RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 MARVELD3Q96A59 401 aa7.84□□□□□ -1.15
GPHN-210ENST00000555668 RIMBP2O15034 1052 aa7.83□□□□□ -1.16
GPHN-210ENST00000555668 RYDENQ9NUL5 291 aaKnown RBP7.83□□□□□ -1.16
GPHN-210ENST00000555668 EMP3P54852 163 aa7.81□□□□□ -1.16
GPHN-210ENST00000555668 AMER1Q5JTC6 1135 aaPredicted RBP7.81□□□□□ -1.16
GPHN-210ENST00000555668 CDAN1Q8IWY9 1227 aa7.81□□□□□ -1.16
GPHN-210ENST00000555668 C2orf72A6NCS6 295 aa7.8□□□□□ -1.16
GPHN-210ENST00000555668 KIF3CO14782 793 aa7.8□□□□□ -1.16
GPHN-210ENST00000555668 HOXB1P14653 301 aaPredicted RBP7.8□□□□□ -1.16
GPHN-210ENST00000555668 TMC2Q8TDI7 906 aa7.8□□□□□ -1.16
GPHN-210ENST00000555668 ZSWIM6Q9HCJ5 1215 aa7.79□□□□□ -1.16
GPHN-210ENST00000555668 PLSCR2Q9NRY7 297 aa7.78□□□□□ -1.16
GPHN-210ENST00000555668 FAM205CA6NFA0 338 aa7.76□□□□□ -1.17
GPHN-210ENST00000555668 RTN4Q9NQC3 1192 aaKnown RBP7.75□□□□□ -1.17
GPHN-210ENST00000555668 GTPBP6O43824 516 aaPredicted RBP7.74□□□□□ -1.17
GPHN-210ENST00000555668 GPR153Q6NV75 609 aa7.74□□□□□ -1.17
GPHN-210ENST00000555668 HS3ST6Q96QI5 342 aa7.74□□□□□ -1.17
GPHN-210ENST00000555668 ERBB3P21860 1342 aa7.73□□□□□ -1.17
GPHN-210ENST00000555668 ARSIQ5FYB1 569 aa7.72□□□□□ -1.17
GPHN-210ENST00000555668 GPHNQ9NQX3 736 aaPredicted RBP7.72□□□□□ -1.17
GPHN-210ENST00000555668 POTEB3A0JP26 581 aa7.71□□□□□ -1.18
GPHN-210ENST00000555668 SLC34A2O95436 690 aa7.71□□□□□ -1.18
GPHN-210ENST00000555668 POTEBQ6S5H4 581 aa7.71□□□□□ -1.18
GPHN-210ENST00000555668 FOXK1P85037 733 aa7.7□□□□□ -1.18
GPHN-210ENST00000555668 VARS2Q5ST30 1063 aaKnown RBP7.68□□□□□ -1.18
GPHN-210ENST00000555668 PLPP6Q8IY26 295 aa7.68□□□□□ -1.18
GPHN-210ENST00000555668 BBXQ8WY36 941 aaPredicted RBP7.68□□□□□ -1.18
GPHN-210ENST00000555668 DSG2Q14126 1118 aa7.67□□□□□ -1.18
GPHN-210ENST00000555668 KHSRPQ92945 711 aaKnown RBP eCLIP7.67□□□□□ -1.18
GPHN-210ENST00000555668 PCDHGA4Q9Y5G9 962 aa7.67□□□□□ -1.18
GPHN-210ENST00000555668 PDE4AP27815 886 aa7.66□□□□□ -1.18
GPHN-210ENST00000555668 CRISPLD2Q9H0B8 497 aa7.66□□□□□ -1.18
GPHN-210ENST00000555668 ZNF316A6NFI3 1004 aaPredicted RBP7.65□□□□□ -1.18
GPHN-210ENST00000555668 NUDT7P0C024 238 aa7.65□□□□□ -1.18
GPHN-210ENST00000555668 PTCD2Q8WV60 388 aaKnown RBP7.64□□□□□ -1.19
GPHN-210ENST00000555668 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
GPHN-210ENST00000555668 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
GPHN-210ENST00000555668 NCKAP5LQ9HCH0 1330 aa7.63□□□□□ -1.19
GPHN-210ENST00000555668 TBC1D12O60347 775 aa7.62□□□□□ -1.19
GPHN-210ENST00000555668 PPP1R15BQ5SWA1 713 aa7.62□□□□□ -1.19
GPHN-210ENST00000555668 ZNF687Q8N1G0 1237 aa7.62□□□□□ -1.19
GPHN-210ENST00000555668 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.62□□□□□ -1.19
GPHN-210ENST00000555668 SPNS2Q8IVW8 549 aa7.61□□□□□ -1.19
GPHN-210ENST00000555668 LHX6Q9UPM6 363 aa7.61□□□□□ -1.19
GPHN-210ENST00000555668 SPRYD3Q8NCJ5 442 aa7.6□□□□□ -1.19
GPHN-210ENST00000555668 LARP6Q9BRS8 491 aaKnown RBP7.6□□□□□ -1.19
GPHN-210ENST00000555668 DDX27Q96GQ7 796 aaKnown RBP7.59□□□□□ -1.19
GPHN-210ENST00000555668 KDM4FA0A1W2PPD8 638 aa7.58□□□□□ -1.2
GPHN-210ENST00000555668 CADPS2Q86UW7 1296 aa7.58□□□□□ -1.2
GPHN-210ENST00000555668 OXER1Q8TDS5 423 aa7.58□□□□□ -1.2
GPHN-210ENST00000555668 PSDA5PKW4 1024 aaPredicted RBP7.57□□□□□ -1.2
GPHN-210ENST00000555668 MFSD10Q14728 455 aa7.57□□□□□ -1.2
GPHN-210ENST00000555668 UPF1Q92900 1129 aaKnown RBP eCLIP7.57□□□□□ -1.21e-6■■■■■ 27.9
GPHN-210ENST00000555668 MMRN1Q13201 1228 aa7.56□□□□□ -1.2
GPHN-210ENST00000555668 PBX2P40425 430 aa7.54□□□□□ -1.2
GPHN-210ENST00000555668 PAXIP1Q6ZW49 1069 aaPredicted RBP7.54□□□□□ -1.2
GPHN-210ENST00000555668 CFAP44Q96MT7 982 aa7.53□□□□□ -1.2
GPHN-210ENST00000555668 ANKRD13DQ6ZTN6 518 aa7.51□□□□□ -1.21
GPHN-210ENST00000555668 MAP3K9P80192 1104 aa7.5□□□□□ -1.21
GPHN-210ENST00000555668 LSM11P83369 360 aaKnown RBP eCLIP7.5□□□□□ -1.21
GPHN-210ENST00000555668 PPP4R3BQ5MIZ7 849 aa7.5□□□□□ -1.21
GPHN-210ENST00000555668 EVI5O60447 810 aa7.49□□□□□ -1.21
GPHN-210ENST00000555668 POTEEQ6S8J3 1075 aa7.49□□□□□ -1.21
GPHN-210ENST00000555668 EMILIN3Q9NT22 766 aa7.49□□□□□ -1.21
GPHN-210ENST00000555668 AXIN2Q9Y2T1 843 aa7.49□□□□□ -1.21
GPHN-210ENST00000555668 ARHGAP33O14559 1287 aa7.48□□□□□ -1.21
GPHN-210ENST00000555668 ANO8Q9HCE9 1232 aaPredicted RBP7.48□□□□□ -1.21
GPHN-210ENST00000555668 CAMK2BQ13554 666 aa7.47□□□□□ -1.21
GPHN-210ENST00000555668 PTGER2P43116 358 aa7.46□□□□□ -1.22
GPHN-210ENST00000555668 ZNF454Q8N9F8 522 aa7.46□□□□□ -1.22
GPHN-210ENST00000555668 FOSBP53539 338 aa7.45□□□□□ -1.22
GPHN-210ENST00000555668 MYT1LQ9UL68 1186 aa7.45□□□□□ -1.22
GPHN-210ENST00000555668 KCNH8Q96L42 1107 aa7.44□□□□□ -1.22
GPHN-210ENST00000555668 PSEN2P49810 448 aa7.43□□□□□ -1.22
GPHN-210ENST00000555668 MYT1Q01538 1121 aa7.43□□□□□ -1.22
GPHN-210ENST00000555668 RNF166Q96A37 237 aaPredicted RBP7.43□□□□□ -1.22
GPHN-210ENST00000555668 JPH4Q96JJ6 628 aa7.43□□□□□ -1.22
GPHN-210ENST00000555668 KCNK17Q96T54 332 aa7.42□□□□□ -1.22
GPHN-210ENST00000555668 WDR70Q9NW82 654 aa7.42□□□□□ -1.22
GPHN-210ENST00000555668 TK2O00142 265 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 DPYSL4O14531 572 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 DMRTA1Q5VZB9 504 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 ADGRD1Q6QNK2 874 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 ZDHHC16Q969W1 377 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 BCL2L12Q9HB09 334 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 PTPREP23469 700 aa7.39□□□□□ -1.23
GPHN-210ENST00000555668 E2F4Q16254 413 aa7.39□□□□□ -1.23
GPHN-210ENST00000555668 ADAM33Q9BZ11 813 aa7.38□□□□□ -1.23
GPHN-210ENST00000555668 PCDHGA10Q9Y5H3 936 aa7.38□□□□□ -1.23
GPHN-210ENST00000555668 PHF14O94880 888 aa7.37□□□□□ -1.23
GPHN-210ENST00000555668 TSHZ2Q9NRE2 1034 aa7.37□□□□□ -1.23
GPHN-210ENST00000555668 TYW1BQ6NUM6 668 aa7.36□□□□□ -1.23
GPHN-210ENST00000555668 FBXW7Q969H0 707 aa7.36□□□□□ -1.23
GPHN-210ENST00000555668 STAC3Q96MF2 364 aa7.36□□□□□ -1.23
GPHN-210ENST00000555668 SPDYE16A6NNV3 312 aaPredicted RBP7.35□□□□□ -1.23
GPHN-210ENST00000555668 HRO43593 1189 aa7.35□□□□□ -1.23
GPHN-210ENST00000555668 EPAS1Q99814 870 aa7.35□□□□□ -1.23
GPHN-210ENST00000555668 SLC4A5Q9BY07 1137 aa7.35□□□□□ -1.23
GPHN-210ENST00000555668 VPS9D1Q9Y2B5 631 aa7.35□□□□□ -1.23
GPHN-210ENST00000555668 PDIA6Q15084 440 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms