RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 BCL11BQ9C0K0 894 aaPredicted RBP5.13□□□□□ -1.59
NEK9-208ENST00000555961 ZNF710Q8N1W2 664 aa5.12□□□□□ -1.59
NEK9-208ENST00000555961 RIMBP2O15034 1052 aa5.11□□□□□ -1.59
NEK9-208ENST00000555961 DOK7Q18PE1 504 aa5.11□□□□□ -1.59
NEK9-208ENST00000555961 PHF8Q9UPP1 1060 aa5.11□□□□□ -1.59
NEK9-208ENST00000555961 MICALL2Q8IY33 904 aa5.1□□□□□ -1.59
NEK9-208ENST00000555961 Q6ZNB5 142 aa5.09□□□□□ -1.59
NEK9-208ENST00000555961 PTGER2P43116 358 aa5.08□□□□□ -1.6
NEK9-208ENST00000555961 RGL2O15211 777 aa5.07□□□□□ -1.6
NEK9-208ENST00000555961 PKD2Q13563 968 aa5.07□□□□□ -1.6
NEK9-208ENST00000555961 MS4A4AQ96JQ5 239 aa5.06□□□□□ -1.6
NEK9-208ENST00000555961 RGS20O76081 388 aa5.05□□□□□ -1.6
NEK9-208ENST00000555961 ERBB3P21860 1342 aa5.04□□□□□ -1.6
NEK9-208ENST00000555961 HOXB3P14651 431 aaPredicted RBP5.04□□□□□ -1.6
NEK9-208ENST00000555961 FBXO22Q8NEZ5 403 aa5.04□□□□□ -1.6
NEK9-208ENST00000555961 ZSWIM6Q9HCJ5 1215 aa5.04□□□□□ -1.6
NEK9-208ENST00000555961 HOXB1P14653 301 aaPredicted RBP5.03□□□□□ -1.6
NEK9-208ENST00000555961 MFRPQ9BY79 579 aa5.03□□□□□ -1.6
NEK9-208ENST00000555961 TMC2Q8TDI7 906 aa5.02□□□□□ -1.61
NEK9-208ENST00000555961 TMEM92Q6UXU6 159 aa5.01□□□□□ -1.61
NEK9-208ENST00000555961 HS6ST3Q8IZP7 471 aa5□□□□□ -1.61
NEK9-208ENST00000555961 CHGAP10645 457 aaKnown RBP4.99□□□□□ -1.61
NEK9-208ENST00000555961 RYDENQ9NUL5 291 aaKnown RBP4.99□□□□□ -1.61
NEK9-208ENST00000555961 VARS2Q5ST30 1063 aaKnown RBP4.98□□□□□ -1.61
NEK9-208ENST00000555961 C2orf72A6NCS6 295 aa4.97□□□□□ -1.61
NEK9-208ENST00000555961 DCAF8L2P0C7V8 631 aa4.97□□□□□ -1.61
NEK9-208ENST00000555961 ARSIQ5FYB1 569 aa4.96□□□□□ -1.62
NEK9-208ENST00000555961 GPR153Q6NV75 609 aa4.95□□□□□ -1.62
NEK9-208ENST00000555961 ZNF316A6NFI3 1004 aaPredicted RBP4.94□□□□□ -1.62
NEK9-208ENST00000555961 KIF3CO14782 793 aa4.94□□□□□ -1.62
NEK9-208ENST00000555961 PPP1R37O75864 691 aa4.93□□□□□ -1.62
NEK9-208ENST00000555961 ZNF687Q8N1G0 1237 aa4.93□□□□□ -1.62
NEK9-208ENST00000555961 HCSTQ9UBK5 93 aa4.93□□□□□ -1.62
NEK9-208ENST00000555961 SLC34A2O95436 690 aa4.92□□□□□ -1.62
NEK9-208ENST00000555961 PCDHGA4Q9Y5G9 962 aa4.92□□□□□ -1.62
NEK9-208ENST00000555961 TBC1D12O60347 775 aa4.91□□□□□ -1.62
NEK9-208ENST00000555961 NUDT7P0C024 238 aa4.91□□□□□ -1.62
NEK9-208ENST00000555961 KHSRPQ92945 711 aaKnown RBP eCLIP4.91□□□□□ -1.62
NEK9-208ENST00000555961 PSDA5PKW4 1024 aaPredicted RBP4.9□□□□□ -1.63
NEK9-208ENST00000555961 PLPP6Q8IY26 295 aa4.9□□□□□ -1.63
NEK9-208ENST00000555961 DNAJC5Q9H3Z4 198 aa4.9□□□□□ -1.63
NEK9-208ENST00000555961 PBX2P40425 430 aa4.89□□□□□ -1.63
NEK9-208ENST00000555961 FOXK1P85037 733 aa4.89□□□□□ -1.63
NEK9-208ENST00000555961 SUZ12Q15022 739 aaKnown RBP4.89□□□□□ -1.63
NEK9-208ENST00000555961 ANKRD13DQ6ZTN6 518 aa4.89□□□□□ -1.63
NEK9-208ENST00000555961 GPHNQ9NQX3 736 aaPredicted RBP4.89□□□□□ -1.63
NEK9-208ENST00000555961 KCNH8Q96L42 1107 aa4.88□□□□□ -1.63
NEK9-208ENST00000555961 LHX6Q9UPM6 363 aa4.88□□□□□ -1.63
NEK9-208ENST00000555961 PTCD2Q8WV60 388 aaKnown RBP4.87□□□□□ -1.63
NEK9-208ENST00000555961 ZNF775Q96BV0 537 aaPredicted RBP4.87□□□□□ -1.63
NEK9-208ENST00000555961 PDE4AP27815 886 aa4.86□□□□□ -1.63
NEK9-208ENST00000555961 LSM11P83369 360 aaKnown RBP eCLIP4.86□□□□□ -1.63
NEK9-208ENST00000555961 DSG2Q14126 1118 aa4.86□□□□□ -1.63
NEK9-208ENST00000555961 NKX1-1Q15270 411 aaPredicted RBP4.86□□□□□ -1.63
NEK9-208ENST00000555961 PPP4R3BQ5MIZ7 849 aa4.86□□□□□ -1.63
NEK9-208ENST00000555961 PPP1R15BQ5SWA1 713 aa4.85□□□□□ -1.63
NEK9-208ENST00000555961 TRAF7Q6Q0C0 670 aa4.85□□□□□ -1.63
NEK9-208ENST00000555961 UPF1Q92900 1129 aaKnown RBP eCLIP4.84□□□□□ -1.63
NEK9-208ENST00000555961 STAC3Q96MF2 364 aa4.84□□□□□ -1.63
NEK9-208ENST00000555961 ARHGAP33O14559 1287 aa4.83□□□□□ -1.64
NEK9-208ENST00000555961 AMER1Q5JTC6 1135 aaPredicted RBP4.83□□□□□ -1.64
NEK9-208ENST00000555961 GTPBP6O43824 516 aaPredicted RBP4.82□□□□□ -1.64
NEK9-208ENST00000555961 DDX27Q96GQ7 796 aaKnown RBP4.82□□□□□ -1.64
NEK9-208ENST00000555961 CRISPLD2Q9H0B8 497 aa4.82□□□□□ -1.64
NEK9-208ENST00000555961 AXIN2Q9Y2T1 843 aa4.82□□□□□ -1.64
NEK9-208ENST00000555961 ZNF787Q6DD87 383 aa4.81□□□□□ -1.64
NEK9-208ENST00000555961 OXER1Q8TDS5 423 aa4.81□□□□□ -1.64
NEK9-208ENST00000555961 LARP6Q9BRS8 491 aaKnown RBP4.81□□□□□ -1.64
NEK9-208ENST00000555961 ZNF454Q8N9F8 522 aa4.8□□□□□ -1.64
NEK9-208ENST00000555961 TK2O00142 265 aa4.79□□□□□ -1.64
NEK9-208ENST00000555961 MAP3K9P80192 1104 aa4.79□□□□□ -1.64
NEK9-208ENST00000555961 ADGRD1Q6QNK2 874 aa4.79□□□□□ -1.64
NEK9-208ENST00000555961 KCNK17Q96T54 332 aa4.79□□□□□ -1.64
NEK9-208ENST00000555961 NCKAP5LQ9HCH0 1330 aa4.78□□□□□ -1.64
NEK9-208ENST00000555961 KDM4FA0A1W2PPD8 638 aa4.78□□□□□ -1.64
NEK9-208ENST00000555961 PSEN2P49810 448 aa4.78□□□□□ -1.64
NEK9-208ENST00000555961 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.78□□□□□ -1.64
NEK9-208ENST00000555961 EVI5O60447 810 aa4.77□□□□□ -1.65
NEK9-208ENST00000555961 PTPREP23469 700 aa4.77□□□□□ -1.65
NEK9-208ENST00000555961 POTEEQ6S8J3 1075 aa4.77□□□□□ -1.65
NEK9-208ENST00000555961 BBXQ8WY36 941 aaPredicted RBP4.77□□□□□ -1.65
NEK9-208ENST00000555961 MFSD10Q14728 455 aa4.76□□□□□ -1.65
NEK9-208ENST00000555961 JPH4Q96JJ6 628 aa4.76□□□□□ -1.65
NEK9-208ENST00000555961 STK17AQ9UEE5 414 aa4.76□□□□□ -1.65
NEK9-208ENST00000555961 GOLGA8CPA6NN73 597 aa4.75□□□□□ -1.65
NEK9-208ENST00000555961 FOSBP53539 338 aa4.75□□□□□ -1.65
NEK9-208ENST00000555961 LAPTM4AQ15012 233 aa4.75□□□□□ -1.65
NEK9-208ENST00000555961 DMRTA1Q5VZB9 504 aa4.75□□□□□ -1.65
NEK9-208ENST00000555961 BCL2L12Q9HB09 334 aa4.75□□□□□ -1.65
NEK9-208ENST00000555961 LCE2BO14633 110 aa4.74□□□□□ -1.65
NEK9-208ENST00000555961 ZDHHC16Q969W1 377 aa4.74□□□□□ -1.65
NEK9-208ENST00000555961 SPRYD3Q8NCJ5 442 aa4.73□□□□□ -1.65
NEK9-208ENST00000555961 KCTD12Q96CX2 325 aaKnown RBP4.73□□□□□ -1.65
NEK9-208ENST00000555961 KRTAP4-8Q9BYQ9 185 aa4.73□□□□□ -1.65
NEK9-208ENST00000555961 ANO8Q9HCE9 1232 aaPredicted RBP4.73□□□□□ -1.65
NEK9-208ENST00000555961 HRO43593 1189 aa4.72□□□□□ -1.65
NEK9-208ENST00000555961 FBXW7Q969H0 707 aa4.72□□□□□ -1.65
NEK9-208ENST00000555961 SLC4A5Q9BY07 1137 aa4.72□□□□□ -1.65
NEK9-208ENST00000555961 NBPF3Q9H094 633 aa4.72□□□□□ -1.65
NEK9-208ENST00000555961 VPS9D1Q9Y2B5 631 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms