RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 GPIHBP1Q8IV16 184 aa8.05□□□□□ -1.12
SPTLC2-204ENST00000556264 KRI1Q8N9T8 703 aaKnown RBP8.05□□□□□ -1.12
SPTLC2-204ENST00000556264 ILDR1Q86SU0 546 aaPredicted RBP8.04□□□□□ -1.12
SPTLC2-204ENST00000556264 AK7Q96M32 723 aa8.04□□□□□ -1.12
SPTLC2-204ENST00000556264 ARXQ96QS3 562 aa8.04□□□□□ -1.12
SPTLC2-204ENST00000556264 DPYSL4O14531 572 aa8.03□□□□□ -1.12
SPTLC2-204ENST00000556264 C19orf67A6NJJ6 358 aa8.02□□□□□ -1.13
SPTLC2-204ENST00000556264 DPY19L2Q6NUT2 758 aa8.02□□□□□ -1.13
SPTLC2-204ENST00000556264 EMILIN3Q9NT22 766 aa8.02□□□□□ -1.13
SPTLC2-204ENST00000556264 SPDYE16A6NNV3 312 aaPredicted RBP8.01□□□□□ -1.13
SPTLC2-204ENST00000556264 DSG2Q14126 1118 aa8.01□□□□□ -1.13
SPTLC2-204ENST00000556264 GPBP1L1Q9HC44 474 aaPredicted RBP8.01□□□□□ -1.13
SPTLC2-204ENST00000556264 BMP2KQ9NSY1 1161 aaPredicted RBP8.01□□□□□ -1.13
SPTLC2-204ENST00000556264 TRIM35Q9UPQ4 493 aa8□□□□□ -1.13
SPTLC2-204ENST00000556264 TMC2Q8TDI7 906 aa7.99□□□□□ -1.13
SPTLC2-204ENST00000556264 MICALL2Q8IY33 904 aa7.98□□□□□ -1.13
SPTLC2-204ENST00000556264 PDIA6Q15084 440 aa7.97□□□□□ -1.13
SPTLC2-204ENST00000556264 IL27Q8NEV9 243 aa7.97□□□□□ -1.13
SPTLC2-204ENST00000556264 TRIM66O15016 1216 aa7.96□□□□□ -1.14
SPTLC2-204ENST00000556264 FOXK1P85037 733 aa7.96□□□□□ -1.14
SPTLC2-204ENST00000556264 GALR2O43603 387 aaPredicted RBP7.95□□□□□ -1.14
SPTLC2-204ENST00000556264 PLPP6Q8IY26 295 aa7.95□□□□□ -1.14
SPTLC2-204ENST00000556264 KDM4CQ9H3R0 1056 aa7.95□□□□□ -1.14
SPTLC2-204ENST00000556264 DAXXQ9UER7 740 aaPredicted RBP7.95□□□□□ -1.14
SPTLC2-204ENST00000556264 SUPT5HO00267 1087 aaKnown RBP7.94□□□□□ -1.14
SPTLC2-204ENST00000556264 PDE4DQ08499 809 aa7.94□□□□□ -1.14
SPTLC2-204ENST00000556264 PDCD7Q8N8D1 485 aaKnown RBP7.93□□□□□ -1.14
SPTLC2-204ENST00000556264 C2orf72A6NCS6 295 aa7.92□□□□□ -1.14
SPTLC2-204ENST00000556264 HOMEZQ8IX15 550 aa7.92□□□□□ -1.14
SPTLC2-204ENST00000556264 GRXCR2A6NFK2 248 aa7.91□□□□□ -1.14
SPTLC2-204ENST00000556264 GPR37O15354 613 aa7.91□□□□□ -1.14
SPTLC2-204ENST00000556264 MAP3K9P80192 1104 aa7.91□□□□□ -1.14
SPTLC2-204ENST00000556264 BOLA1Q9Y3E2 137 aa7.91□□□□□ -1.14
SPTLC2-204ENST00000556264 NUTM2FA1L443 756 aa7.9□□□□□ -1.14
SPTLC2-204ENST00000556264 ATN1P54259 1190 aaPredicted RBP7.9□□□□□ -1.14
SPTLC2-204ENST00000556264 TMEM121BQ9BXQ6 578 aaPredicted RBP7.9□□□□□ -1.14
SPTLC2-204ENST00000556264 G3V3G9 751 aa7.89□□□□□ -1.15
SPTLC2-204ENST00000556264 KIF3CO14782 793 aa7.89□□□□□ -1.15
SPTLC2-204ENST00000556264 IRX5P78411 483 aaPredicted RBP7.89□□□□□ -1.15
SPTLC2-204ENST00000556264 OCEL1Q9H607 264 aa7.89□□□□□ -1.15
SPTLC2-204ENST00000556264 MINK1Q8N4C8 1332 aaPredicted RBP7.88□□□□□ -1.15
SPTLC2-204ENST00000556264 UPF1Q92900 1129 aaKnown RBP eCLIP7.87□□□□□ -1.15
SPTLC2-204ENST00000556264 ATMINO43313 823 aaPredicted RBP7.86□□□□□ -1.15
SPTLC2-204ENST00000556264 IRF6O14896 467 aa7.85□□□□□ -1.15
SPTLC2-204ENST00000556264 OSBPP22059 807 aa7.85□□□□□ -1.15
SPTLC2-204ENST00000556264 IER5LQ5T953 404 aa7.85□□□□□ -1.15
SPTLC2-204ENST00000556264 FAM117AQ9C073 453 aa7.85□□□□□ -1.15
SPTLC2-204ENST00000556264 HAX1O00165 279 aa7.84□□□□□ -1.15
SPTLC2-204ENST00000556264 CLCN6P51797 869 aa7.84□□□□□ -1.15
SPTLC2-204ENST00000556264 MAP2K5Q13163 448 aa7.84□□□□□ -1.15
SPTLC2-204ENST00000556264 DDX12PQ92771 950 aa7.84□□□□□ -1.15
SPTLC2-204ENST00000556264 CCDC102AQ96A19 550 aa7.84□□□□□ -1.15
SPTLC2-204ENST00000556264 GNPATO15228 680 aa7.83□□□□□ -1.16
SPTLC2-204ENST00000556264 EVX2Q03828 476 aa7.83□□□□□ -1.16
SPTLC2-204ENST00000556264 ZNF316A6NFI3 1004 aaPredicted RBP7.82□□□□□ -1.16
SPTLC2-204ENST00000556264 PLCG2P16885 1265 aa7.82□□□□□ -1.16
SPTLC2-204ENST00000556264 PTGER2P43116 358 aa7.82□□□□□ -1.16
SPTLC2-204ENST00000556264 ASTLQ6HA08 431 aaPredicted RBP7.82□□□□□ -1.16
SPTLC2-204ENST00000556264 OXER1Q8TDS5 423 aa7.82□□□□□ -1.16
SPTLC2-204ENST00000556264 L3MBTL3Q96JM7 780 aaPredicted RBP7.82□□□□□ -1.16
SPTLC2-204ENST00000556264 ZMYND15Q9H091 742 aa7.82□□□□□ -1.16
SPTLC2-204ENST00000556264 TBC1D12O60347 775 aa7.81□□□□□ -1.16
SPTLC2-204ENST00000556264 FCHSD2O94868 740 aa7.81□□□□□ -1.16
SPTLC2-204ENST00000556264 FECHP22830 423 aa7.81□□□□□ -1.16
SPTLC2-204ENST00000556264 HIC1Q14526 733 aa7.81□□□□□ -1.16
SPTLC2-204ENST00000556264 AMHR2Q16671 573 aa7.81□□□□□ -1.16
SPTLC2-204ENST00000556264 TMEM92Q6UXU6 159 aa7.81□□□□□ -1.16
SPTLC2-204ENST00000556264 PLEKHG3A1L390 1219 aa7.8□□□□□ -1.16
SPTLC2-204ENST00000556264 PARP9Q8IXQ6 854 aa7.79□□□□□ -1.16
SPTLC2-204ENST00000556264 DDRGK1Q96HY6 314 aa7.79□□□□□ -1.16
SPTLC2-204ENST00000556264 EVI5O60447 810 aa7.78□□□□□ -1.16
SPTLC2-204ENST00000556264 PRIM1P49642 420 aaKnown RBP7.78□□□□□ -1.16
SPTLC2-204ENST00000556264 RSPH6AQ9H0K4 717 aa7.77□□□□□ -1.17
SPTLC2-204ENST00000556264 SEC24BO95487 1268 aa7.76□□□□□ -1.17
SPTLC2-204ENST00000556264 PTGDRQ13258 359 aa7.75□□□□□ -1.17
SPTLC2-204ENST00000556264 TTLL12Q14166 644 aaPredicted RBP7.75□□□□□ -1.17
SPTLC2-204ENST00000556264 COLQQ9Y215 455 aaPredicted RBP7.75□□□□□ -1.17
SPTLC2-204ENST00000556264 PELP1Q8IZL8 1130 aaKnown RBP7.72□□□□□ -1.17
SPTLC2-204ENST00000556264 PTCD2Q8WV60 388 aaKnown RBP7.72□□□□□ -1.17
SPTLC2-204ENST00000556264 GIGYF2Q6Y7W6 1299 aaKnown RBP7.71□□□□□ -1.18
SPTLC2-204ENST00000556264 ANO8Q9HCE9 1232 aaPredicted RBP7.71□□□□□ -1.18
SPTLC2-204ENST00000556264 MS4A1P11836 297 aa7.7□□□□□ -1.18
SPTLC2-204ENST00000556264 GOPCQ9HD26 462 aa7.7□□□□□ -1.18
SPTLC2-204ENST00000556264 REPIN1Q9BWE0 567 aaKnown RBP7.69□□□□□ -1.18
SPTLC2-204ENST00000556264 CDHR5Q9HBB8 845 aa7.69□□□□□ -1.18
SPTLC2-204ENST00000556264 GABBR2O75899 941 aa7.68□□□□□ -1.18
SPTLC2-204ENST00000556264 UBTFP17480 764 aaKnown RBP7.68□□□□□ -1.18
SPTLC2-204ENST00000556264 FLIIQ13045 1269 aa7.68□□□□□ -1.18
SPTLC2-204ENST00000556264 RBM33Q96EV2 1170 aaKnown RBP7.68□□□□□ -1.18
SPTLC2-204ENST00000556264 DCBLD2Q96PD2 775 aa7.68□□□□□ -1.18
SPTLC2-204ENST00000556264 NPDC1Q9NQX5 325 aaPredicted RBP7.68□□□□□ -1.18
SPTLC2-204ENST00000556264 MAP3K7O43318 606 aa7.67□□□□□ -1.18
SPTLC2-204ENST00000556264 PHF14O94880 888 aa7.67□□□□□ -1.18
SPTLC2-204ENST00000556264 EN1Q05925 392 aaPredicted RBP7.67□□□□□ -1.18
SPTLC2-204ENST00000556264 PCMTD1Q96MG8 357 aaPredicted RBP7.67□□□□□ -1.18
SPTLC2-204ENST00000556264 EPAS1Q99814 870 aa7.67□□□□□ -1.18
SPTLC2-204ENST00000556264 POTEFA5A3E0 1075 aa7.66□□□□□ -1.18
SPTLC2-204ENST00000556264 SLC34A2O95436 690 aa7.66□□□□□ -1.18
SPTLC2-204ENST00000556264 C3orf67Q6ZVT6 689 aa7.66□□□□□ -1.18
SPTLC2-204ENST00000556264 SLC39A7Q92504 469 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms