RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 CERKQ8TCT0 537 aa14.84□□□□□ -0.03
SIX1-204ENST00000555627 PCGF6Q9BYE7 350 aa14.84□□□□□ -0.03
SIX1-204ENST00000555627 TTC37Q6PGP7 1564 aa14.84□□□□□ -0.03
SIX1-204ENST00000555627 CROCC2H7BZ55 1655 aa14.82□□□□□ -0.04
SIX1-204ENST00000555627 CDC42BPBQ9Y5S2 1711 aa14.82□□□□□ -0.04
SIX1-204ENST00000555627 MYOM3Q5VTT5 1437 aa14.82□□□□□ -0.04
SIX1-204ENST00000555627 FGD6Q6ZV73 1430 aa14.82□□□□□ -0.04
SIX1-204ENST00000555627 MYO5CQ9NQX4 1742 aa14.81□□□□□ -0.04
SIX1-204ENST00000555627 ATP1B4Q9UN42 357 aaPredicted RBP14.81□□□□□ -0.04
SIX1-204ENST00000555627 TCOF1Q13428 1488 aaKnown RBP14.81□□□□□ -0.04
SIX1-204ENST00000555627 CCNB3Q8WWL7 1395 aa14.78□□□□□ -0.04
SIX1-204ENST00000555627 ARID3CA6NKF2 412 aa14.78□□□□□ -0.04
SIX1-204ENST00000555627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.76□□□□□ -0.05
SIX1-204ENST00000555627 DNMT1P26358 1616 aaKnown RBP14.75□□□□□ -0.05
SIX1-204ENST00000555627 GCC2Q8IWJ2 1684 aa14.74□□□□□ -0.05
SIX1-204ENST00000555627 ABCA9Q8IUA7 1624 aa14.74□□□□□ -0.05
SIX1-204ENST00000555627 ADGBQ8N7X0 1667 aa14.73□□□□□ -0.05
SIX1-204ENST00000555627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.73□□□□□ -0.05
SIX1-204ENST00000555627 GPATCH8Q9UKJ3 1502 aaKnown RBP14.72□□□□□ -0.05
SIX1-204ENST00000555627 MIA2Q96PC5 1412 aa14.72□□□□□ -0.05
SIX1-204ENST00000555627 SAMD9LQ8IVG5 1584 aa14.72□□□□□ -0.05
SIX1-204ENST00000555627 WDR7Q9Y4E6 1490 aa14.71□□□□□ -0.05
SIX1-204ENST00000555627 GLI2P10070 1586 aa14.71□□□□□ -0.05
SIX1-204ENST00000555627 CAMSAP2Q08AD1 1489 aa14.7□□□□□ -0.06
SIX1-204ENST00000555627 PTPRMP28827 1452 aa14.69□□□□□ -0.06
SIX1-204ENST00000555627 ARAP3Q8WWN8 1544 aa14.66□□□□□ -0.06
SIX1-204ENST00000555627 PTPRKQ15262 1439 aa14.66□□□□□ -0.06
SIX1-204ENST00000555627 ARHGEF5Q12774 1597 aa14.65□□□□□ -0.06
SIX1-204ENST00000555627 ASXL2Q76L83 1435 aa14.65□□□□□ -0.06
SIX1-204ENST00000555627 TEX14Q8IWB6 1497 aa14.64□□□□□ -0.07
SIX1-204ENST00000555627 CDK11AQ9UQ88 783 aaPredicted RBP14.64□□□□□ -0.07
SIX1-204ENST00000555627 ABCC1P33527 1531 aa14.63□□□□□ -0.07
SIX1-204ENST00000555627 MAP3K4Q9Y6R4 1608 aa14.62□□□□□ -0.07
SIX1-204ENST00000555627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.61□□□□□ -0.07
SIX1-204ENST00000555627 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
SIX1-204ENST00000555627 SYCP2Q9BX26 1530 aa14.61□□□□□ -0.07
SIX1-204ENST00000555627 AKNAQ7Z591 1439 aa14.6□□□□□ -0.07
SIX1-204ENST00000555627 ARHGAP5Q13017 1502 aa14.6□□□□□ -0.07
SIX1-204ENST00000555627 DAPK1P53355 1430 aa14.59□□□□□ -0.07
SIX1-204ENST00000555627 SHANK2Q9UPX8 1470 aa14.59□□□□□ -0.07
SIX1-204ENST00000555627 PLEKHD1A6NEE1 506 aa14.59□□□□□ -0.07
SIX1-204ENST00000555627 HSPA2P54652 639 aa14.59□□□□□ -0.07
SIX1-204ENST00000555627 MAST1Q9Y2H9 1570 aa14.59□□□□□ -0.07
SIX1-204ENST00000555627 CFAP74Q9C0B2 1584 aa14.58□□□□□ -0.08
SIX1-204ENST00000555627 ADAMTSL3P82987 1691 aa14.58□□□□□ -0.08
SIX1-204ENST00000555627 ABCC5O15440 1437 aa14.57□□□□□ -0.08
SIX1-204ENST00000555627 ADGRL2O95490 1459 aa14.57□□□□□ -0.08
SIX1-204ENST00000555627 MBD5Q9P267 1494 aa14.56□□□□□ -0.08
SIX1-204ENST00000555627 HFM1A2PYH4 1435 aa14.55□□□□□ -0.08
SIX1-204ENST00000555627 PLCH2O75038 1416 aa14.55□□□□□ -0.08
SIX1-204ENST00000555627 PLXNC1O60486 1568 aa14.55□□□□□ -0.08
SIX1-204ENST00000555627 FAM50AQ14320 339 aaKnown RBP14.54□□□□□ -0.08
SIX1-204ENST00000555627 ARHGEF12Q9NZN5 1544 aa14.54□□□□□ -0.08
SIX1-204ENST00000555627 INO80Q9ULG1 1556 aaPredicted RBP14.53□□□□□ -0.08
SIX1-204ENST00000555627 ZNF644Q9H582 1327 aaPredicted RBP14.53□□□□□ -0.08
SIX1-204ENST00000555627 CCDC141Q6ZP82 1450 aa14.52□□□□□ -0.08
SIX1-204ENST00000555627 NAIPQ13075 1403 aa14.52□□□□□ -0.08
SIX1-204ENST00000555627 ZFYVE16Q7Z3T8 1539 aa14.5□□□□□ -0.09
SIX1-204ENST00000555627 PLEKHH2Q8IVE3 1493 aa14.5□□□□□ -0.09
SIX1-204ENST00000555627 RAB3GAP2Q9H2M9 1393 aa14.49□□□□□ -0.09
SIX1-204ENST00000555627 RICTORQ6R327 1708 aa14.49□□□□□ -0.09
SIX1-204ENST00000555627 SETD5Q9C0A6 1442 aa14.49□□□□□ -0.09
SIX1-204ENST00000555627 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
SIX1-204ENST00000555627 KIAA1107Q9UPP5 1409 aa14.48□□□□□ -0.09
SIX1-204ENST00000555627 ROCK1Q13464 1354 aa14.47□□□□□ -0.09
SIX1-204ENST00000555627 FANCAO15360 1455 aa14.47□□□□□ -0.09
SIX1-204ENST00000555627 MADDQ8WXG6 1647 aa14.47□□□□□ -0.09
SIX1-204ENST00000555627 C9orf84Q5VXU9 1444 aa14.47□□□□□ -0.09
SIX1-204ENST00000555627 KDM5CP41229 1560 aa14.47□□□□□ -0.09
SIX1-204ENST00000555627 ITGAEP38570 1179 aa14.46□□□□□ -0.09
SIX1-204ENST00000555627 FRMPD1Q5SYB0 1578 aa14.46□□□□□ -0.09
SIX1-204ENST00000555627 KIDINS220Q9ULH0 1771 aa14.45□□□□□ -0.1
SIX1-204ENST00000555627 DHX57Q6P158 1386 aaKnown RBP14.44□□□□□ -0.1
SIX1-204ENST00000555627 UNC13BO14795 1591 aa14.43□□□□□ -0.1
SIX1-204ENST00000555627 NCOA1Q15788 1441 aa14.42□□□□□ -0.1
SIX1-204ENST00000555627 KCNH8Q96L42 1107 aa14.42□□□□□ -0.1
SIX1-204ENST00000555627 TRAPPC8Q9Y2L5 1435 aa14.41□□□□□ -0.1
SIX1-204ENST00000555627 BCORL1Q5H9F3 1711 aa14.41□□□□□ -0.1
SIX1-204ENST00000555627 ATP7AQ04656 1500 aa14.41□□□□□ -0.1
SIX1-204ENST00000555627 DENND4BO75064 1496 aaPredicted RBP14.4□□□□□ -0.1
SIX1-204ENST00000555627 NEO1Q92859 1461 aa14.4□□□□□ -0.1
SIX1-204ENST00000555627 HRCP23327 699 aa14.4□□□□□ -0.1
SIX1-204ENST00000555627 ABCA6Q8N139 1617 aa14.4□□□□□ -0.1
SIX1-204ENST00000555627 KDM5DQ9BY66 1539 aa14.4□□□□□ -0.1
SIX1-204ENST00000555627 CD109Q6YHK3 1445 aa14.4□□□□□ -0.1
SIX1-204ENST00000555627 DEPDC5O75140 1603 aa14.39□□□□□ -0.11
SIX1-204ENST00000555627 ZNF777Q9ULD5 760 aaPredicted RBP14.38□□□□□ -0.11
SIX1-204ENST00000555627 POGZQ7Z3K3 1410 aa14.38□□□□□ -0.11
SIX1-204ENST00000555627 EIF2AK4Q9P2K8 1649 aaKnown RBP14.37□□□□□ -0.11
SIX1-204ENST00000555627 MAGI2Q86UL8 1455 aa14.37□□□□□ -0.11
SIX1-204ENST00000555627 RIMS1Q86UR5 1692 aaKnown RBP14.36□□□□□ -0.11
SIX1-204ENST00000555627 ZMYM4Q5VZL5 1548 aa14.36□□□□□ -0.11
SIX1-204ENST00000555627 MED1Q15648 1581 aaPredicted RBP14.36□□□□□ -0.11
SIX1-204ENST00000555627 MROH1Q8NDA8 1641 aa14.35□□□□□ -0.11
SIX1-204ENST00000555627 DUOX2Q9NRD8 1548 aa14.35□□□□□ -0.11
SIX1-204ENST00000555627 IQGAP3Q86VI3 1631 aa14.34□□□□□ -0.11
SIX1-204ENST00000555627 PZPP20742 1482 aa14.34□□□□□ -0.11
SIX1-204ENST00000555627 ZNF518AQ6AHZ1 1483 aa14.34□□□□□ -0.11
SIX1-204ENST00000555627 CHIC2Q9UKJ5 165 aa14.34□□□□□ -0.11
SIX1-204ENST00000555627 DIP2CQ9Y2E4 1556 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms