RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 ZMYM4Q5VZL5 1548 aa27.8■■■□□ 2.04
GPHN-211ENST00000556020 ADAMTSL3P82987 1691 aa27.78■■■□□ 2.04
GPHN-211ENST00000556020 ZFYVE16Q7Z3T8 1539 aa27.78■■■□□ 2.04
GPHN-211ENST00000556020 BCORL1Q5H9F3 1711 aa27.78■■■□□ 2.04
GPHN-211ENST00000556020 POGZQ7Z3K3 1410 aa27.77■■■□□ 2.04
GPHN-211ENST00000556020 YEATS2Q9ULM3 1422 aa27.76■■■□□ 2.04
GPHN-211ENST00000556020 CDC42BPBQ9Y5S2 1711 aa27.75■■■□□ 2.03
GPHN-211ENST00000556020 HECW2Q9P2P5 1572 aa27.74■■■□□ 2.03
GPHN-211ENST00000556020 MADDQ8WXG6 1647 aa27.73■■■□□ 2.03
GPHN-211ENST00000556020 PREX2Q70Z35 1606 aa27.7■■■□□ 2.03
GPHN-211ENST00000556020 MAGI2Q86UL8 1455 aa27.7■■■□□ 2.03
GPHN-211ENST00000556020 PTPRMP28827 1452 aa27.7■■■□□ 2.02
GPHN-211ENST00000556020 SIGLEC1Q9BZZ2 1709 aa27.7■■■□□ 2.02
GPHN-211ENST00000556020 CDC42BPAQ5VT25 1732 aa27.67■■■□□ 2.02
GPHN-211ENST00000556020 CEP162Q5TB80 1403 aa27.67■■■□□ 2.02
GPHN-211ENST00000556020 RIMS1Q86UR5 1692 aaKnown RBP27.65■■■□□ 2.02
GPHN-211ENST00000556020 ZNF518AQ6AHZ1 1483 aa27.64■■■□□ 2.02
GPHN-211ENST00000556020 AFAP1Q8N556 730 aa27.64■■■□□ 2.02
GPHN-211ENST00000556020 MYT1LQ9UL68 1186 aa27.64■■■□□ 2.02
GPHN-211ENST00000556020 MLECQ14165 292 aa27.62■■■□□ 2.01
GPHN-211ENST00000556020 KDM5CP41229 1560 aa27.6■■■□□ 2.01
GPHN-211ENST00000556020 ITSN2Q9NZM3 1697 aa27.59■■■□□ 2.01
GPHN-211ENST00000556020 ATP10AO60312 1499 aa27.59■■■□□ 2.01
GPHN-211ENST00000556020 ABCC1P33527 1531 aa27.59■■■□□ 2.01
GPHN-211ENST00000556020 PLPPR3Q6T4P5 718 aa27.59■■■□□ 2.01
GPHN-211ENST00000556020 ZNF777Q9ULD5 760 aaPredicted RBP27.58■■■□□ 2.01
GPHN-211ENST00000556020 C9orf84Q5VXU9 1444 aa27.58■■■□□ 2
GPHN-211ENST00000556020 ARHGEF12Q9NZN5 1544 aa27.57■■■□□ 2
GPHN-211ENST00000556020 MTUS2Q5JR59 1369 aa27.56■■■□□ 2
GPHN-211ENST00000556020 LOC105371045A0A1W2PR82 267 aa27.55■■■□□ 2
GPHN-211ENST00000556020 TRAPPC8Q9Y2L5 1435 aa27.55■■■□□ 2
GPHN-211ENST00000556020 FER1L4A9Z1Z3 1794 aa27.54■■■□□ 2
GPHN-211ENST00000556020 GPATCH8Q9UKJ3 1502 aaKnown RBP27.53■■■□□ 2
GPHN-211ENST00000556020 SAMD9LQ8IVG5 1584 aa27.52■■■□□ 2
GPHN-211ENST00000556020 DIP2CQ9Y2E4 1556 aa27.52■■■□□ 2
GPHN-211ENST00000556020 ABCA6Q8N139 1617 aa27.5■■□□□ 1.99
GPHN-211ENST00000556020 CCNB3Q8WWL7 1395 aa27.49■■□□□ 1.99
GPHN-211ENST00000556020 EHBP1L1Q8N3D4 1523 aa27.47■■□□□ 1.99
GPHN-211ENST00000556020 SYCP2Q9BX26 1530 aa27.47■■□□□ 1.99
GPHN-211ENST00000556020 MLH3Q9UHC1 1453 aa27.47■■□□□ 1.99
GPHN-211ENST00000556020 CFDP1Q9UEE9 299 aaPredicted RBP27.46■■□□□ 1.99
GPHN-211ENST00000556020 KIDINS220Q9ULH0 1771 aa27.43■■□□□ 1.98
GPHN-211ENST00000556020 HNRNPMP52272 730 aaKnown RBP eCLIP27.43■■□□□ 1.981e-6■■■■■ 30.7
GPHN-211ENST00000556020 TIAM1Q13009 1591 aa27.41■■□□□ 1.98
GPHN-211ENST00000556020 REREQ9P2R6 1566 aa27.39■■□□□ 1.98
GPHN-211ENST00000556020 LMTK3Q96Q04 1460 aa27.38■■□□□ 1.97
GPHN-211ENST00000556020 PLEKHH2Q8IVE3 1493 aa27.37■■□□□ 1.97
GPHN-211ENST00000556020 SPAG9O60271 1321 aaKnown RBP27.36■■□□□ 1.97
GPHN-211ENST00000556020 VPS8Q8N3P4 1428 aa27.34■■□□□ 1.97
GPHN-211ENST00000556020 KIAA1107Q9UPP5 1409 aa27.34■■□□□ 1.97
GPHN-211ENST00000556020 SUPT6HQ7KZ85 1726 aaKnown RBP27.34■■□□□ 1.97
GPHN-211ENST00000556020 CEBPAP49715 358 aaPredicted RBP27.33■■□□□ 1.97
GPHN-211ENST00000556020 ZNF644Q9H582 1327 aaPredicted RBP27.33■■□□□ 1.97
GPHN-211ENST00000556020 AGLP35573 1532 aa27.31■■□□□ 1.96
GPHN-211ENST00000556020 ATP7AQ04656 1500 aa27.31■■□□□ 1.96
GPHN-211ENST00000556020 HSPA2P54652 639 aa27.31■■□□□ 1.96
GPHN-211ENST00000556020 NCOA2Q15596 1464 aa27.31■■□□□ 1.96
GPHN-211ENST00000556020 INO80Q9ULG1 1556 aaPredicted RBP27.29■■□□□ 1.96
GPHN-211ENST00000556020 ESF1Q9H501 851 aaKnown RBP27.28■■□□□ 1.96
GPHN-211ENST00000556020 PREX1Q8TCU6 1659 aa27.24■■□□□ 1.95
GPHN-211ENST00000556020 C3P01024 1663 aa27.23■■□□□ 1.95
GPHN-211ENST00000556020 ILDR1Q86SU0 546 aaPredicted RBP27.22■■□□□ 1.95
GPHN-211ENST00000556020 LRRC9Q6ZRR7 1453 aa27.21■■□□□ 1.95
GPHN-211ENST00000556020 MBD5Q9P267 1494 aa27.21■■□□□ 1.95
GPHN-211ENST00000556020 A2MP01023 1474 aa27.19■■□□□ 1.94
GPHN-211ENST00000556020 CAMSAP2Q08AD1 1489 aa27.19■■□□□ 1.94
GPHN-211ENST00000556020 ADGBQ8N7X0 1667 aa27.18■■□□□ 1.94
GPHN-211ENST00000556020 PLXNC1O60486 1568 aa27.17■■□□□ 1.94
GPHN-211ENST00000556020 KANK4Q5T7N3 995 aaPredicted RBP27.15■■□□□ 1.94
GPHN-211ENST00000556020 CNTLNQ9NXG0 1405 aa27.14■■□□□ 1.93
GPHN-211ENST00000556020 CCDC141Q6ZP82 1450 aa27.13■■□□□ 1.93
GPHN-211ENST00000556020 UHRF1BP1Q6BDS2 1440 aa27.12■■□□□ 1.93
GPHN-211ENST00000556020 SETD1BQ9UPS6 1966 aaKnown RBP27.11■■□□□ 1.93
GPHN-211ENST00000556020 CLTCQ00610 1675 aaKnown RBP27.11■■□□□ 1.93
GPHN-211ENST00000556020 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
GPHN-211ENST00000556020 GGT6Q6P531 493 aa27.11■■□□□ 1.93
GPHN-211ENST00000556020 RTEL1-TNFRSF6BF6WH68 1400 aa27.09■■□□□ 1.93
GPHN-211ENST00000556020 MROH2AA6NES4 1674 aa27.09■■□□□ 1.93
GPHN-211ENST00000556020 APLP2Q06481 763 aa27.06■■□□□ 1.92
GPHN-211ENST00000556020 ARHGEF5Q12774 1597 aa27.05■■□□□ 1.92
GPHN-211ENST00000556020 RSPH4AQ5TD94 716 aa27.04■■□□□ 1.92
GPHN-211ENST00000556020 ZMYM3Q14202 1370 aa27.04■■□□□ 1.92
GPHN-211ENST00000556020 DHX29Q7Z478 1369 aaKnown RBP27.02■■□□□ 1.92
GPHN-211ENST00000556020 MYOM3Q5VTT5 1437 aa27.01■■□□□ 1.91
GPHN-211ENST00000556020 TSPY4P0CV99 314 aa27.01■■□□□ 1.91
GPHN-211ENST00000556020 TSPY10P0CW01 314 aa27.01■■□□□ 1.91
GPHN-211ENST00000556020 STRCQ7RTU9 1775 aa26.99■■□□□ 1.91
GPHN-211ENST00000556020 KIF3BO15066 747 aa26.98■■□□□ 1.91
GPHN-211ENST00000556020 NPATQ14207 1427 aa26.97■■□□□ 1.91
GPHN-211ENST00000556020 MIA2Q96PC5 1412 aa26.96■■□□□ 1.91
GPHN-211ENST00000556020 PPP6R1Q9UPN7 881 aa26.93■■□□□ 1.9
GPHN-211ENST00000556020 PTPRKQ15262 1439 aa26.91■■□□□ 1.9
GPHN-211ENST00000556020 MYO3AQ8NEV4 1616 aa26.91■■□□□ 1.9
GPHN-211ENST00000556020 FBXO41Q8TF61 875 aa26.91■■□□□ 1.9
GPHN-211ENST00000556020 MAST1Q9Y2H9 1570 aa26.91■■□□□ 1.9
GPHN-211ENST00000556020 DMRT2Q9Y5R5 561 aa26.89■■□□□ 1.9
GPHN-211ENST00000556020 PTPN23Q9H3S7 1636 aa26.88■■□□□ 1.89
GPHN-211ENST00000556020 KDM5DQ9BY66 1539 aa26.86■■□□□ 1.89
GPHN-211ENST00000556020 CAMSAP1Q5T5Y3 1602 aa26.86■■□□□ 1.89
GPHN-211ENST00000556020 WASHC2CQ9Y4E1 1318 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms