RNA–Protein interactions for RNA: ENST00000554543.1

ITGA7-210, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 707 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-210ENST00000554543 MTUS2Q5JR59 1369 aa19.95■□□□□ 0.79
ITGA7-210ENST00000554543 SCAPERQ9BY12 1400 aa19.95■□□□□ 0.78
ITGA7-210ENST00000554543 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
ITGA7-210ENST00000554543 SIGLEC1Q9BZZ2 1709 aa19.94■□□□□ 0.78
ITGA7-210ENST00000554543 ZNF777Q9ULD5 760 aaPredicted RBP19.94■□□□□ 0.78
ITGA7-210ENST00000554543 TIAM1Q13009 1591 aa19.93■□□□□ 0.78
ITGA7-210ENST00000554543 ITSN2Q9NZM3 1697 aa19.92■□□□□ 0.78
ITGA7-210ENST00000554543 YEATS2Q9ULM3 1422 aa19.92■□□□□ 0.78
ITGA7-210ENST00000554543 EHBP1L1Q8N3D4 1523 aa19.92■□□□□ 0.78
ITGA7-210ENST00000554543 EFCAB2Q5VUJ9 269 aa19.91■□□□□ 0.78
ITGA7-210ENST00000554543 ARHGEF40Q8TER5 1519 aa19.91■□□□□ 0.78
ITGA7-210ENST00000554543 PHLDB1Q86UU1 1377 aa19.9■□□□□ 0.78
ITGA7-210ENST00000554543 POGZQ7Z3K3 1410 aa19.9■□□□□ 0.78
ITGA7-210ENST00000554543 SAMD9LQ8IVG5 1584 aa19.9■□□□□ 0.78
ITGA7-210ENST00000554543 ARHGEF12Q9NZN5 1544 aa19.89■□□□□ 0.77
ITGA7-210ENST00000554543 ABCC1P33527 1531 aa19.87■□□□□ 0.77
ITGA7-210ENST00000554543 ZFYVE16Q7Z3T8 1539 aa19.87■□□□□ 0.77
ITGA7-210ENST00000554543 GPATCH8Q9UKJ3 1502 aaKnown RBP19.87■□□□□ 0.77
ITGA7-210ENST00000554543 SUPT6HQ7KZ85 1726 aaKnown RBP19.86■□□□□ 0.77
ITGA7-210ENST00000554543 AFAP1Q8N556 730 aa19.86■□□□□ 0.77
ITGA7-210ENST00000554543 MYT1LQ9UL68 1186 aa19.86■□□□□ 0.77
ITGA7-210ENST00000554543 ZMYM4Q5VZL5 1548 aa19.86■□□□□ 0.77
ITGA7-210ENST00000554543 SYCP2Q9BX26 1530 aa19.86■□□□□ 0.77
ITGA7-210ENST00000554543 ARID4BQ4LE39 1312 aaPredicted RBP19.85■□□□□ 0.77
ITGA7-210ENST00000554543 TRAPPC8Q9Y2L5 1435 aa19.85■□□□□ 0.77
ITGA7-210ENST00000554543 CCNB3Q8WWL7 1395 aa19.84■□□□□ 0.77
ITGA7-210ENST00000554543 KANK4Q5T7N3 995 aaPredicted RBP19.84■□□□□ 0.77
ITGA7-210ENST00000554543 ZNF644Q9H582 1327 aaPredicted RBP19.82■□□□□ 0.76
ITGA7-210ENST00000554543 NCOA2Q15596 1464 aa19.82■□□□□ 0.76
ITGA7-210ENST00000554543 PLPPR3Q6T4P5 718 aa19.81■□□□□ 0.76
ITGA7-210ENST00000554543 ABCA6Q8N139 1617 aa19.8■□□□□ 0.76
ITGA7-210ENST00000554543 BCORL1Q5H9F3 1711 aa19.8■□□□□ 0.76
ITGA7-210ENST00000554543 HECW2Q9P2P5 1572 aa19.8■□□□□ 0.76
ITGA7-210ENST00000554543 HNRNPMP52272 730 aaKnown RBP eCLIP19.8■□□□□ 0.76
ITGA7-210ENST00000554543 MLECQ14165 292 aa19.8■□□□□ 0.76
ITGA7-210ENST00000554543 MADDQ8WXG6 1647 aa19.8■□□□□ 0.76
ITGA7-210ENST00000554543 LRRC9Q6ZRR7 1453 aa19.79■□□□□ 0.76
ITGA7-210ENST00000554543 CFDP1Q9UEE9 299 aaPredicted RBP19.79■□□□□ 0.76
ITGA7-210ENST00000554543 KDM5CP41229 1560 aa19.78■□□□□ 0.76
ITGA7-210ENST00000554543 RIMS1Q86UR5 1692 aaKnown RBP19.78■□□□□ 0.76
ITGA7-210ENST00000554543 ZNF518AQ6AHZ1 1483 aa19.78■□□□□ 0.76
ITGA7-210ENST00000554543 KIDINS220Q9ULH0 1771 aa19.76■□□□□ 0.75
ITGA7-210ENST00000554543 ADAMTSL3P82987 1691 aa19.76■□□□□ 0.75
ITGA7-210ENST00000554543 DIP2CQ9Y2E4 1556 aa19.76■□□□□ 0.75
ITGA7-210ENST00000554543 FER1L4A9Z1Z3 1794 aa19.72■□□□□ 0.75
ITGA7-210ENST00000554543 CAMSAP2Q08AD1 1489 aa19.71■□□□□ 0.75
ITGA7-210ENST00000554543 PPARGC1BQ86YN6 1023 aaKnown RBP19.7■□□□□ 0.74
ITGA7-210ENST00000554543 ATP10AO60312 1499 aa19.7■□□□□ 0.74
ITGA7-210ENST00000554543 MAGI2Q86UL8 1455 aa19.7■□□□□ 0.74
ITGA7-210ENST00000554543 APLP2Q06481 763 aa19.69■□□□□ 0.74
ITGA7-210ENST00000554543 C9orf84Q5VXU9 1444 aa19.68■□□□□ 0.74
ITGA7-210ENST00000554543 ATP7AQ04656 1500 aa19.66■□□□□ 0.74
ITGA7-210ENST00000554543 MAP3K1Q13233 1512 aa19.66■□□□□ 0.74
ITGA7-210ENST00000554543 INO80Q9ULG1 1556 aaPredicted RBP19.66■□□□□ 0.74
ITGA7-210ENST00000554543 SPAG9O60271 1321 aaKnown RBP19.66■□□□□ 0.74
ITGA7-210ENST00000554543 PTPRMP28827 1452 aa19.65■□□□□ 0.74
ITGA7-210ENST00000554543 MLH3Q9UHC1 1453 aa19.65■□□□□ 0.74
ITGA7-210ENST00000554543 PLEKHH2Q8IVE3 1493 aa19.63■□□□□ 0.73
ITGA7-210ENST00000554543 ADGBQ8N7X0 1667 aa19.62■□□□□ 0.73
ITGA7-210ENST00000554543 MBD5Q9P267 1494 aa19.62■□□□□ 0.73
ITGA7-210ENST00000554543 KIAA1107Q9UPP5 1409 aa19.6■□□□□ 0.73
ITGA7-210ENST00000554543 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
ITGA7-210ENST00000554543 PTPN23Q9H3S7 1636 aa19.58■□□□□ 0.72
ITGA7-210ENST00000554543 CCDC141Q6ZP82 1450 aa19.57■□□□□ 0.72
ITGA7-210ENST00000554543 CEBPAP49715 358 aaPredicted RBP19.56■□□□□ 0.72
ITGA7-210ENST00000554543 REREQ9P2R6 1566 aa19.56■□□□□ 0.72
ITGA7-210ENST00000554543 ARHGEF5Q12774 1597 aa19.53■□□□□ 0.72
ITGA7-210ENST00000554543 A2MP01023 1474 aa19.53■□□□□ 0.72
ITGA7-210ENST00000554543 CLTCQ00610 1675 aaKnown RBP19.52■□□□□ 0.72
ITGA7-210ENST00000554543 PLXNC1O60486 1568 aa19.52■□□□□ 0.71
ITGA7-210ENST00000554543 CROCC2H7BZ55 1655 aa19.52■□□□□ 0.71
ITGA7-210ENST00000554543 C3P01024 1663 aa19.51■□□□□ 0.71
ITGA7-210ENST00000554543 AGLP35573 1532 aa19.49■□□□□ 0.71
ITGA7-210ENST00000554543 FGD6Q6ZV73 1430 aa19.49■□□□□ 0.71
ITGA7-210ENST00000554543 GGT6Q6P531 493 aa19.47■□□□□ 0.71
ITGA7-210ENST00000554543 MIA2Q96PC5 1412 aa19.46■□□□□ 0.71
ITGA7-210ENST00000554543 FAM50AQ14320 339 aaKnown RBP19.46■□□□□ 0.71
ITGA7-210ENST00000554543 HSPA2P54652 639 aa19.44■□□□□ 0.7
ITGA7-210ENST00000554543 CHIC2Q9UKJ5 165 aa19.44■□□□□ 0.7
ITGA7-210ENST00000554543 DNMT1P26358 1616 aaKnown RBP19.43■□□□□ 0.7
ITGA7-210ENST00000554543 ESF1Q9H501 851 aaKnown RBP19.43■□□□□ 0.7
ITGA7-210ENST00000554543 MAST1Q9Y2H9 1570 aa19.43■□□□□ 0.7
ITGA7-210ENST00000554543 RTEL1-TNFRSF6BF6WH68 1400 aa19.42■□□□□ 0.7
ITGA7-210ENST00000554543 ABCC5O15440 1437 aa19.42■□□□□ 0.7
ITGA7-210ENST00000554543 TSPY4P0CV99 314 aa19.42■□□□□ 0.7
ITGA7-210ENST00000554543 TSPY10P0CW01 314 aa19.42■□□□□ 0.7
ITGA7-210ENST00000554543 LMTK3Q96Q04 1460 aa19.41■□□□□ 0.7
ITGA7-210ENST00000554543 KIF3BO15066 747 aa19.41■□□□□ 0.7
ITGA7-210ENST00000554543 DAPK1P53355 1430 aa19.41■□□□□ 0.7
ITGA7-210ENST00000554543 TCOF1Q13428 1488 aaKnown RBP19.41■□□□□ 0.7
ITGA7-210ENST00000554543 PREX1Q8TCU6 1659 aa19.4■□□□□ 0.7
ITGA7-210ENST00000554543 DHX29Q7Z478 1369 aaKnown RBP19.39■□□□□ 0.69
ITGA7-210ENST00000554543 RRP7BPQ9NSQ0 103 aa19.38■□□□□ 0.69
ITGA7-210ENST00000554543 CFAP65Q6ZU64 1925 aaKnown RBP19.37■□□□□ 0.69
ITGA7-210ENST00000554543 CEP152O94986 1710 aa19.37■□□□□ 0.69
ITGA7-210ENST00000554543 MROH2AA6NES4 1674 aa19.37■□□□□ 0.69
ITGA7-210ENST00000554543 ITGAEP38570 1179 aa19.37■□□□□ 0.69
ITGA7-210ENST00000554543 RSPH4AQ5TD94 716 aa19.34■□□□□ 0.69
ITGA7-210ENST00000554543 KIF15Q9NS87 1388 aa19.33■□□□□ 0.69
ITGA7-210ENST00000554543 SHANK2Q9UPX8 1470 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms