RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 ILDR1Q86SU0 546 aaPredicted RBP25.84■■□□□ 1.73
ARHGEF40-205ENST00000555052 LRRIQ1Q96JM4 1722 aa25.84■■□□□ 1.73
ARHGEF40-205ENST00000555052 SCAPERQ9BY12 1400 aa25.84■■□□□ 1.73
ARHGEF40-205ENST00000555052 CDK11AQ9UQ88 783 aaPredicted RBP25.84■■□□□ 1.73
ARHGEF40-205ENST00000555052 SIGLEC1Q9BZZ2 1709 aa25.83■■□□□ 1.73
ARHGEF40-205ENST00000555052 RIMS1Q86UR5 1692 aaKnown RBP25.78■■□□□ 1.72
ARHGEF40-205ENST00000555052 EFCAB2Q5VUJ9 269 aa25.78■■□□□ 1.72
ARHGEF40-205ENST00000555052 CLIP1P30622 1438 aa25.76■■□□□ 1.71
ARHGEF40-205ENST00000555052 CASKIN1Q8WXD9 1431 aa25.76■■□□□ 1.71
ARHGEF40-205ENST00000555052 PCF11O94913 1555 aaKnown RBP25.76■■□□□ 1.71
ARHGEF40-205ENST00000555052 LMTK3Q96Q04 1460 aa25.73■■□□□ 1.71
ARHGEF40-205ENST00000555052 ARHGAP5Q13017 1502 aa25.72■■□□□ 1.71
ARHGEF40-205ENST00000555052 CCDC18Q5T9S5 1454 aa25.72■■□□□ 1.71
ARHGEF40-205ENST00000555052 KDM5CP41229 1560 aa25.7■■□□□ 1.71
ARHGEF40-205ENST00000555052 ATP10AO60312 1499 aa25.7■■□□□ 1.7
ARHGEF40-205ENST00000555052 ZNF518AQ6AHZ1 1483 aa25.7■■□□□ 1.7
ARHGEF40-205ENST00000555052 C9orf84Q5VXU9 1444 aa25.69■■□□□ 1.7
ARHGEF40-205ENST00000555052 CDC42BPBQ9Y5S2 1711 aa25.68■■□□□ 1.7
ARHGEF40-205ENST00000555052 FYCO1Q9BQS8 1478 aa25.66■■□□□ 1.7
ARHGEF40-205ENST00000555052 FER1L4A9Z1Z3 1794 aa25.66■■□□□ 1.7
ARHGEF40-205ENST00000555052 ARHGEF12Q9NZN5 1544 aa25.65■■□□□ 1.7
ARHGEF40-205ENST00000555052 PREX2Q70Z35 1606 aa25.65■■□□□ 1.7
ARHGEF40-205ENST00000555052 MLECQ14165 292 aa25.62■■□□□ 1.69
ARHGEF40-205ENST00000555052 AFAP1Q8N556 730 aa25.62■■□□□ 1.69
ARHGEF40-205ENST00000555052 ABCC1P33527 1531 aa25.61■■□□□ 1.69
ARHGEF40-205ENST00000555052 DIP2CQ9Y2E4 1556 aa25.6■■□□□ 1.69
ARHGEF40-205ENST00000555052 MLH3Q9UHC1 1453 aa25.58■■□□□ 1.69
ARHGEF40-205ENST00000555052 REREQ9P2R6 1566 aa25.57■■□□□ 1.68
ARHGEF40-205ENST00000555052 CDC42BPAQ5VT25 1732 aa25.57■■□□□ 1.68
ARHGEF40-205ENST00000555052 TRAPPC8Q9Y2L5 1435 aa25.56■■□□□ 1.68
ARHGEF40-205ENST00000555052 ABCA6Q8N139 1617 aa25.55■■□□□ 1.68
ARHGEF40-205ENST00000555052 ITSN2Q9NZM3 1697 aa25.55■■□□□ 1.68
ARHGEF40-205ENST00000555052 PLPPR3Q6T4P5 718 aa25.54■■□□□ 1.68
ARHGEF40-205ENST00000555052 HSPA2P54652 639 aa25.52■■□□□ 1.68
ARHGEF40-205ENST00000555052 AGLP35573 1532 aa25.48■■□□□ 1.67
ARHGEF40-205ENST00000555052 KIDINS220Q9ULH0 1771 aa25.48■■□□□ 1.67
ARHGEF40-205ENST00000555052 GPATCH8Q9UKJ3 1502 aaKnown RBP25.47■■□□□ 1.67
ARHGEF40-205ENST00000555052 FBXO41Q8TF61 875 aa25.46■■□□□ 1.67
ARHGEF40-205ENST00000555052 SAMD9LQ8IVG5 1584 aa25.46■■□□□ 1.67
ARHGEF40-205ENST00000555052 MYT1LQ9UL68 1186 aa25.45■■□□□ 1.66
ARHGEF40-205ENST00000555052 PREX1Q8TCU6 1659 aa25.45■■□□□ 1.66
ARHGEF40-205ENST00000555052 CEBPAP49715 358 aaPredicted RBP25.43■■□□□ 1.66
ARHGEF40-205ENST00000555052 SYCP2Q9BX26 1530 aa25.42■■□□□ 1.66
ARHGEF40-205ENST00000555052 SETD1BQ9UPS6 1966 aaKnown RBP25.41■■□□□ 1.66
ARHGEF40-205ENST00000555052 ZNF777Q9ULD5 760 aaPredicted RBP25.38■■□□□ 1.65
ARHGEF40-205ENST00000555052 KIAA1107Q9UPP5 1409 aa25.37■■□□□ 1.65
ARHGEF40-205ENST00000555052 C3P01024 1663 aa25.36■■□□□ 1.65
ARHGEF40-205ENST00000555052 PLEKHH2Q8IVE3 1493 aa25.35■■□□□ 1.65
ARHGEF40-205ENST00000555052 MTUS2Q5JR59 1369 aa25.35■■□□□ 1.65
ARHGEF40-205ENST00000555052 CCNB3Q8WWL7 1395 aa25.35■■□□□ 1.65
ARHGEF40-205ENST00000555052 HNRNPMP52272 730 aaKnown RBP eCLIP25.33■■□□□ 1.65
ARHGEF40-205ENST00000555052 CEP162Q5TB80 1403 aa25.33■■□□□ 1.65
ARHGEF40-205ENST00000555052 UHRF1BP1Q6BDS2 1440 aa25.33■■□□□ 1.65
ARHGEF40-205ENST00000555052 CFDP1Q9UEE9 299 aaPredicted RBP25.33■■□□□ 1.65
ARHGEF40-205ENST00000555052 SPAG9O60271 1321 aaKnown RBP25.33■■□□□ 1.64
ARHGEF40-205ENST00000555052 INO80Q9ULG1 1556 aaPredicted RBP25.32■■□□□ 1.64
ARHGEF40-205ENST00000555052 ATP7AQ04656 1500 aa25.32■■□□□ 1.64
ARHGEF40-205ENST00000555052 EHBP1L1Q8N3D4 1523 aa25.32■■□□□ 1.64
ARHGEF40-205ENST00000555052 TIAM1Q13009 1591 aa25.31■■□□□ 1.64
ARHGEF40-205ENST00000555052 CNTLNQ9NXG0 1405 aa25.3■■□□□ 1.64
ARHGEF40-205ENST00000555052 STRCQ7RTU9 1775 aa25.29■■□□□ 1.64
ARHGEF40-205ENST00000555052 PLXNC1O60486 1568 aa25.29■■□□□ 1.64
ARHGEF40-205ENST00000555052 ESF1Q9H501 851 aaKnown RBP25.26■■□□□ 1.63
ARHGEF40-205ENST00000555052 MROH2AA6NES4 1674 aa25.25■■□□□ 1.63
ARHGEF40-205ENST00000555052 SUPT6HQ7KZ85 1726 aaKnown RBP25.24■■□□□ 1.63
ARHGEF40-205ENST00000555052 A2MP01023 1474 aa25.23■■□□□ 1.63
ARHGEF40-205ENST00000555052 MBD5Q9P267 1494 aa25.23■■□□□ 1.63
ARHGEF40-205ENST00000555052 ZNF644Q9H582 1327 aaPredicted RBP25.22■■□□□ 1.63
ARHGEF40-205ENST00000555052 CERKQ8TCT0 537 aa25.21■■□□□ 1.63
ARHGEF40-205ENST00000555052 NPATQ14207 1427 aa25.2■■□□□ 1.63
ARHGEF40-205ENST00000555052 DMRT2Q9Y5R5 561 aa25.18■■□□□ 1.62
ARHGEF40-205ENST00000555052 ADGBQ8N7X0 1667 aa25.17■■□□□ 1.62
ARHGEF40-205ENST00000555052 ZMYM3Q14202 1370 aa25.17■■□□□ 1.62
ARHGEF40-205ENST00000555052 NCOA2Q15596 1464 aa25.15■■□□□ 1.62
ARHGEF40-205ENST00000555052 CLTCQ00610 1675 aaKnown RBP25.14■■□□□ 1.62
ARHGEF40-205ENST00000555052 RTEL1-TNFRSF6BF6WH68 1400 aa25.14■■□□□ 1.62
ARHGEF40-205ENST00000555052 PTPRTO14522 1441 aa25.14■■□□□ 1.62
ARHGEF40-205ENST00000555052 NCOA1Q15788 1441 aa25.13■■□□□ 1.61
ARHGEF40-205ENST00000555052 CAMSAP2Q08AD1 1489 aa25.09■■□□□ 1.61
ARHGEF40-205ENST00000555052 CCDC141Q6ZP82 1450 aa25.09■■□□□ 1.61
ARHGEF40-205ENST00000555052 PTPRKQ15262 1439 aa25.09■■□□□ 1.61
ARHGEF40-205ENST00000555052 PPP6R1Q9UPN7 881 aa25.08■■□□□ 1.61
ARHGEF40-205ENST00000555052 VPS8Q8N3P4 1428 aa25.07■■□□□ 1.6
ARHGEF40-205ENST00000555052 GGT6Q6P531 493 aa25.07■■□□□ 1.6
ARHGEF40-205ENST00000555052 ZNF142P52746 1687 aaPredicted RBP25.07■■□□□ 1.6
ARHGEF40-205ENST00000555052 DHX29Q7Z478 1369 aaKnown RBP25.06■■□□□ 1.6
ARHGEF40-205ENST00000555052 CAMSAP1Q5T5Y3 1602 aa25.06■■□□□ 1.6
ARHGEF40-205ENST00000555052 MYO3AQ8NEV4 1616 aa25.06■■□□□ 1.6
ARHGEF40-205ENST00000555052 LRRC9Q6ZRR7 1453 aa25.02■■□□□ 1.6
ARHGEF40-205ENST00000555052 ARHGEF5Q12774 1597 aa25.02■■□□□ 1.6
ARHGEF40-205ENST00000555052 LOC105371045A0A1W2PR82 267 aa25.02■■□□□ 1.6
ARHGEF40-205ENST00000555052 CEP170BQ9Y4F5 1589 aaPredicted RBP25.01■■□□□ 1.59
ARHGEF40-205ENST00000555052 LTBP4Q8N2S1 1624 aa25.01■■□□□ 1.59
ARHGEF40-205ENST00000555052 RSPH4AQ5TD94 716 aa25.01■■□□□ 1.59
ARHGEF40-205ENST00000555052 PLA2R1Q13018 1463 aa24.99■■□□□ 1.59
ARHGEF40-205ENST00000555052 FAM135AQ9P2D6 1515 aa24.98■■□□□ 1.59
ARHGEF40-205ENST00000555052 MAP3K1Q13233 1512 aa24.97■■□□□ 1.59
ARHGEF40-205ENST00000555052 TCOF1Q13428 1488 aaKnown RBP24.96■■□□□ 1.59
ARHGEF40-205ENST00000555052 KIF3BO15066 747 aa24.94■■□□□ 1.58
ARHGEF40-205ENST00000555052 KDM5DQ9BY66 1539 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 647 ms