RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 SLC24A3Q9HC58 644 aa10.89□□□□□ -0.67
FCF1-207ENST00000554973 ARHGEF1Q92888 912 aaKnown RBP10.88□□□□□ -0.67
FCF1-207ENST00000554973 COLQQ9Y215 455 aaPredicted RBP10.88□□□□□ -0.67
FCF1-207ENST00000554973 PLCG2P16885 1265 aa10.86□□□□□ -0.67
FCF1-207ENST00000554973 UBTFP17480 764 aaKnown RBP10.84□□□□□ -0.67
FCF1-207ENST00000554973 GOLGA2Q08379 1002 aa10.82□□□□□ -0.68
FCF1-207ENST00000554973 TESPA1A2RU30 521 aaPredicted RBP10.81□□□□□ -0.68
FCF1-207ENST00000554973 ZMYND15Q9H091 742 aa10.81□□□□□ -0.68
FCF1-207ENST00000554973 ZMYND10O75800 440 aa10.79□□□□□ -0.68
FCF1-207ENST00000554973 PSEN1P49768 467 aa10.79□□□□□ -0.68
FCF1-207ENST00000554973 IRX5P78411 483 aaPredicted RBP10.79□□□□□ -0.68
FCF1-207ENST00000554973 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
FCF1-207ENST00000554973 TRIM26Q12899 539 aaPredicted RBP10.77□□□□□ -0.69
FCF1-207ENST00000554973 MKRN3Q13064 507 aaKnown RBP10.77□□□□□ -0.69
FCF1-207ENST00000554973 RSPH6AQ9H0K4 717 aa10.77□□□□□ -0.69
FCF1-207ENST00000554973 PDAP1Q13442 181 aaKnown RBP10.76□□□□□ -0.69
FCF1-207ENST00000554973 E2F4Q16254 413 aa10.76□□□□□ -0.69
FCF1-207ENST00000554973 SEMA3EO15041 775 aa10.75□□□□□ -0.69
FCF1-207ENST00000554973 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
FCF1-207ENST00000554973 BARGINQ6ZT62 677 aa10.71□□□□□ -0.69
FCF1-207ENST00000554973 POTEMA6NI47 508 aa10.7□□□□□ -0.7
FCF1-207ENST00000554973 SLAIN1Q8ND83 568 aa10.7□□□□□ -0.7
FCF1-207ENST00000554973 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
FCF1-207ENST00000554973 HRCP23327 699 aa10.68□□□□□ -0.7
FCF1-207ENST00000554973 POTEGQ6S5H5 508 aa10.67□□□□□ -0.7
FCF1-207ENST00000554973 NPM2Q86SE8 214 aaKnown RBP10.67□□□□□ -0.7
FCF1-207ENST00000554973 AK7Q96M32 723 aa10.67□□□□□ -0.7
FCF1-207ENST00000554973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.67□□□□□ -0.7
FCF1-207ENST00000554973 CABP2Q9NPB3 220 aa10.66□□□□□ -0.7
FCF1-207ENST00000554973 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.66□□□□□ -0.7
FCF1-207ENST00000554973 L3MBTL3Q96JM7 780 aaPredicted RBP10.65□□□□□ -0.7
FCF1-207ENST00000554973 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
FCF1-207ENST00000554973 MFRPQ9BY79 579 aa10.63□□□□□ -0.71
FCF1-207ENST00000554973 IL27Q8NEV9 243 aa10.62□□□□□ -0.71
FCF1-207ENST00000554973 C3orf67Q6ZVT6 689 aa10.61□□□□□ -0.71
FCF1-207ENST00000554973 GPBP1L1Q9HC44 474 aaPredicted RBP10.61□□□□□ -0.71
FCF1-207ENST00000554973 ARIH1Q9Y4X5 557 aaPredicted RBP10.59□□□□□ -0.71
FCF1-207ENST00000554973 G3V3G9 751 aa10.58□□□□□ -0.72
FCF1-207ENST00000554973 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
FCF1-207ENST00000554973 KDM4CQ9H3R0 1056 aa10.57□□□□□ -0.72
FCF1-207ENST00000554973 PCDH10Q9P2E7 1040 aa10.57□□□□□ -0.72
FCF1-207ENST00000554973 SNPHO15079 494 aa10.56□□□□□ -0.72
FCF1-207ENST00000554973 PPP1R37O75864 691 aa10.56□□□□□ -0.72
FCF1-207ENST00000554973 ILDR1Q86SU0 546 aaPredicted RBP10.56□□□□□ -0.72
FCF1-207ENST00000554973 KRI1Q8N9T8 703 aaKnown RBP10.55□□□□□ -0.72
FCF1-207ENST00000554973 ARID3AQ99856 593 aa10.55□□□□□ -0.72
FCF1-207ENST00000554973 PLSCR2Q9NRY7 297 aa10.55□□□□□ -0.72
FCF1-207ENST00000554973 EFCAB3Q8N7B9 438 aa10.52□□□□□ -0.73
FCF1-207ENST00000554973 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
FCF1-207ENST00000554973 NLRP6P59044 892 aa10.51□□□□□ -0.73
FCF1-207ENST00000554973 DPY19L2Q6NUT2 758 aa10.51□□□□□ -0.73
FCF1-207ENST00000554973 BOLA1Q9Y3E2 137 aa10.51□□□□□ -0.73
FCF1-207ENST00000554973 ST18O60284 1047 aa10.5□□□□□ -0.73
FCF1-207ENST00000554973 PDE4AP27815 886 aa10.5□□□□□ -0.73
FCF1-207ENST00000554973 GPIHBP1Q8IV16 184 aa10.5□□□□□ -0.73
FCF1-207ENST00000554973 TRIM66O15016 1216 aa10.49□□□□□ -0.73
FCF1-207ENST00000554973 PDE4DQ08499 809 aa10.49□□□□□ -0.73
FCF1-207ENST00000554973 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
FCF1-207ENST00000554973 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
FCF1-207ENST00000554973 MFSD10Q14728 455 aa10.48□□□□□ -0.73
FCF1-207ENST00000554973 NCKAP5LQ9HCH0 1330 aa10.48□□□□□ -0.73
FCF1-207ENST00000554973 SOX12O15370 315 aa10.47□□□□□ -0.73
FCF1-207ENST00000554973 ZBTB7CA1YPR0 619 aa10.46□□□□□ -0.73
FCF1-207ENST00000554973 APBB1O00213 710 aa10.46□□□□□ -0.73
FCF1-207ENST00000554973 PDIA4P13667 645 aaKnown RBP10.46□□□□□ -0.73
FCF1-207ENST00000554973 TMEM121BQ9BXQ6 578 aaPredicted RBP10.46□□□□□ -0.73
FCF1-207ENST00000554973 FLIIQ13045 1269 aa10.45□□□□□ -0.74
FCF1-207ENST00000554973 RBM26Q5T8P6 1007 aaKnown RBP10.45□□□□□ -0.74
FCF1-207ENST00000554973 CCDC9Q9Y3X0 531 aaKnown RBP10.44□□□□□ -0.74
FCF1-207ENST00000554973 CAMK2BQ13554 666 aa10.43□□□□□ -0.74
FCF1-207ENST00000554973 ARID3CA6NKF2 412 aa10.41□□□□□ -0.74
FCF1-207ENST00000554973 DDX27Q96GQ7 796 aaKnown RBP10.41□□□□□ -0.74
FCF1-207ENST00000554973 CRISPLD2Q9H0B8 497 aa10.41□□□□□ -0.74
FCF1-207ENST00000554973 ZNF316A6NFI3 1004 aaPredicted RBP10.4□□□□□ -0.74
FCF1-207ENST00000554973 PHF8Q9UPP1 1060 aa10.4□□□□□ -0.74
FCF1-207ENST00000554973 MLLT3P42568 568 aaPredicted RBP10.39□□□□□ -0.75
FCF1-207ENST00000554973 CDAN1Q8IWY9 1227 aa10.39□□□□□ -0.75
FCF1-207ENST00000554973 FAM117AQ9C073 453 aa10.39□□□□□ -0.75
FCF1-207ENST00000554973 DDRGK1Q96HY6 314 aa10.38□□□□□ -0.75
FCF1-207ENST00000554973 MICALL2Q8IY33 904 aa10.35□□□□□ -0.75
FCF1-207ENST00000554973 A6NJR5 290 aa10.34□□□□□ -0.75
FCF1-207ENST00000554973 MARVELD3Q96A59 401 aa10.34□□□□□ -0.75
FCF1-207ENST00000554973 MS4A4AQ96JQ5 239 aa10.34□□□□□ -0.75
FCF1-207ENST00000554973 PLEKHG3A1L390 1219 aa10.33□□□□□ -0.76
FCF1-207ENST00000554973 EMP3P54852 163 aa10.32□□□□□ -0.76
FCF1-207ENST00000554973 DOK7Q18PE1 504 aa10.31□□□□□ -0.76
FCF1-207ENST00000554973 ZNF710Q8N1W2 664 aa10.31□□□□□ -0.76
FCF1-207ENST00000554973 NECTIN2Q92692 538 aa10.31□□□□□ -0.76
FCF1-207ENST00000554973 GOPCQ9HD26 462 aa10.31□□□□□ -0.76
FCF1-207ENST00000554973 MINK1Q8N4C8 1332 aaPredicted RBP10.31□□□□□ -0.76
FCF1-207ENST00000554973 TRAK2O60296 914 aa10.29□□□□□ -0.76
FCF1-207ENST00000554973 SPDYE16A6NNV3 312 aaPredicted RBP10.28□□□□□ -0.76
FCF1-207ENST00000554973 RIMBP2O15034 1052 aa10.28□□□□□ -0.76
FCF1-207ENST00000554973 ONECUT3O60422 494 aaPredicted RBP10.28□□□□□ -0.76
FCF1-207ENST00000554973 CCDC82Q8N4S0 544 aa10.28□□□□□ -0.76
FCF1-207ENST00000554973 HOXB3P14651 431 aaPredicted RBP10.27□□□□□ -0.77
FCF1-207ENST00000554973 AMHR2Q16671 573 aa10.26□□□□□ -0.77
FCF1-207ENST00000554973 GPR37O15354 613 aa10.25□□□□□ -0.77
FCF1-207ENST00000554973 FAM205CA6NFA0 338 aa10.24□□□□□ -0.77
FCF1-207ENST00000554973 TMEM92Q6UXU6 159 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms