RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 MARVELD3Q96A59 401 aa7.84□□□□□ -1.15
GPHN-210ENST00000555668 RIMBP2O15034 1052 aa7.83□□□□□ -1.16
GPHN-210ENST00000555668 RYDENQ9NUL5 291 aaKnown RBP7.83□□□□□ -1.16
GPHN-210ENST00000555668 EMP3P54852 163 aa7.81□□□□□ -1.16
GPHN-210ENST00000555668 AMER1Q5JTC6 1135 aaPredicted RBP7.81□□□□□ -1.16
GPHN-210ENST00000555668 CDAN1Q8IWY9 1227 aa7.81□□□□□ -1.16
GPHN-210ENST00000555668 C2orf72A6NCS6 295 aa7.8□□□□□ -1.16
GPHN-210ENST00000555668 KIF3CO14782 793 aa7.8□□□□□ -1.16
GPHN-210ENST00000555668 HOXB1P14653 301 aaPredicted RBP7.8□□□□□ -1.16
GPHN-210ENST00000555668 TMC2Q8TDI7 906 aa7.8□□□□□ -1.16
GPHN-210ENST00000555668 ZSWIM6Q9HCJ5 1215 aa7.79□□□□□ -1.16
GPHN-210ENST00000555668 PLSCR2Q9NRY7 297 aa7.78□□□□□ -1.16
GPHN-210ENST00000555668 FAM205CA6NFA0 338 aa7.76□□□□□ -1.17
GPHN-210ENST00000555668 RTN4Q9NQC3 1192 aaKnown RBP7.75□□□□□ -1.17
GPHN-210ENST00000555668 GTPBP6O43824 516 aaPredicted RBP7.74□□□□□ -1.17
GPHN-210ENST00000555668 GPR153Q6NV75 609 aa7.74□□□□□ -1.17
GPHN-210ENST00000555668 HS3ST6Q96QI5 342 aa7.74□□□□□ -1.17
GPHN-210ENST00000555668 ERBB3P21860 1342 aa7.73□□□□□ -1.17
GPHN-210ENST00000555668 ARSIQ5FYB1 569 aa7.72□□□□□ -1.17
GPHN-210ENST00000555668 GPHNQ9NQX3 736 aaPredicted RBP7.72□□□□□ -1.17
GPHN-210ENST00000555668 POTEB3A0JP26 581 aa7.71□□□□□ -1.18
GPHN-210ENST00000555668 SLC34A2O95436 690 aa7.71□□□□□ -1.18
GPHN-210ENST00000555668 POTEBQ6S5H4 581 aa7.71□□□□□ -1.18
GPHN-210ENST00000555668 FOXK1P85037 733 aa7.7□□□□□ -1.18
GPHN-210ENST00000555668 VARS2Q5ST30 1063 aaKnown RBP7.68□□□□□ -1.18
GPHN-210ENST00000555668 PLPP6Q8IY26 295 aa7.68□□□□□ -1.18
GPHN-210ENST00000555668 BBXQ8WY36 941 aaPredicted RBP7.68□□□□□ -1.18
GPHN-210ENST00000555668 DSG2Q14126 1118 aa7.67□□□□□ -1.18
GPHN-210ENST00000555668 KHSRPQ92945 711 aaKnown RBP eCLIP7.67□□□□□ -1.18
GPHN-210ENST00000555668 PCDHGA4Q9Y5G9 962 aa7.67□□□□□ -1.18
GPHN-210ENST00000555668 PDE4AP27815 886 aa7.66□□□□□ -1.18
GPHN-210ENST00000555668 CRISPLD2Q9H0B8 497 aa7.66□□□□□ -1.18
GPHN-210ENST00000555668 ZNF316A6NFI3 1004 aaPredicted RBP7.65□□□□□ -1.18
GPHN-210ENST00000555668 NUDT7P0C024 238 aa7.65□□□□□ -1.18
GPHN-210ENST00000555668 PTCD2Q8WV60 388 aaKnown RBP7.64□□□□□ -1.19
GPHN-210ENST00000555668 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
GPHN-210ENST00000555668 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
GPHN-210ENST00000555668 NCKAP5LQ9HCH0 1330 aa7.63□□□□□ -1.19
GPHN-210ENST00000555668 TBC1D12O60347 775 aa7.62□□□□□ -1.19
GPHN-210ENST00000555668 PPP1R15BQ5SWA1 713 aa7.62□□□□□ -1.19
GPHN-210ENST00000555668 ZNF687Q8N1G0 1237 aa7.62□□□□□ -1.19
GPHN-210ENST00000555668 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.62□□□□□ -1.19
GPHN-210ENST00000555668 SPNS2Q8IVW8 549 aa7.61□□□□□ -1.19
GPHN-210ENST00000555668 LHX6Q9UPM6 363 aa7.61□□□□□ -1.19
GPHN-210ENST00000555668 SPRYD3Q8NCJ5 442 aa7.6□□□□□ -1.19
GPHN-210ENST00000555668 LARP6Q9BRS8 491 aaKnown RBP7.6□□□□□ -1.19
GPHN-210ENST00000555668 DDX27Q96GQ7 796 aaKnown RBP7.59□□□□□ -1.19
GPHN-210ENST00000555668 KDM4FA0A1W2PPD8 638 aa7.58□□□□□ -1.2
GPHN-210ENST00000555668 CADPS2Q86UW7 1296 aa7.58□□□□□ -1.2
GPHN-210ENST00000555668 OXER1Q8TDS5 423 aa7.58□□□□□ -1.2
GPHN-210ENST00000555668 PSDA5PKW4 1024 aaPredicted RBP7.57□□□□□ -1.2
GPHN-210ENST00000555668 MFSD10Q14728 455 aa7.57□□□□□ -1.2
GPHN-210ENST00000555668 UPF1Q92900 1129 aaKnown RBP eCLIP7.57□□□□□ -1.21e-6■■■■■ 27.9
GPHN-210ENST00000555668 MMRN1Q13201 1228 aa7.56□□□□□ -1.2
GPHN-210ENST00000555668 PBX2P40425 430 aa7.54□□□□□ -1.2
GPHN-210ENST00000555668 PAXIP1Q6ZW49 1069 aaPredicted RBP7.54□□□□□ -1.2
GPHN-210ENST00000555668 CFAP44Q96MT7 982 aa7.53□□□□□ -1.2
GPHN-210ENST00000555668 ANKRD13DQ6ZTN6 518 aa7.51□□□□□ -1.21
GPHN-210ENST00000555668 MAP3K9P80192 1104 aa7.5□□□□□ -1.21
GPHN-210ENST00000555668 LSM11P83369 360 aaKnown RBP eCLIP7.5□□□□□ -1.21
GPHN-210ENST00000555668 PPP4R3BQ5MIZ7 849 aa7.5□□□□□ -1.21
GPHN-210ENST00000555668 EVI5O60447 810 aa7.49□□□□□ -1.21
GPHN-210ENST00000555668 POTEEQ6S8J3 1075 aa7.49□□□□□ -1.21
GPHN-210ENST00000555668 EMILIN3Q9NT22 766 aa7.49□□□□□ -1.21
GPHN-210ENST00000555668 AXIN2Q9Y2T1 843 aa7.49□□□□□ -1.21
GPHN-210ENST00000555668 ARHGAP33O14559 1287 aa7.48□□□□□ -1.21
GPHN-210ENST00000555668 ANO8Q9HCE9 1232 aaPredicted RBP7.48□□□□□ -1.21
GPHN-210ENST00000555668 CAMK2BQ13554 666 aa7.47□□□□□ -1.21
GPHN-210ENST00000555668 PTGER2P43116 358 aa7.46□□□□□ -1.22
GPHN-210ENST00000555668 ZNF454Q8N9F8 522 aa7.46□□□□□ -1.22
GPHN-210ENST00000555668 FOSBP53539 338 aa7.45□□□□□ -1.22
GPHN-210ENST00000555668 MYT1LQ9UL68 1186 aa7.45□□□□□ -1.22
GPHN-210ENST00000555668 KCNH8Q96L42 1107 aa7.44□□□□□ -1.22
GPHN-210ENST00000555668 PSEN2P49810 448 aa7.43□□□□□ -1.22
GPHN-210ENST00000555668 MYT1Q01538 1121 aa7.43□□□□□ -1.22
GPHN-210ENST00000555668 RNF166Q96A37 237 aaPredicted RBP7.43□□□□□ -1.22
GPHN-210ENST00000555668 JPH4Q96JJ6 628 aa7.43□□□□□ -1.22
GPHN-210ENST00000555668 KCNK17Q96T54 332 aa7.42□□□□□ -1.22
GPHN-210ENST00000555668 WDR70Q9NW82 654 aa7.42□□□□□ -1.22
GPHN-210ENST00000555668 TK2O00142 265 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 DPYSL4O14531 572 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 DMRTA1Q5VZB9 504 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 ADGRD1Q6QNK2 874 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 ZDHHC16Q969W1 377 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 BCL2L12Q9HB09 334 aa7.41□□□□□ -1.22
GPHN-210ENST00000555668 PTPREP23469 700 aa7.39□□□□□ -1.23
GPHN-210ENST00000555668 E2F4Q16254 413 aa7.39□□□□□ -1.23
GPHN-210ENST00000555668 ADAM33Q9BZ11 813 aa7.38□□□□□ -1.23
GPHN-210ENST00000555668 PCDHGA10Q9Y5H3 936 aa7.38□□□□□ -1.23
GPHN-210ENST00000555668 PHF14O94880 888 aa7.37□□□□□ -1.23
GPHN-210ENST00000555668 TSHZ2Q9NRE2 1034 aa7.37□□□□□ -1.23
GPHN-210ENST00000555668 TYW1BQ6NUM6 668 aa7.36□□□□□ -1.23
GPHN-210ENST00000555668 FBXW7Q969H0 707 aa7.36□□□□□ -1.23
GPHN-210ENST00000555668 STAC3Q96MF2 364 aa7.36□□□□□ -1.23
GPHN-210ENST00000555668 SPDYE16A6NNV3 312 aaPredicted RBP7.35□□□□□ -1.23
GPHN-210ENST00000555668 HRO43593 1189 aa7.35□□□□□ -1.23
GPHN-210ENST00000555668 EPAS1Q99814 870 aa7.35□□□□□ -1.23
GPHN-210ENST00000555668 SLC4A5Q9BY07 1137 aa7.35□□□□□ -1.23
GPHN-210ENST00000555668 VPS9D1Q9Y2B5 631 aa7.35□□□□□ -1.23
GPHN-210ENST00000555668 PDIA6Q15084 440 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms