RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CDC42BPBQ9Y5S2 1711 aa19.1■□□□□ 0.65
SRP54-206ENST00000555317 TIAM1Q13009 1591 aa19.1■□□□□ 0.65
SRP54-206ENST00000555317 CDC42BPAQ5VT25 1732 aa19.09■□□□□ 0.65
SRP54-206ENST00000555317 RICTORQ6R327 1708 aa19.08■□□□□ 0.65
SRP54-206ENST00000555317 FRMPD1Q5SYB0 1578 aa19.08■□□□□ 0.65
SRP54-206ENST00000555317 SCAPERQ9BY12 1400 aa19.08■□□□□ 0.64
SRP54-206ENST00000555317 CCNB3Q8WWL7 1395 aa19.07■□□□□ 0.64
SRP54-206ENST00000555317 APLP2Q06481 763 aa19.07■□□□□ 0.64
SRP54-206ENST00000555317 SUPT6HQ7KZ85 1726 aaKnown RBP19.05■□□□□ 0.64
SRP54-206ENST00000555317 POGZQ7Z3K3 1410 aa19.05■□□□□ 0.64
SRP54-206ENST00000555317 ITSN2Q9NZM3 1697 aa19.03■□□□□ 0.64
SRP54-206ENST00000555317 MAP3K1Q13233 1512 aa19.02■□□□□ 0.64
SRP54-206ENST00000555317 ZMYM4Q5VZL5 1548 aa19.02■□□□□ 0.64
SRP54-206ENST00000555317 GPATCH8Q9UKJ3 1502 aaKnown RBP19.02■□□□□ 0.64
SRP54-206ENST00000555317 ZNF777Q9ULD5 760 aaPredicted RBP19.02■□□□□ 0.64
SRP54-206ENST00000555317 ZNF518AQ6AHZ1 1483 aa19.02■□□□□ 0.63
SRP54-206ENST00000555317 ARHGEF40Q8TER5 1519 aa19.01■□□□□ 0.63
SRP54-206ENST00000555317 CFDP1Q9UEE9 299 aaPredicted RBP19.01■□□□□ 0.63
SRP54-206ENST00000555317 LRRC9Q6ZRR7 1453 aa19■□□□□ 0.63
SRP54-206ENST00000555317 ABCC1P33527 1531 aa19■□□□□ 0.63
SRP54-206ENST00000555317 ZFYVE16Q7Z3T8 1539 aa19■□□□□ 0.63
SRP54-206ENST00000555317 MAGI2Q86UL8 1455 aa18.99■□□□□ 0.63
SRP54-206ENST00000555317 MYT1LQ9UL68 1186 aa18.99■□□□□ 0.63
SRP54-206ENST00000555317 NCOA2Q15596 1464 aa18.98■□□□□ 0.63
SRP54-206ENST00000555317 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
SRP54-206ENST00000555317 SAMD9LQ8IVG5 1584 aa18.96■□□□□ 0.63
SRP54-206ENST00000555317 ARID4BQ4LE39 1312 aaPredicted RBP18.96■□□□□ 0.63
SRP54-206ENST00000555317 KDM5CP41229 1560 aa18.94■□□□□ 0.62
SRP54-206ENST00000555317 AFAP1Q8N556 730 aa18.94■□□□□ 0.62
SRP54-206ENST00000555317 SYCP2Q9BX26 1530 aa18.94■□□□□ 0.62
SRP54-206ENST00000555317 HECW2Q9P2P5 1572 aa18.93■□□□□ 0.62
SRP54-206ENST00000555317 KDM4FA0A1W2PPD8 638 aa18.93■□□□□ 0.62
SRP54-206ENST00000555317 YEATS2Q9ULM3 1422 aa18.92■□□□□ 0.62
SRP54-206ENST00000555317 TRAPPC8Q9Y2L5 1435 aa18.91■□□□□ 0.62
SRP54-206ENST00000555317 ARHGEF12Q9NZN5 1544 aa18.91■□□□□ 0.62
SRP54-206ENST00000555317 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
SRP54-206ENST00000555317 KIAA1107Q9UPP5 1409 aa18.91■□□□□ 0.62
SRP54-206ENST00000555317 HNRNPMP52272 730 aaKnown RBP eCLIP18.88■□□□□ 0.61
SRP54-206ENST00000555317 ATP10AO60312 1499 aa18.88■□□□□ 0.61
SRP54-206ENST00000555317 C9orf84Q5VXU9 1444 aa18.87■□□□□ 0.61
SRP54-206ENST00000555317 MLH3Q9UHC1 1453 aa18.87■□□□□ 0.61
SRP54-206ENST00000555317 SPAG9O60271 1321 aaKnown RBP18.86■□□□□ 0.61
SRP54-206ENST00000555317 CAMSAP2Q08AD1 1489 aa18.85■□□□□ 0.61
SRP54-206ENST00000555317 ZNF644Q9H582 1327 aaPredicted RBP18.85■□□□□ 0.61
SRP54-206ENST00000555317 BCORL1Q5H9F3 1711 aa18.85■□□□□ 0.61
SRP54-206ENST00000555317 DIP2CQ9Y2E4 1556 aa18.84■□□□□ 0.61
SRP54-206ENST00000555317 MYOM3Q5VTT5 1437 aa18.83■□□□□ 0.61
SRP54-206ENST00000555317 ABCA6Q8N139 1617 aa18.83■□□□□ 0.61
SRP54-206ENST00000555317 KIDINS220Q9ULH0 1771 aa18.82■□□□□ 0.6
SRP54-206ENST00000555317 ATP7AQ04656 1500 aa18.81■□□□□ 0.6
SRP54-206ENST00000555317 ADAMTSL3P82987 1691 aa18.8■□□□□ 0.6
SRP54-206ENST00000555317 MIA2Q96PC5 1412 aa18.8■□□□□ 0.6
SRP54-206ENST00000555317 CCDC141Q6ZP82 1450 aa18.79■□□□□ 0.6
SRP54-206ENST00000555317 MLECQ14165 292 aa18.79■□□□□ 0.6
SRP54-206ENST00000555317 INO80Q9ULG1 1556 aaPredicted RBP18.79■□□□□ 0.6
SRP54-206ENST00000555317 MBD5Q9P267 1494 aa18.78■□□□□ 0.6
SRP54-206ENST00000555317 SIGLEC1Q9BZZ2 1709 aa18.78■□□□□ 0.6
SRP54-206ENST00000555317 REREQ9P2R6 1566 aa18.78■□□□□ 0.6
SRP54-206ENST00000555317 RSPH4AQ5TD94 716 aa18.78■□□□□ 0.6
SRP54-206ENST00000555317 MADDQ8WXG6 1647 aa18.78■□□□□ 0.6
SRP54-206ENST00000555317 ARHGEF5Q12774 1597 aa18.76■□□□□ 0.59
SRP54-206ENST00000555317 RIMS1Q86UR5 1692 aaKnown RBP18.75■□□□□ 0.59
SRP54-206ENST00000555317 FER1L4A9Z1Z3 1794 aa18.75■□□□□ 0.59
SRP54-206ENST00000555317 TSPY4P0CV99 314 aa18.74■□□□□ 0.59
SRP54-206ENST00000555317 TSPY10P0CW01 314 aa18.74■□□□□ 0.59
SRP54-206ENST00000555317 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
SRP54-206ENST00000555317 ADGBQ8N7X0 1667 aa18.73■□□□□ 0.59
SRP54-206ENST00000555317 RTEL1-TNFRSF6BF6WH68 1400 aa18.73■□□□□ 0.59
SRP54-206ENST00000555317 PTPRMP28827 1452 aa18.72■□□□□ 0.59
SRP54-206ENST00000555317 AGLP35573 1532 aa18.72■□□□□ 0.59
SRP54-206ENST00000555317 FGD6Q6ZV73 1430 aa18.72■□□□□ 0.59
SRP54-206ENST00000555317 ESF1Q9H501 851 aaKnown RBP18.71■□□□□ 0.59
SRP54-206ENST00000555317 A2MP01023 1474 aa18.71■□□□□ 0.59
SRP54-206ENST00000555317 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
SRP54-206ENST00000555317 PLXNC1O60486 1568 aa18.67■□□□□ 0.58
SRP54-206ENST00000555317 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
SRP54-206ENST00000555317 MAST1Q9Y2H9 1570 aa18.65■□□□□ 0.58
SRP54-206ENST00000555317 CROCC2H7BZ55 1655 aa18.64■□□□□ 0.57
SRP54-206ENST00000555317 FAM50AQ14320 339 aaKnown RBP18.63■□□□□ 0.57
SRP54-206ENST00000555317 PPARGC1BQ86YN6 1023 aaKnown RBP18.63■□□□□ 0.57
SRP54-206ENST00000555317 DHX29Q7Z478 1369 aaKnown RBP18.62■□□□□ 0.57
SRP54-206ENST00000555317 SHANK2Q9UPX8 1470 aa18.62■□□□□ 0.57
SRP54-206ENST00000555317 DNMT1P26358 1616 aaKnown RBP18.62■□□□□ 0.57
SRP54-206ENST00000555317 DAPK1P53355 1430 aa18.6■□□□□ 0.57
SRP54-206ENST00000555317 CNTLNQ9NXG0 1405 aa18.6■□□□□ 0.57
SRP54-206ENST00000555317 GGT6Q6P531 493 aa18.6■□□□□ 0.57
SRP54-206ENST00000555317 ABCC5O15440 1437 aa18.59■□□□□ 0.57
SRP54-206ENST00000555317 KIF3BO15066 747 aa18.57■□□□□ 0.56
SRP54-206ENST00000555317 KIF15Q9NS87 1388 aa18.55■□□□□ 0.56
SRP54-206ENST00000555317 DUOX2Q9NRD8 1548 aa18.54■□□□□ 0.56
SRP54-206ENST00000555317 MROH2AA6NES4 1674 aa18.54■□□□□ 0.56
SRP54-206ENST00000555317 CLTCQ00610 1675 aaKnown RBP18.54■□□□□ 0.56
SRP54-206ENST00000555317 PPP6R1Q9UPN7 881 aa18.54■□□□□ 0.56
SRP54-206ENST00000555317 ANKRD30AQ9BXX3 1397 aa18.54■□□□□ 0.56
SRP54-206ENST00000555317 C3P01024 1663 aa18.54■□□□□ 0.56
SRP54-206ENST00000555317 CEBPAP49715 358 aaPredicted RBP18.53■□□□□ 0.56
SRP54-206ENST00000555317 CHIC2Q9UKJ5 165 aa18.53■□□□□ 0.56
SRP54-206ENST00000555317 EIF2AK4Q9P2K8 1649 aaKnown RBP18.52■□□□□ 0.56
SRP54-206ENST00000555317 RRP7BPQ9NSQ0 103 aa18.52■□□□□ 0.56
SRP54-206ENST00000555317 SETD1BQ9UPS6 1966 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms