RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 AK7Q96M32 723 aa5.88□□□□□ -1.47
MTHFD1-212ENST00000555858 DAXXQ9UER7 740 aaPredicted RBP5.88□□□□□ -1.47
MTHFD1-212ENST00000555858 RBM26Q5T8P6 1007 aaKnown RBP5.87□□□□□ -1.47
MTHFD1-212ENST00000555858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.87□□□□□ -1.471e-8■□□□□ 10.5
MTHFD1-212ENST00000555858 SPDYE16A6NNV3 312 aaPredicted RBP5.86□□□□□ -1.47
MTHFD1-212ENST00000555858 KRI1Q8N9T8 703 aaKnown RBP5.86□□□□□ -1.47
MTHFD1-212ENST00000555858 TTLL13PA6NNM8 815 aa5.85□□□□□ -1.47
MTHFD1-212ENST00000555858 DPYSL4O14531 572 aa5.85□□□□□ -1.47
MTHFD1-212ENST00000555858 PDIA6Q15084 440 aa5.85□□□□□ -1.47
MTHFD1-212ENST00000555858 C19orf67A6NJJ6 358 aa5.84□□□□□ -1.47
MTHFD1-212ENST00000555858 EMILIN3Q9NT22 766 aa5.84□□□□□ -1.47
MTHFD1-212ENST00000555858 DSG2Q14126 1118 aa5.83□□□□□ -1.48
MTHFD1-212ENST00000555858 HOMEZQ8IX15 550 aa5.83□□□□□ -1.48
MTHFD1-212ENST00000555858 GPBP1L1Q9HC44 474 aaPredicted RBP5.83□□□□□ -1.48
MTHFD1-212ENST00000555858 BMP2KQ9NSY1 1161 aaPredicted RBP5.83□□□□□ -1.48
MTHFD1-212ENST00000555858 FOXK1P85037 733 aa5.82□□□□□ -1.48
MTHFD1-212ENST00000555858 TMC2Q8TDI7 906 aa5.82□□□□□ -1.48
MTHFD1-212ENST00000555858 KDM4CQ9H3R0 1056 aa5.82□□□□□ -1.48
MTHFD1-212ENST00000555858 TRIM66O15016 1216 aa5.81□□□□□ -1.48
MTHFD1-212ENST00000555858 MICALL2Q8IY33 904 aa5.81□□□□□ -1.48
MTHFD1-212ENST00000555858 TRIM35Q9UPQ4 493 aa5.81□□□□□ -1.48
MTHFD1-212ENST00000555858 PDE4DQ08499 809 aa5.8□□□□□ -1.48
MTHFD1-212ENST00000555858 DPY19L2Q6NUT2 758 aa5.8□□□□□ -1.48
MTHFD1-212ENST00000555858 IL27Q8NEV9 243 aa5.79□□□□□ -1.48
MTHFD1-212ENST00000555858 GPR37O15354 613 aa5.78□□□□□ -1.48
MTHFD1-212ENST00000555858 PLPP6Q8IY26 295 aa5.78□□□□□ -1.48
MTHFD1-212ENST00000555858 PDCD7Q8N8D1 485 aaKnown RBP5.78□□□□□ -1.48
MTHFD1-212ENST00000555858 SUPT5HO00267 1087 aaKnown RBP5.77□□□□□ -1.49
MTHFD1-212ENST00000555858 CLCN6P51797 869 aa5.77□□□□□ -1.49
MTHFD1-212ENST00000555858 TMEM121BQ9BXQ6 578 aaPredicted RBP5.77□□□□□ -1.49
MTHFD1-212ENST00000555858 MINK1Q8N4C8 1332 aaPredicted RBP5.76□□□□□ -1.49
MTHFD1-212ENST00000555858 G3V3G9 751 aa5.76□□□□□ -1.49
MTHFD1-212ENST00000555858 KIF3CO14782 793 aa5.76□□□□□ -1.49
MTHFD1-212ENST00000555858 GALR2O43603 387 aaPredicted RBP5.76□□□□□ -1.49
MTHFD1-212ENST00000555858 MAP3K9P80192 1104 aa5.76□□□□□ -1.49
MTHFD1-212ENST00000555858 BOLA1Q9Y3E2 137 aa5.76□□□□□ -1.49
MTHFD1-212ENST00000555858 C2orf72A6NCS6 295 aa5.75□□□□□ -1.49
MTHFD1-212ENST00000555858 GRXCR2A6NFK2 248 aa5.75□□□□□ -1.49
MTHFD1-212ENST00000555858 MAP2K5Q13163 448 aa5.75□□□□□ -1.49
MTHFD1-212ENST00000555858 OCEL1Q9H607 264 aa5.75□□□□□ -1.49
MTHFD1-212ENST00000555858 NUTM2FA1L443 756 aa5.74□□□□□ -1.49
MTHFD1-212ENST00000555858 IRX5P78411 483 aaPredicted RBP5.74□□□□□ -1.49
MTHFD1-212ENST00000555858 IER5LQ5T953 404 aa5.74□□□□□ -1.49
MTHFD1-212ENST00000555858 GNPATO15228 680 aa5.73□□□□□ -1.49
MTHFD1-212ENST00000555858 ATN1P54259 1190 aaPredicted RBP5.73□□□□□ -1.49
MTHFD1-212ENST00000555858 AMHR2Q16671 573 aa5.73□□□□□ -1.49
MTHFD1-212ENST00000555858 CCDC102AQ96A19 550 aa5.73□□□□□ -1.49
MTHFD1-212ENST00000555858 IRF6O14896 467 aa5.72□□□□□ -1.49
MTHFD1-212ENST00000555858 OSBPP22059 807 aa5.72□□□□□ -1.49
MTHFD1-212ENST00000555858 PTGER2P43116 358 aa5.72□□□□□ -1.49
MTHFD1-212ENST00000555858 HIC1Q14526 733 aa5.72□□□□□ -1.49
MTHFD1-212ENST00000555858 DDRGK1Q96HY6 314 aa5.72□□□□□ -1.49
MTHFD1-212ENST00000555858 FAM117AQ9C073 453 aa5.72□□□□□ -1.49
MTHFD1-212ENST00000555858 ZMYND15Q9H091 742 aa5.72□□□□□ -1.49
MTHFD1-212ENST00000555858 ZNF316A6NFI3 1004 aaPredicted RBP5.71□□□□□ -1.5
MTHFD1-212ENST00000555858 ATMINO43313 823 aaPredicted RBP5.71□□□□□ -1.5
MTHFD1-212ENST00000555858 FCHSD2O94868 740 aa5.71□□□□□ -1.5
MTHFD1-212ENST00000555858 ASTLQ6HA08 431 aaPredicted RBP5.71□□□□□ -1.5
MTHFD1-212ENST00000555858 OXER1Q8TDS5 423 aa5.71□□□□□ -1.5
MTHFD1-212ENST00000555858 UPF1Q92900 1129 aaKnown RBP eCLIP5.71□□□□□ -1.5
MTHFD1-212ENST00000555858 RSPH6AQ9H0K4 717 aa5.71□□□□□ -1.5
MTHFD1-212ENST00000555858 TBC1D12O60347 775 aa5.7□□□□□ -1.5
MTHFD1-212ENST00000555858 PLCG2P16885 1265 aa5.7□□□□□ -1.5
MTHFD1-212ENST00000555858 L3MBTL3Q96JM7 780 aaPredicted RBP5.7□□□□□ -1.5
MTHFD1-212ENST00000555858 PLEKHG3A1L390 1219 aa5.69□□□□□ -1.5
MTHFD1-212ENST00000555858 PARP9Q8IXQ6 854 aa5.69□□□□□ -1.5
MTHFD1-212ENST00000555858 DDX12PQ92771 950 aa5.69□□□□□ -1.5
MTHFD1-212ENST00000555858 TMEM92Q6UXU6 159 aa5.67□□□□□ -1.5
MTHFD1-212ENST00000555858 GOPCQ9HD26 462 aa5.67□□□□□ -1.5
MTHFD1-212ENST00000555858 HAX1O00165 279 aa5.66□□□□□ -1.5
MTHFD1-212ENST00000555858 EVI5O60447 810 aa5.66□□□□□ -1.5
MTHFD1-212ENST00000555858 FECHP22830 423 aa5.66□□□□□ -1.5
MTHFD1-212ENST00000555858 PTGDRQ13258 359 aa5.66□□□□□ -1.5
MTHFD1-212ENST00000555858 TTLL12Q14166 644 aaPredicted RBP5.66□□□□□ -1.5
MTHFD1-212ENST00000555858 PRIM1P49642 420 aaKnown RBP5.65□□□□□ -1.5
MTHFD1-212ENST00000555858 FLIIQ13045 1269 aa5.65□□□□□ -1.5
MTHFD1-212ENST00000555858 PTCD2Q8WV60 388 aaKnown RBP5.64□□□□□ -1.51
MTHFD1-212ENST00000555858 SEC24BO95487 1268 aa5.63□□□□□ -1.51
MTHFD1-212ENST00000555858 EVX2Q03828 476 aa5.63□□□□□ -1.51
MTHFD1-212ENST00000555858 GIGYF2Q6Y7W6 1299 aaKnown RBP5.63□□□□□ -1.51
MTHFD1-212ENST00000555858 PCMTD1Q96MG8 357 aaPredicted RBP5.62□□□□□ -1.51
MTHFD1-212ENST00000555858 ANO8Q9HCE9 1232 aaPredicted RBP5.62□□□□□ -1.51
MTHFD1-212ENST00000555858 PHF14O94880 888 aa5.61□□□□□ -1.51
MTHFD1-212ENST00000555858 SLC34A2O95436 690 aa5.61□□□□□ -1.51
MTHFD1-212ENST00000555858 MS4A1P11836 297 aa5.61□□□□□ -1.51
MTHFD1-212ENST00000555858 EN1Q05925 392 aaPredicted RBP5.61□□□□□ -1.51
MTHFD1-212ENST00000555858 EPAS1Q99814 870 aa5.61□□□□□ -1.51
MTHFD1-212ENST00000555858 UBTFP17480 764 aaKnown RBP5.6□□□□□ -1.51
MTHFD1-212ENST00000555858 CLCN1P35523 988 aa5.6□□□□□ -1.51
MTHFD1-212ENST00000555858 CDHR5Q9HBB8 845 aa5.6□□□□□ -1.51
MTHFD1-212ENST00000555858 NPDC1Q9NQX5 325 aaPredicted RBP5.6□□□□□ -1.51
MTHFD1-212ENST00000555858 COLQQ9Y215 455 aaPredicted RBP5.6□□□□□ -1.51
MTHFD1-212ENST00000555858 MAP3K7O43318 606 aa5.59□□□□□ -1.51
MTHFD1-212ENST00000555858 ONECUT3O60422 494 aaPredicted RBP5.59□□□□□ -1.51
MTHFD1-212ENST00000555858 SH3D19Q5HYK7 790 aa5.59□□□□□ -1.51
MTHFD1-212ENST00000555858 C3orf67Q6ZVT6 689 aa5.59□□□□□ -1.51
MTHFD1-212ENST00000555858 SLC39A7Q92504 469 aa5.59□□□□□ -1.51
MTHFD1-212ENST00000555858 TMUB1Q9BVT8 246 aa5.59□□□□□ -1.51
MTHFD1-212ENST00000555858 REPIN1Q9BWE0 567 aaKnown RBP5.59□□□□□ -1.51
MTHFD1-212ENST00000555858 GPCPD1Q9NPB8 672 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms