□□□□ -0.68
SRP54-AS1-203ENST00000556355 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
SRP54-AS1-203ENST00000556355 LARP6Q9BRS8 491 aaKnown RBP10.78□□□□□ -0.68
SRP54-AS1-203ENST00000556355 KRTAP3-3Q9BYR6 98 aa10.78□□□□□ -0.68
SRP54-AS1-203ENST00000556355 KRTAP3-2Q9BYR7 98 aa10.78□□□□□ -0.68
SRP54-AS1-203ENST00000556355 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
SRP54-AS1-203ENST00000556355 PTCD2Q8WV60 388 aaKnown RBP10.77□□□□□ -0.69
SRP54-AS1-203ENST00000556355 CADPS2Q86UW7 1296 aa10.75□□□□□ -0.69
SRP54-AS1-203ENST00000556355 SPRYD3Q8NCJ5 442 aa10.75□□□□□ -0.69
SRP54-AS1-203ENST00000556355 LHX6Q9UPM6 363 aa10.75□□□□□ -0.69
SRP54-AS1-203ENST00000556355 TBC1D12O60347 775 aa10.74□□□□□ -0.69
SRP54-AS1-203ENST00000556355 ZNF687Q8N1G0 1237 aa10.74□□□□□ -0.69
SRP54-AS1-203ENST00000556355 SPNS2Q8IVW8 549 aa10.73□□□□□ -0.69
SRP54-AS1-203ENST00000556355 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
SRP54-AS1-203ENST00000556355 DDX27Q96GQ7 796 aaKnown RBP10.73□□□□□ -0.69
SRP54-AS1-203ENST00000556355 CFAP44Q96MT7 982 aa10.71□□□□□ -0.69
SRP54-AS1-203ENST00000556355 PAXIP1Q6ZW49 1069 aaPredicted RBP10.7□□□□□ -0.7
SRP54-AS1-203ENST00000556355 KDM4FA0A1W2PPD8 638 aa10.69□□□□□ -0.7
SRP54-AS1-203ENST00000556355 OXER1Q8TDS5 423 aa10.69□□□□□ -0.7
SRP54-AS1-203ENST00000556355 MFSD10Q14728 455 aa10.68□□□□□ -0.7
SRP54-AS1-203ENST00000556355 MMRN1Q13201 1228 aa10.65□□□□□ -0.7
SRP54-AS1-203ENST00000556355 PSDA5PKW4 1024 aaPredicted RBP10.64□□□□□ -0.71
SRP54-AS1-203ENST00000556355 AXIN2Q9Y2T1 843 aa10.62□□□□□ -0.71
SRP54-AS1-203ENST00000556355 MAP3K9P80192 1104 aa10.61□□□□□ -0.71
SRP54-AS1-203ENST00000556355 ANKRD13DQ6ZTN6 518 aa10.61□□□□□ -0.71
SRP54-AS1-203ENST00000556355 EMILIN3Q9NT22 766 aa10.61□□□□□ -0.71
SRP54-AS1-203ENST00000556355 PPP4R3BQ5MIZ7 849 aa10.6□□□□□ -0.71
SRP54-AS1-203ENST00000556355 PBX2P40425 430 aa10.59□□□□□ -0.71
SRP54-AS1-203ENST00000556355 POTEEQ6S8J3 1075 aa10.59□□□□□ -0.71
SRP54-AS1-203ENST00000556355 EVI5O60447 810 aa10.58□□□□□ -0.72
SRP54-AS1-203ENST00000556355 LSM11P83369 360 aaKnown RBP eCLIP10.58□□□□□ -0.72
SRP54-AS1-203ENST00000556355 ARHGAP33O14559 1287 aa10.56□□□□□ -0.72
SRP54-AS1-203ENST00000556355 ZNF454Q8N9F8 522 aa10.56□□□□□ -0.72
SRP54-AS1-203ENST00000556355 ANO8Q9HCE9 1232 aaPredicted RBP10.55□□□□□ -0.72
SRP54-AS1-203ENST00000556355 CAMK2BQ13554 666 aa10.54□□□□□ -0.72
SRP54-AS1-203ENST00000556355 PSEN2P49810 448 aa10.52□□□□□ -0.73
SRP54-AS1-203ENST00000556355 FOSBP53539 338 aa10.51□□□□□ -0.73
SRP54-AS1-203ENST00000556355 MYT1LQ9UL68 1186 aa10.51□□□□□ -0.73
SRP54-AS1-203ENST00000556355 DPYSL4O14531 572 aa10.5□□□□□ -0.73
SRP54-AS1-203ENST00000556355 WDR70Q9NW82 654 aa10.5□□□□□ -0.73
SRP54-AS1-203ENST00000556355 DMRTA1Q5VZB9 504 aa10.49□□□□□ -0.73
SRP54-AS1-203ENST00000556355 JPH4Q96JJ6 628 aa10.49□□□□□ -0.73
SRP54-AS1-203ENST00000556355 KCNH8Q96L42 1107 aa10.49□□□□□ -0.73
SRP54-AS1-203ENST00000556355 KCNK17Q96T54 332 aa10.49□□□□□ -0.73
SRP54-AS1-203ENST00000556355 RNF166Q96A37 237 aaPredicted RBP10.48□□□□□ -0.73
SRP54-AS1-203ENST00000556355 PTGER2P43116 358 aa10.47□□□□□ -0.73
SRP54-AS1-203ENST00000556355 ADGRD1Q6QNK2 874 aa10.47□□□□□ -0.73
SRP54-AS1-203ENST00000556355 ZDHHC16Q969W1 377 aa10.46□□□□□ -0.73
SRP54-AS1-203ENST00000556355 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.73
SRP54-AS1-203ENST00000556355 TSHZ2Q9NRE2 1034 aa10.46□□□□□ -0.73
SRP54-AS1-203ENST00000556355 E2F4Q16254 413 aa10.45□□□□□ -0.74
SRP54-AS1-203ENST00000556355 PCDHGA10Q9Y5H3 936 aa10.44□□□□□ -0.74
SRP54-AS1-203ENST00000556355 PTPREP23469 700 aa10.43□□□□□ -0.74
SRP54-AS1-203ENST00000556355 ADAM33Q9BZ11 813 aa10.43□□□□□ -0.74
SRP54-AS1-203ENST00000556355 TK2O00142 265 aa10.42□□□□□ -0.74
SRP54-AS1-203ENST00000556355 PHF14O94880 888 aa10.4□□□□□ -0.74
SRP54-AS1-203ENST00000556355 DDX12PQ92771 950 aa10.39□□□□□ -0.75
SRP54-AS1-203ENST00000556355 HRO43593 1189 aa10.38□□□□□ -0.75
SRP54-AS1-203ENST00000556355 TYW1BQ6NUM6 668 aa10.38□□□□□ -0.75
SRP54-AS1-203ENST00000556355 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
SRP54-AS1-203ENST00000556355 PDIA6Q15084 440 aa10.37□□□□□ -0.75
SRP54-AS1-203ENST00000556355 FBXW7Q969H0 707 aa10.37□□□□□ -0.75
SRP54-AS1-203ENST00000556355 VPS9D1Q9Y2B5 631 aa10.37□□□□□ -0.75
SRP54-AS1-203ENST00000556355 SPDYE16A6NNV3 312 aaPredicted RBP10.35□□□□□ -0.75
SRP54-AS1-203ENST00000556355 EPAS1Q99814 870 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms