RNA–Protein interactions for RNA: ENST00000556112.5

NUMB-220, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-220ENST00000556112 MICALL2Q8IY33 904 aa8.4□□□□□ -1.06
NUMB-220ENST00000556112 TMEM121BQ9BXQ6 578 aaPredicted RBP8.4□□□□□ -1.06
NUMB-220ENST00000556112 SPRYD3Q8NCJ5 442 aa8.37□□□□□ -1.07
NUMB-220ENST00000556112 SLAIN1Q8ND83 568 aa8.37□□□□□ -1.07
NUMB-220ENST00000556112 PAXIP1Q6ZW49 1069 aaPredicted RBP8.36□□□□□ -1.07
NUMB-220ENST00000556112 CFAP44Q96MT7 982 aa8.36□□□□□ -1.07
NUMB-220ENST00000556112 SLC24A1O60721 1099 aa8.35□□□□□ -1.07
NUMB-220ENST00000556112 PLCB2Q00722 1185 aa8.32□□□□□ -1.08
NUMB-220ENST00000556112 TMEM92Q6UXU6 159 aa8.3□□□□□ -1.08
NUMB-220ENST00000556112 TMC2Q8TDI7 906 aa8.27□□□□□ -1.09
NUMB-220ENST00000556112 C2orf72A6NCS6 295 aa8.25□□□□□ -1.09
NUMB-220ENST00000556112 BICRAQ9NZM4 1560 aa8.24□□□□□ -1.09
NUMB-220ENST00000556112 UNC13AQ9UPW8 1703 aa8.23□□□□□ -1.09
NUMB-220ENST00000556112 KIF3CO14782 793 aa8.23□□□□□ -1.09
NUMB-220ENST00000556112 SCRIBQ14160 1630 aa8.22□□□□□ -1.09
NUMB-220ENST00000556112 SNPHO15079 494 aa8.22□□□□□ -1.09
NUMB-220ENST00000556112 CADPS2Q86UW7 1296 aa8.22□□□□□ -1.09
NUMB-220ENST00000556112 GPHNQ9NQX3 736 aaPredicted RBP8.22□□□□□ -1.09
NUMB-220ENST00000556112 PDE4AP27815 886 aa8.21□□□□□ -1.1
NUMB-220ENST00000556112 FAM163AQ96GL9 167 aaPredicted RBP8.21□□□□□ -1.1
NUMB-220ENST00000556112 NCKAP5LQ9HCH0 1330 aa8.21□□□□□ -1.1
NUMB-220ENST00000556112 CRISPLD2Q9H0B8 497 aa8.2□□□□□ -1.1
NUMB-220ENST00000556112 LARP6Q9BRS8 491 aaKnown RBP8.19□□□□□ -1.1
NUMB-220ENST00000556112 HAP1P54257 671 aaPredicted RBP8.18□□□□□ -1.1
NUMB-220ENST00000556112 FOXK1P85037 733 aa8.18□□□□□ -1.1
NUMB-220ENST00000556112 DSG2Q14126 1118 aa8.18□□□□□ -1.1
NUMB-220ENST00000556112 TSHZ2Q9NRE2 1034 aa8.18□□□□□ -1.1
NUMB-220ENST00000556112 DOK7Q18PE1 504 aa8.17□□□□□ -1.1
NUMB-220ENST00000556112 SHROOM4Q9ULL8 1493 aa8.17□□□□□ -1.1
NUMB-220ENST00000556112 HOXB3P14651 431 aaPredicted RBP8.16□□□□□ -1.1
NUMB-220ENST00000556112 PLPP6Q8IY26 295 aa8.16□□□□□ -1.1
NUMB-220ENST00000556112 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
NUMB-220ENST00000556112 DDX27Q96GQ7 796 aaKnown RBP8.16□□□□□ -1.1
NUMB-220ENST00000556112 PPP1R15BQ5SWA1 713 aa8.15□□□□□ -1.1
NUMB-220ENST00000556112 RIMBP2O15034 1052 aa8.14□□□□□ -1.11
NUMB-220ENST00000556112 ST18O60284 1047 aa8.14□□□□□ -1.11
NUMB-220ENST00000556112 MFSD10Q14728 455 aa8.12□□□□□ -1.11
NUMB-220ENST00000556112 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
NUMB-220ENST00000556112 WDR70Q9NW82 654 aa8.1□□□□□ -1.11
NUMB-220ENST00000556112 SLC34A2O95436 690 aa8.09□□□□□ -1.11
NUMB-220ENST00000556112 ZSWIM6Q9HCJ5 1215 aa8.09□□□□□ -1.11
NUMB-220ENST00000556112 ARSIQ5FYB1 569 aa8.08□□□□□ -1.12
NUMB-220ENST00000556112 VSIG10Q8N0Z9 540 aa8.08□□□□□ -1.12
NUMB-220ENST00000556112 HOXB1P14653 301 aaPredicted RBP8.07□□□□□ -1.12
NUMB-220ENST00000556112 GPR153Q6NV75 609 aa8.07□□□□□ -1.12
NUMB-220ENST00000556112 MARVELD3Q96A59 401 aa8.07□□□□□ -1.12
NUMB-220ENST00000556112 PCDHGA4Q9Y5G9 962 aa8.07□□□□□ -1.12
NUMB-220ENST00000556112 PTCD2Q8WV60 388 aaKnown RBP8.06□□□□□ -1.12
NUMB-220ENST00000556112 UPF1Q92900 1129 aaKnown RBP eCLIP8.06□□□□□ -1.12
NUMB-220ENST00000556112 TBC1D12O60347 775 aa8.05□□□□□ -1.12
NUMB-220ENST00000556112 KHSRPQ92945 711 aaKnown RBP eCLIP8.05□□□□□ -1.124e-6■■■■□ 20.7
NUMB-220ENST00000556112 EMP3P54852 163 aa8.04□□□□□ -1.12
NUMB-220ENST00000556112 EIF4G1Q04637 1599 aaKnown RBP8.04□□□□□ -1.12
NUMB-220ENST00000556112 POTEMA6NI47 508 aa8.03□□□□□ -1.12
NUMB-220ENST00000556112 NUDT7P0C024 238 aa8.03□□□□□ -1.12
NUMB-220ENST00000556112 POTEGQ6S5H5 508 aa8.03□□□□□ -1.12
NUMB-220ENST00000556112 OXER1Q8TDS5 423 aa8.03□□□□□ -1.12
NUMB-220ENST00000556112 EMILIN3Q9NT22 766 aa8.03□□□□□ -1.12
NUMB-220ENST00000556112 CAMK2BQ13554 666 aa8.02□□□□□ -1.13
NUMB-220ENST00000556112 E2F4Q16254 413 aa8.02□□□□□ -1.13
NUMB-220ENST00000556112 MAP3K9P80192 1104 aa8.01□□□□□ -1.13
NUMB-220ENST00000556112 CC2D2AQ9P2K1 1620 aa8□□□□□ -1.13
NUMB-220ENST00000556112 FAM205CA6NFA0 338 aa8□□□□□ -1.13
NUMB-220ENST00000556112 KDM2AQ9Y2K7 1162 aa8□□□□□ -1.13
NUMB-220ENST00000556112 ERBB3P21860 1342 aa8□□□□□ -1.13
NUMB-220ENST00000556112 CECR2Q9BXF3 1484 aa7.99□□□□□ -1.13
NUMB-220ENST00000556112 KDM4FA0A1W2PPD8 638 aa7.97□□□□□ -1.13
NUMB-220ENST00000556112 DPYSL4O14531 572 aa7.97□□□□□ -1.13
NUMB-220ENST00000556112 EVI5O60447 810 aa7.97□□□□□ -1.13
NUMB-220ENST00000556112 LHX6Q9UPM6 363 aa7.97□□□□□ -1.13
NUMB-220ENST00000556112 ZNF316A6NFI3 1004 aaPredicted RBP7.96□□□□□ -1.14
NUMB-220ENST00000556112 VARS2Q5ST30 1063 aaKnown RBP7.96□□□□□ -1.14
NUMB-220ENST00000556112 HS3ST6Q96QI5 342 aa7.96□□□□□ -1.14
NUMB-220ENST00000556112 POTEB3A0JP26 581 aa7.94□□□□□ -1.14
NUMB-220ENST00000556112 POTEBQ6S5H4 581 aa7.94□□□□□ -1.14
NUMB-220ENST00000556112 KCNV2Q8TDN2 545 aa7.93□□□□□ -1.14
NUMB-220ENST00000556112 ANO8Q9HCE9 1232 aaPredicted RBP7.93□□□□□ -1.14
NUMB-220ENST00000556112 P3H3Q8IVL6 736 aa7.92□□□□□ -1.14
NUMB-220ENST00000556112 CDAN1Q8IWY9 1227 aa7.91□□□□□ -1.14
NUMB-220ENST00000556112 ARHGEF1Q92888 912 aaKnown RBP7.91□□□□□ -1.14
NUMB-220ENST00000556112 ARIH1Q9Y4X5 557 aaPredicted RBP7.91□□□□□ -1.14
NUMB-220ENST00000556112 BAZ1AQ9NRL2 1556 aaPredicted RBP7.9□□□□□ -1.14
NUMB-220ENST00000556112 NCAPD3P42695 1498 aa7.9□□□□□ -1.14
NUMB-220ENST00000556112 PSDA5PKW4 1024 aaPredicted RBP7.9□□□□□ -1.14
NUMB-220ENST00000556112 ATAD2BQ9ULI0 1458 aa7.89□□□□□ -1.15
NUMB-220ENST00000556112 SPDYE16A6NNV3 312 aaPredicted RBP7.89□□□□□ -1.15
NUMB-220ENST00000556112 PDIA6Q15084 440 aa7.89□□□□□ -1.15
NUMB-220ENST00000556112 ZNF454Q8N9F8 522 aa7.89□□□□□ -1.15
NUMB-220ENST00000556112 PPP4R3BQ5MIZ7 849 aa7.88□□□□□ -1.15
NUMB-220ENST00000556112 ZNF687Q8N1G0 1237 aa7.88□□□□□ -1.15
NUMB-220ENST00000556112 PCDH10Q9P2E7 1040 aa7.88□□□□□ -1.15
NUMB-220ENST00000556112 SMARCA4P51532 1647 aa7.88□□□□□ -1.15
NUMB-220ENST00000556112 SMARCA2P51531 1590 aa7.86□□□□□ -1.15
NUMB-220ENST00000556112 MROH2BQ7Z745 1585 aa7.86□□□□□ -1.15
NUMB-220ENST00000556112 FOSBP53539 338 aa7.86□□□□□ -1.15
NUMB-220ENST00000556112 DDX12PQ92771 950 aa7.86□□□□□ -1.15
NUMB-220ENST00000556112 JPH4Q96JJ6 628 aa7.86□□□□□ -1.15
NUMB-220ENST00000556112 PTGER2P43116 358 aa7.85□□□□□ -1.15
NUMB-220ENST00000556112 PCDHGA10Q9Y5H3 936 aa7.85□□□□□ -1.15
NUMB-220ENST00000556112 PHF14O94880 888 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms