RNA–Protein interactions for RNA: ENST00000555682.1

SEC23A-211, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-211ENST00000555682 RTN4Q9NQC3 1192 aaKnown RBP14.2□□□□□ -0.14
SEC23A-211ENST00000555682 ZNF710Q8N1W2 664 aa14.18□□□□□ -0.14
SEC23A-211ENST00000555682 PCDH10Q9P2E7 1040 aa14.17□□□□□ -0.14
SEC23A-211ENST00000555682 RIMBP2O15034 1052 aa14.16□□□□□ -0.14
SEC23A-211ENST00000555682 TMC2Q8TDI7 906 aa14.15□□□□□ -0.14
SEC23A-211ENST00000555682 MARVELD3Q96A59 401 aa14.15□□□□□ -0.14
SEC23A-211ENST00000555682 C2orf72A6NCS6 295 aa14.14□□□□□ -0.15
SEC23A-211ENST00000555682 KIF3CO14782 793 aa14.14□□□□□ -0.15
SEC23A-211ENST00000555682 EMP3P54852 163 aa14.12□□□□□ -0.15
SEC23A-211ENST00000555682 GTPBP6O43824 516 aaPredicted RBP14.09□□□□□ -0.15
SEC23A-211ENST00000555682 HOXB1P14653 301 aaPredicted RBP14.09□□□□□ -0.15
SEC23A-211ENST00000555682 ZSWIM6Q9HCJ5 1215 aa14.09□□□□□ -0.15
SEC23A-211ENST00000555682 CDAN1Q8IWY9 1227 aa14.05□□□□□ -0.16
SEC23A-211ENST00000555682 FAM205CA6NFA0 338 aa14.01□□□□□ -0.17
SEC23A-211ENST00000555682 BBXQ8WY36 941 aaPredicted RBP14.01□□□□□ -0.17
SEC23A-211ENST00000555682 GPHNQ9NQX3 736 aaPredicted RBP14.01□□□□□ -0.17
SEC23A-211ENST00000555682 GPR153Q6NV75 609 aa14□□□□□ -0.17
SEC23A-211ENST00000555682 HS3ST6Q96QI5 342 aa13.98□□□□□ -0.17
SEC23A-211ENST00000555682 FOXK1P85037 733 aa13.97□□□□□ -0.17
SEC23A-211ENST00000555682 SLC34A2O95436 690 aa13.96□□□□□ -0.17
SEC23A-211ENST00000555682 ARSIQ5FYB1 569 aa13.96□□□□□ -0.17
SEC23A-211ENST00000555682 ERBB3P21860 1342 aa13.95□□□□□ -0.18
SEC23A-211ENST00000555682 PLSCR2Q9NRY7 297 aa13.95□□□□□ -0.18
SEC23A-211ENST00000555682 DSG2Q14126 1118 aa13.93□□□□□ -0.18
SEC23A-211ENST00000555682 PLPP6Q8IY26 295 aa13.93□□□□□ -0.18
SEC23A-211ENST00000555682 CRISPLD2Q9H0B8 497 aa13.93□□□□□ -0.18
SEC23A-211ENST00000555682 POTEB3A0JP26 581 aa13.91□□□□□ -0.18
SEC23A-211ENST00000555682 POTEBQ6S5H4 581 aa13.91□□□□□ -0.18
SEC23A-211ENST00000555682 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.91□□□□□ -0.18
SEC23A-211ENST00000555682 PDE4AP27815 886 aa13.9□□□□□ -0.18
SEC23A-211ENST00000555682 PCDHGA4Q9Y5G9 962 aa13.9□□□□□ -0.18
SEC23A-211ENST00000555682 KHSRPQ92945 711 aaKnown RBP eCLIP13.89□□□□□ -0.196e-12■■■■□ 20.1
SEC23A-211ENST00000555682 VARS2Q5ST30 1063 aaKnown RBP13.88□□□□□ -0.19
SEC23A-211ENST00000555682 NCKAP5LQ9HCH0 1330 aa13.88□□□□□ -0.19
SEC23A-211ENST00000555682 NUDT7P0C024 238 aa13.85□□□□□ -0.19
SEC23A-211ENST00000555682 PPP1R15BQ5SWA1 713 aa13.85□□□□□ -0.19
SEC23A-211ENST00000555682 SPRYD3Q8NCJ5 442 aa13.85□□□□□ -0.19
SEC23A-211ENST00000555682 PTCD2Q8WV60 388 aaKnown RBP13.85□□□□□ -0.19
SEC23A-211ENST00000555682 ZNF316A6NFI3 1004 aaPredicted RBP13.83□□□□□ -0.2
SEC23A-211ENST00000555682 LARP6Q9BRS8 491 aaKnown RBP13.81□□□□□ -0.2
SEC23A-211ENST00000555682 TBC1D12O60347 775 aa13.8□□□□□ -0.2
SEC23A-211ENST00000555682 DDX27Q96GQ7 796 aaKnown RBP13.8□□□□□ -0.2
SEC23A-211ENST00000555682 CADPS2Q86UW7 1296 aa13.79□□□□□ -0.2
SEC23A-211ENST00000555682 KRTAP3-3Q9BYR6 98 aa13.79□□□□□ -0.2
SEC23A-211ENST00000555682 KRTAP3-2Q9BYR7 98 aa13.79□□□□□ -0.2
SEC23A-211ENST00000555682 MFSD10Q14728 455 aa13.77□□□□□ -0.21
SEC23A-211ENST00000555682 ZNF687Q8N1G0 1237 aa13.77□□□□□ -0.21
SEC23A-211ENST00000555682 PAXIP1Q6ZW49 1069 aaPredicted RBP13.76□□□□□ -0.21
SEC23A-211ENST00000555682 LHX6Q9UPM6 363 aa13.76□□□□□ -0.21
SEC23A-211ENST00000555682 CFAP44Q96MT7 982 aa13.75□□□□□ -0.21
SEC23A-211ENST00000555682 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
SEC23A-211ENST00000555682 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
SEC23A-211ENST00000555682 KDM4FA0A1W2PPD8 638 aa13.72□□□□□ -0.21
SEC23A-211ENST00000555682 PSDA5PKW4 1024 aaPredicted RBP13.7□□□□□ -0.22
SEC23A-211ENST00000555682 SPNS2Q8IVW8 549 aa13.69□□□□□ -0.22
SEC23A-211ENST00000555682 PBX2P40425 430 aa13.64□□□□□ -0.23
SEC23A-211ENST00000555682 EMILIN3Q9NT22 766 aa13.61□□□□□ -0.23
SEC23A-211ENST00000555682 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
SEC23A-211ENST00000555682 MMRN1Q13201 1228 aa13.6□□□□□ -0.23
SEC23A-211ENST00000555682 PPP4R3BQ5MIZ7 849 aa13.6□□□□□ -0.23
SEC23A-211ENST00000555682 EVI5O60447 810 aa13.58□□□□□ -0.24
SEC23A-211ENST00000555682 CAMK2BQ13554 666 aa13.58□□□□□ -0.24
SEC23A-211ENST00000555682 LSM11P83369 360 aaKnown RBP eCLIP13.57□□□□□ -0.24
SEC23A-211ENST00000555682 ANO8Q9HCE9 1232 aaPredicted RBP13.55□□□□□ -0.24
SEC23A-211ENST00000555682 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
SEC23A-211ENST00000555682 POTEEQ6S8J3 1075 aa13.54□□□□□ -0.24
SEC23A-211ENST00000555682 ANKRD13DQ6ZTN6 518 aa13.54□□□□□ -0.24
SEC23A-211ENST00000555682 ZNF454Q8N9F8 522 aa13.54□□□□□ -0.24
SEC23A-211ENST00000555682 ARHGAP33O14559 1287 aa13.53□□□□□ -0.24
SEC23A-211ENST00000555682 WDR70Q9NW82 654 aa13.51□□□□□ -0.25
SEC23A-211ENST00000555682 FOSBP53539 338 aa13.5□□□□□ -0.25
SEC23A-211ENST00000555682 PTGER2P43116 358 aa13.49□□□□□ -0.25
SEC23A-211ENST00000555682 JPH4Q96JJ6 628 aa13.49□□□□□ -0.25
SEC23A-211ENST00000555682 KCNH8Q96L42 1107 aa13.49□□□□□ -0.25
SEC23A-211ENST00000555682 DPYSL4O14531 572 aa13.47□□□□□ -0.25
SEC23A-211ENST00000555682 PSEN2P49810 448 aa13.45□□□□□ -0.26
SEC23A-211ENST00000555682 E2F4Q16254 413 aa13.45□□□□□ -0.26
SEC23A-211ENST00000555682 KCNK17Q96T54 332 aa13.45□□□□□ -0.26
SEC23A-211ENST00000555682 BCL2L12Q9HB09 334 aa13.45□□□□□ -0.26
SEC23A-211ENST00000555682 MYT1LQ9UL68 1186 aa13.44□□□□□ -0.26
SEC23A-211ENST00000555682 ZDHHC16Q969W1 377 aa13.43□□□□□ -0.26
SEC23A-211ENST00000555682 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
SEC23A-211ENST00000555682 DMRTA1Q5VZB9 504 aa13.41□□□□□ -0.26
SEC23A-211ENST00000555682 ADGRD1Q6QNK2 874 aa13.41□□□□□ -0.26
SEC23A-211ENST00000555682 RNF166Q96A37 237 aaPredicted RBP13.41□□□□□ -0.26
SEC23A-211ENST00000555682 TK2O00142 265 aa13.4□□□□□ -0.26
SEC23A-211ENST00000555682 PTPREP23469 700 aa13.39□□□□□ -0.27
SEC23A-211ENST00000555682 PCDHGA10Q9Y5H3 936 aa13.39□□□□□ -0.27
SEC23A-211ENST00000555682 PHF14O94880 888 aa13.38□□□□□ -0.27
SEC23A-211ENST00000555682 ADAM33Q9BZ11 813 aa13.38□□□□□ -0.27
SEC23A-211ENST00000555682 PDIA6Q15084 440 aa13.37□□□□□ -0.27
SEC23A-211ENST00000555682 TYW1BQ6NUM6 668 aa13.36□□□□□ -0.27
SEC23A-211ENST00000555682 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
SEC23A-211ENST00000555682 SPDYE16A6NNV3 312 aaPredicted RBP13.35□□□□□ -0.27
SEC23A-211ENST00000555682 ARIH1Q9Y4X5 557 aaPredicted RBP13.35□□□□□ -0.27
SEC23A-211ENST00000555682 PLCB2Q00722 1185 aa13.34□□□□□ -0.27
SEC23A-211ENST00000555682 EPAS1Q99814 870 aa13.34□□□□□ -0.27
SEC23A-211ENST00000555682 HRO43593 1189 aa13.3□□□□□ -0.28
SEC23A-211ENST00000555682 DDX12PQ92771 950 aa13.3□□□□□ -0.28
SEC23A-211ENST00000555682 SLC4A5Q9BY07 1137 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms