RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 NEO1Q92859 1461 aa26.98■■□□□ 1.91
PSEN1-212ENST00000555254 EFCAB2Q5VUJ9 269 aa26.97■■□□□ 1.91
PSEN1-212ENST00000555254 RAPGEF3O95398 923 aa26.96■■□□□ 1.91
PSEN1-212ENST00000555254 AKNAQ7Z591 1439 aa26.95■■□□□ 1.9
PSEN1-212ENST00000555254 LRRC9Q6ZRR7 1453 aa26.93■■□□□ 1.9
PSEN1-212ENST00000555254 ARAP3Q8WWN8 1544 aa26.93■■□□□ 1.9
PSEN1-212ENST00000555254 LMTK3Q96Q04 1460 aa26.92■■□□□ 1.9
PSEN1-212ENST00000555254 ARHGAP5Q13017 1502 aa26.89■■□□□ 1.89
PSEN1-212ENST00000555254 ZNF777Q9ULD5 760 aaPredicted RBP26.86■■□□□ 1.89
PSEN1-212ENST00000555254 CCNB3Q8WWL7 1395 aa26.85■■□□□ 1.89
PSEN1-212ENST00000555254 MYO5CQ9NQX4 1742 aa26.85■■□□□ 1.89
PSEN1-212ENST00000555254 DENND4BO75064 1496 aaPredicted RBP26.85■■□□□ 1.89
PSEN1-212ENST00000555254 CFAP74Q9C0B2 1584 aa26.84■■□□□ 1.89
PSEN1-212ENST00000555254 SCAPERQ9BY12 1400 aa26.84■■□□□ 1.89
PSEN1-212ENST00000555254 EHBP1L1Q8N3D4 1523 aa26.83■■□□□ 1.89
PSEN1-212ENST00000555254 CFDP1Q9UEE9 299 aaPredicted RBP26.81■■□□□ 1.88
PSEN1-212ENST00000555254 GPATCH8Q9UKJ3 1502 aaKnown RBP26.8■■□□□ 1.88
PSEN1-212ENST00000555254 AFAP1Q8N556 730 aa26.74■■□□□ 1.87
PSEN1-212ENST00000555254 MYT1LQ9UL68 1186 aa26.74■■□□□ 1.87
PSEN1-212ENST00000555254 PREX2Q70Z35 1606 aa26.74■■□□□ 1.87
PSEN1-212ENST00000555254 CDC42BPBQ9Y5S2 1711 aa26.73■■□□□ 1.87
PSEN1-212ENST00000555254 NCOA2Q15596 1464 aa26.73■■□□□ 1.87
PSEN1-212ENST00000555254 FRMPD1Q5SYB0 1578 aa26.71■■□□□ 1.87
PSEN1-212ENST00000555254 ILDR2Q71H61 639 aa26.71■■□□□ 1.87
PSEN1-212ENST00000555254 POGZQ7Z3K3 1410 aa26.71■■□□□ 1.87
PSEN1-212ENST00000555254 CDC42BPAQ5VT25 1732 aa26.7■■□□□ 1.87
PSEN1-212ENST00000555254 HNRNPMP52272 730 aaKnown RBP eCLIP26.7■■□□□ 1.86
PSEN1-212ENST00000555254 ZNF644Q9H582 1327 aaPredicted RBP26.68■■□□□ 1.86
PSEN1-212ENST00000555254 SOCS7O14512 581 aa26.68■■□□□ 1.86
PSEN1-212ENST00000555254 SUPT6HQ7KZ85 1726 aaKnown RBP26.67■■□□□ 1.86
PSEN1-212ENST00000555254 RICTORQ6R327 1708 aa26.65■■□□□ 1.86
PSEN1-212ENST00000555254 ARHGEF12Q9NZN5 1544 aa26.65■■□□□ 1.86
PSEN1-212ENST00000555254 TRAPPC8Q9Y2L5 1435 aa26.65■■□□□ 1.86
PSEN1-212ENST00000555254 ARID4BQ4LE39 1312 aaPredicted RBP26.65■■□□□ 1.86
PSEN1-212ENST00000555254 ZNF518AQ6AHZ1 1483 aa26.63■■□□□ 1.85
PSEN1-212ENST00000555254 ABCC1P33527 1531 aa26.62■■□□□ 1.85
PSEN1-212ENST00000555254 RRBP1Q9P2E9 1410 aaKnown RBP26.62■■□□□ 1.85
PSEN1-212ENST00000555254 YEATS2Q9ULM3 1422 aa26.62■■□□□ 1.85
PSEN1-212ENST00000555254 SAMD9LQ8IVG5 1584 aa26.61■■□□□ 1.85
PSEN1-212ENST00000555254 ZMYM4Q5VZL5 1548 aa26.6■■□□□ 1.85
PSEN1-212ENST00000555254 MAGI2Q86UL8 1455 aa26.59■■□□□ 1.85
PSEN1-212ENST00000555254 ZFYVE16Q7Z3T8 1539 aa26.59■■□□□ 1.85
PSEN1-212ENST00000555254 PLEKHH2Q8IVE3 1493 aa26.58■■□□□ 1.85
PSEN1-212ENST00000555254 SYCP2Q9BX26 1530 aa26.58■■□□□ 1.85
PSEN1-212ENST00000555254 KIAA1107Q9UPP5 1409 aa26.57■■□□□ 1.84
PSEN1-212ENST00000555254 FAM50AQ14320 339 aaKnown RBP26.57■■□□□ 1.84
PSEN1-212ENST00000555254 ITSN2Q9NZM3 1697 aa26.57■■□□□ 1.84
PSEN1-212ENST00000555254 MYOM3Q5VTT5 1437 aa26.56■■□□□ 1.84
PSEN1-212ENST00000555254 SPAG9O60271 1321 aaKnown RBP26.55■■□□□ 1.84
PSEN1-212ENST00000555254 ARHGEF40Q8TER5 1519 aa26.53■■□□□ 1.84
PSEN1-212ENST00000555254 FGD6Q6ZV73 1430 aa26.52■■□□□ 1.84
PSEN1-212ENST00000555254 KDM5CP41229 1560 aa26.51■■□□□ 1.83
PSEN1-212ENST00000555254 ATP10AO60312 1499 aa26.5■■□□□ 1.83
PSEN1-212ENST00000555254 CAMSAP2Q08AD1 1489 aa26.49■■□□□ 1.83
PSEN1-212ENST00000555254 DISP3Q9P2K9 1392 aa26.49■■□□□ 1.83
PSEN1-212ENST00000555254 MLH3Q9UHC1 1453 aa26.49■■□□□ 1.83
PSEN1-212ENST00000555254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.48■■□□□ 1.83
PSEN1-212ENST00000555254 MLECQ14165 292 aa26.48■■□□□ 1.83
PSEN1-212ENST00000555254 MIA2Q96PC5 1412 aa26.47■■□□□ 1.83
PSEN1-212ENST00000555254 MBD5Q9P267 1494 aa26.46■■□□□ 1.83
PSEN1-212ENST00000555254 ITGAEP38570 1179 aa26.45■■□□□ 1.82
PSEN1-212ENST00000555254 RSPH4AQ5TD94 716 aa26.44■■□□□ 1.82
PSEN1-212ENST00000555254 C9orf84Q5VXU9 1444 aa26.44■■□□□ 1.82
PSEN1-212ENST00000555254 TSPY4P0CV99 314 aa26.41■■□□□ 1.82
PSEN1-212ENST00000555254 TSPY10P0CW01 314 aa26.41■■□□□ 1.82
PSEN1-212ENST00000555254 PTPRMP28827 1452 aa26.4■■□□□ 1.82
PSEN1-212ENST00000555254 DIP2CQ9Y2E4 1556 aa26.39■■□□□ 1.82
PSEN1-212ENST00000555254 CCDC141Q6ZP82 1450 aa26.38■■□□□ 1.81
PSEN1-212ENST00000555254 ABCA6Q8N139 1617 aa26.37■■□□□ 1.81
PSEN1-212ENST00000555254 ADAMTSL3P82987 1691 aa26.37■■□□□ 1.81
PSEN1-212ENST00000555254 KIDINS220Q9ULH0 1771 aa26.36■■□□□ 1.81
PSEN1-212ENST00000555254 ATP7AQ04656 1500 aa26.36■■□□□ 1.81
PSEN1-212ENST00000555254 PTPN23Q9H3S7 1636 aa26.36■■□□□ 1.81
PSEN1-212ENST00000555254 TCOF1Q13428 1488 aaKnown RBP26.35■■□□□ 1.81
PSEN1-212ENST00000555254 SIGLEC1Q9BZZ2 1709 aa26.33■■□□□ 1.81
PSEN1-212ENST00000555254 PLPPR3Q6T4P5 718 aa26.32■■□□□ 1.8
PSEN1-212ENST00000555254 RTEL1-TNFRSF6BF6WH68 1400 aa26.31■■□□□ 1.8
PSEN1-212ENST00000555254 BCORL1Q5H9F3 1711 aa26.31■■□□□ 1.8
PSEN1-212ENST00000555254 ARHGEF5Q12774 1597 aa26.3■■□□□ 1.8
PSEN1-212ENST00000555254 INO80Q9ULG1 1556 aaPredicted RBP26.3■■□□□ 1.8
PSEN1-212ENST00000555254 A2MP01023 1474 aa26.28■■□□□ 1.8
PSEN1-212ENST00000555254 CERKQ8TCT0 537 aa26.27■■□□□ 1.8
PSEN1-212ENST00000555254 REREQ9P2R6 1566 aa26.25■■□□□ 1.79
PSEN1-212ENST00000555254 ESF1Q9H501 851 aaKnown RBP26.25■■□□□ 1.79
PSEN1-212ENST00000555254 MADDQ8WXG6 1647 aa26.25■■□□□ 1.79
PSEN1-212ENST00000555254 CHIC2Q9UKJ5 165 aa26.24■■□□□ 1.79
PSEN1-212ENST00000555254 ABCC5O15440 1437 aa26.23■■□□□ 1.79
PSEN1-212ENST00000555254 DHX29Q7Z478 1369 aaKnown RBP26.22■■□□□ 1.79
PSEN1-212ENST00000555254 SPATA31D1Q6ZQQ2 1576 aa26.22■■□□□ 1.79
PSEN1-212ENST00000555254 GGT6Q6P531 493 aa26.22■■□□□ 1.79
PSEN1-212ENST00000555254 AGLP35573 1532 aa26.22■■□□□ 1.79
PSEN1-212ENST00000555254 DAPK1P53355 1430 aa26.2■■□□□ 1.78
PSEN1-212ENST00000555254 KIF3BO15066 747 aa26.19■■□□□ 1.78
PSEN1-212ENST00000555254 RRP7BPQ9NSQ0 103 aa26.19■■□□□ 1.78
PSEN1-212ENST00000555254 RIMS1Q86UR5 1692 aaKnown RBP26.16■■□□□ 1.78
PSEN1-212ENST00000555254 CEBPAP49715 358 aaPredicted RBP26.16■■□□□ 1.78
PSEN1-212ENST00000555254 HSPA2P54652 639 aa26.16■■□□□ 1.78
PSEN1-212ENST00000555254 ADGBQ8N7X0 1667 aa26.15■■□□□ 1.78
PSEN1-212ENST00000555254 SETD5Q9C0A6 1442 aa26.14■■□□□ 1.78
PSEN1-212ENST00000555254 CCER1Q8TC90 406 aaPredicted RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms