RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
PAX3-210ENST00000555548 SPDYE16A6NNV3 312 aaPredicted RBP12.41□□□□□ -0.42
PAX3-210ENST00000555548 GOLGA2Q08379 1002 aa12.41□□□□□ -0.42
PAX3-210ENST00000555548 GPHNQ9NQX3 736 aaPredicted RBP12.41□□□□□ -0.42
PAX3-210ENST00000555548 PODXL2Q9NZ53 605 aa12.4□□□□□ -0.42
PAX3-210ENST00000555548 PDIA6Q15084 440 aa12.37□□□□□ -0.43
PAX3-210ENST00000555548 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
PAX3-210ENST00000555548 DPYSL4O14531 572 aa12.36□□□□□ -0.43
PAX3-210ENST00000555548 GPR37O15354 613 aa12.36□□□□□ -0.43
PAX3-210ENST00000555548 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
PAX3-210ENST00000555548 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
PAX3-210ENST00000555548 FAM117AQ9C073 453 aa12.33□□□□□ -0.44
PAX3-210ENST00000555548 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
PAX3-210ENST00000555548 ILDR1Q86SU0 546 aaPredicted RBP12.32□□□□□ -0.44
PAX3-210ENST00000555548 PHF12Q96QT6 1004 aa12.32□□□□□ -0.44
PAX3-210ENST00000555548 MINK1Q8N4C8 1332 aaPredicted RBP12.31□□□□□ -0.44
PAX3-210ENST00000555548 DDRGK1Q96HY6 314 aa12.29□□□□□ -0.44
PAX3-210ENST00000555548 PLEKHG3A1L390 1219 aa12.28□□□□□ -0.44
PAX3-210ENST00000555548 ZNF316A6NFI3 1004 aaPredicted RBP12.28□□□□□ -0.44
PAX3-210ENST00000555548 DSG2Q14126 1118 aa12.28□□□□□ -0.44
PAX3-210ENST00000555548 MAP2K5Q13163 448 aa12.26□□□□□ -0.45
PAX3-210ENST00000555548 C1orf115Q9H7X2 142 aa12.26□□□□□ -0.45
PAX3-210ENST00000555548 AMHR2Q16671 573 aa12.25□□□□□ -0.45
PAX3-210ENST00000555548 CD44P16070 742 aaKnown RBP12.24□□□□□ -0.45
PAX3-210ENST00000555548 FLIIQ13045 1269 aa12.24□□□□□ -0.45
PAX3-210ENST00000555548 CCDC102AQ96A19 550 aa12.24□□□□□ -0.45
PAX3-210ENST00000555548 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
PAX3-210ENST00000555548 IRF6O14896 467 aa12.23□□□□□ -0.45
PAX3-210ENST00000555548 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
PAX3-210ENST00000555548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.23□□□□□ -0.45
PAX3-210ENST00000555548 FOXK1P85037 733 aa12.22□□□□□ -0.45
PAX3-210ENST00000555548 PIP4P2Q8N4L2 257 aa12.22□□□□□ -0.45
PAX3-210ENST00000555548 PARP9Q8IXQ6 854 aa12.21□□□□□ -0.45
PAX3-210ENST00000555548 NUTM2FA1L443 756 aa12.2□□□□□ -0.46
PAX3-210ENST00000555548 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
PAX3-210ENST00000555548 TMC2Q8TDI7 906 aa12.19□□□□□ -0.46
PAX3-210ENST00000555548 ARID3AQ99856 593 aa12.19□□□□□ -0.46
PAX3-210ENST00000555548 GOPCQ9HD26 462 aa12.19□□□□□ -0.46
PAX3-210ENST00000555548 GNPATO15228 680 aa12.17□□□□□ -0.46
PAX3-210ENST00000555548 TIE1P35590 1138 aa12.17□□□□□ -0.46
PAX3-210ENST00000555548 GRXCR2A6NFK2 248 aa12.16□□□□□ -0.46
PAX3-210ENST00000555548 HRCP23327 699 aa12.16□□□□□ -0.46
PAX3-210ENST00000555548 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
PAX3-210ENST00000555548 APBB1O00213 710 aa12.15□□□□□ -0.46
PAX3-210ENST00000555548 PLPP6Q8IY26 295 aa12.15□□□□□ -0.46
PAX3-210ENST00000555548 TTLL13PA6NNM8 815 aa12.14□□□□□ -0.47
PAX3-210ENST00000555548 ONECUT3O60422 494 aaPredicted RBP12.14□□□□□ -0.47
PAX3-210ENST00000555548 OSBPP22059 807 aa12.14□□□□□ -0.47
PAX3-210ENST00000555548 RANGAP1P46060 587 aaPredicted RBP12.14□□□□□ -0.47
PAX3-210ENST00000555548 HIC1Q14526 733 aa12.14□□□□□ -0.47
PAX3-210ENST00000555548 ARID3CA6NKF2 412 aa12.13□□□□□ -0.47
PAX3-210ENST00000555548 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
PAX3-210ENST00000555548 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
PAX3-210ENST00000555548 FCHSD2O94868 740 aa12.12□□□□□ -0.47
PAX3-210ENST00000555548 MAP3K9P80192 1104 aa12.11□□□□□ -0.47
PAX3-210ENST00000555548 A6NJR5 290 aa12.1□□□□□ -0.47
PAX3-210ENST00000555548 FECHP22830 423 aa12.09□□□□□ -0.47
PAX3-210ENST00000555548 PTGER2P43116 358 aa12.09□□□□□ -0.47
PAX3-210ENST00000555548 KIF3CO14782 793 aa12.08□□□□□ -0.48
PAX3-210ENST00000555548 TTLL12Q14166 644 aaPredicted RBP12.07□□□□□ -0.48
PAX3-210ENST00000555548 BMP2KQ9NSY1 1161 aaPredicted RBP12.07□□□□□ -0.48
PAX3-210ENST00000555548 C2orf72A6NCS6 295 aa12.06□□□□□ -0.48
PAX3-210ENST00000555548 TMEM121BQ9BXQ6 578 aaPredicted RBP12.06□□□□□ -0.48
PAX3-210ENST00000555548 PCMTD1Q96MG8 357 aaPredicted RBP12.05□□□□□ -0.48
PAX3-210ENST00000555548 TRAK2O60296 914 aa12.04□□□□□ -0.48
PAX3-210ENST00000555548 PDCD7Q8N8D1 485 aaKnown RBP12.04□□□□□ -0.48
PAX3-210ENST00000555548 TRIM35Q9UPQ4 493 aa12.04□□□□□ -0.48
PAX3-210ENST00000555548 GIGYF2Q6Y7W6 1299 aaKnown RBP12.03□□□□□ -0.48
PAX3-210ENST00000555548 MS4A1P11836 297 aa12.02□□□□□ -0.49
PAX3-210ENST00000555548 PTGDRQ13258 359 aa12.01□□□□□ -0.49
PAX3-210ENST00000555548 OXER1Q8TDS5 423 aa12.01□□□□□ -0.49
PAX3-210ENST00000555548 DDX12PQ92771 950 aa12□□□□□ -0.49
PAX3-210ENST00000555548 CLUAP1Q96AJ1 413 aa12□□□□□ -0.49
PAX3-210ENST00000555548 PDIA4P13667 645 aaKnown RBP11.99□□□□□ -0.49
PAX3-210ENST00000555548 UPF1Q92900 1129 aaKnown RBP eCLIP11.99□□□□□ -0.49
PAX3-210ENST00000555548 BOLA1Q9Y3E2 137 aa11.99□□□□□ -0.49
PAX3-210ENST00000555548 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
PAX3-210ENST00000555548 SH3D19Q5HYK7 790 aa11.98□□□□□ -0.49
PAX3-210ENST00000555548 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
PAX3-210ENST00000555548 MCM6Q14566 821 aa11.97□□□□□ -0.49
PAX3-210ENST00000555548 CCDC82Q8N4S0 544 aa11.97□□□□□ -0.49
PAX3-210ENST00000555548 TMUB1Q9BVT8 246 aa11.96□□□□□ -0.49
PAX3-210ENST00000555548 REPIN1Q9BWE0 567 aaKnown RBP11.96□□□□□ -0.49
PAX3-210ENST00000555548 NPM2Q86SE8 214 aaKnown RBP11.95□□□□□ -0.5
PAX3-210ENST00000555548 TBC1D12O60347 775 aa11.93□□□□□ -0.5
PAX3-210ENST00000555548 ZBTB7CA1YPR0 619 aa11.92□□□□□ -0.5
PAX3-210ENST00000555548 G3V3G9 751 aa11.92□□□□□ -0.5
PAX3-210ENST00000555548 CLCN1P35523 988 aa11.92□□□□□ -0.5
PAX3-210ENST00000555548 IRX5P78411 483 aaPredicted RBP11.92□□□□□ -0.5
PAX3-210ENST00000555548 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
PAX3-210ENST00000555548 EVI5O60447 810 aa11.91□□□□□ -0.5
PAX3-210ENST00000555548 SKIV2LQ15477 1246 aaKnown RBP11.9□□□□□ -0.5
PAX3-210ENST00000555548 PROSER2Q86WR7 435 aaPredicted RBP11.89□□□□□ -0.51
PAX3-210ENST00000555548 IER5LQ5T953 404 aa11.88□□□□□ -0.51
PAX3-210ENST00000555548 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
PAX3-210ENST00000555548 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
PAX3-210ENST00000555548 TMEM92Q6UXU6 159 aa11.86□□□□□ -0.51
PAX3-210ENST00000555548 FNBP4Q8N3X1 1017 aaPredicted RBP11.86□□□□□ -0.51
PAX3-210ENST00000555548 NPDC1Q9NQX5 325 aaPredicted RBP11.86□□□□□ -0.51
PAX3-210ENST00000555548 MDM2Q00987 491 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms