RNA–Protein interactions for RNA: ENST00000554541.5

PSMA6-206, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 925 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-206ENST00000554541 MAGI2Q86UL8 1455 aa18.77■□□□□ 0.6
PSMA6-206ENST00000554541 ADAMTSL3P82987 1691 aa18.76■□□□□ 0.59
PSMA6-206ENST00000554541 ARHGAP5Q13017 1502 aa18.75■□□□□ 0.59
PSMA6-206ENST00000554541 CDC42BPBQ9Y5S2 1711 aa18.75■□□□□ 0.59
PSMA6-206ENST00000554541 ZFYVE16Q7Z3T8 1539 aa18.74■□□□□ 0.59
PSMA6-206ENST00000554541 BCORL1Q5H9F3 1711 aa18.74■□□□□ 0.59
PSMA6-206ENST00000554541 PREX2Q70Z35 1606 aa18.74■□□□□ 0.59
PSMA6-206ENST00000554541 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
PSMA6-206ENST00000554541 YEATS2Q9ULM3 1422 aa18.72■□□□□ 0.59
PSMA6-206ENST00000554541 ZNF518AQ6AHZ1 1483 aa18.7■□□□□ 0.58
PSMA6-206ENST00000554541 CDC42BPAQ5VT25 1732 aa18.69■□□□□ 0.58
PSMA6-206ENST00000554541 ARID4BQ4LE39 1312 aaPredicted RBP18.69■□□□□ 0.58
PSMA6-206ENST00000554541 KDM5CP41229 1560 aa18.68■□□□□ 0.58
PSMA6-206ENST00000554541 SIGLEC1Q9BZZ2 1709 aa18.68■□□□□ 0.58
PSMA6-206ENST00000554541 PTPRMP28827 1452 aa18.67■□□□□ 0.58
PSMA6-206ENST00000554541 ABCC1P33527 1531 aa18.66■□□□□ 0.58
PSMA6-206ENST00000554541 MADDQ8WXG6 1647 aa18.66■□□□□ 0.58
PSMA6-206ENST00000554541 HECW2Q9P2P5 1572 aa18.65■□□□□ 0.58
PSMA6-206ENST00000554541 ATP10AO60312 1499 aa18.65■□□□□ 0.58
PSMA6-206ENST00000554541 AFAP1Q8N556 730 aa18.64■□□□□ 0.57
PSMA6-206ENST00000554541 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.57
PSMA6-206ENST00000554541 ITSN2Q9NZM3 1697 aa18.63■□□□□ 0.57
PSMA6-206ENST00000554541 ARHGEF12Q9NZN5 1544 aa18.63■□□□□ 0.57
PSMA6-206ENST00000554541 C9orf84Q5VXU9 1444 aa18.62■□□□□ 0.57
PSMA6-206ENST00000554541 MLH3Q9UHC1 1453 aa18.61■□□□□ 0.57
PSMA6-206ENST00000554541 MTUS2Q5JR59 1369 aa18.61■□□□□ 0.57
PSMA6-206ENST00000554541 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
PSMA6-206ENST00000554541 TRAPPC8Q9Y2L5 1435 aa18.6■□□□□ 0.57
PSMA6-206ENST00000554541 RIMS1Q86UR5 1692 aaKnown RBP18.6■□□□□ 0.57
PSMA6-206ENST00000554541 SAMD9LQ8IVG5 1584 aa18.59■□□□□ 0.57
PSMA6-206ENST00000554541 EHBP1L1Q8N3D4 1523 aa18.59■□□□□ 0.57
PSMA6-206ENST00000554541 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
PSMA6-206ENST00000554541 REREQ9P2R6 1566 aa18.58■□□□□ 0.56
PSMA6-206ENST00000554541 CCNB3Q8WWL7 1395 aa18.57■□□□□ 0.56
PSMA6-206ENST00000554541 ABCA6Q8N139 1617 aa18.56■□□□□ 0.56
PSMA6-206ENST00000554541 CFDP1Q9UEE9 299 aaPredicted RBP18.55■□□□□ 0.56
PSMA6-206ENST00000554541 VPS8Q8N3P4 1428 aa18.55■□□□□ 0.56
PSMA6-206ENST00000554541 FER1L4A9Z1Z3 1794 aa18.55■□□□□ 0.56
PSMA6-206ENST00000554541 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
PSMA6-206ENST00000554541 SYCP2Q9BX26 1530 aa18.54■□□□□ 0.56
PSMA6-206ENST00000554541 PLEKHH2Q8IVE3 1493 aa18.54■□□□□ 0.56
PSMA6-206ENST00000554541 ZNF777Q9ULD5 760 aaPredicted RBP18.54■□□□□ 0.56
PSMA6-206ENST00000554541 KIDINS220Q9ULH0 1771 aa18.54■□□□□ 0.56
PSMA6-206ENST00000554541 KIAA1107Q9UPP5 1409 aa18.54■□□□□ 0.56
PSMA6-206ENST00000554541 MYT1LQ9UL68 1186 aa18.53■□□□□ 0.56
PSMA6-206ENST00000554541 MLECQ14165 292 aa18.52■□□□□ 0.56
PSMA6-206ENST00000554541 AGLP35573 1532 aa18.5■□□□□ 0.55
PSMA6-206ENST00000554541 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
PSMA6-206ENST00000554541 HNRNPMP52272 730 aaKnown RBP eCLIP18.49■□□□□ 0.555e-8■■■■■ 26.8
PSMA6-206ENST00000554541 NCOA2Q15596 1464 aa18.47■□□□□ 0.55
PSMA6-206ENST00000554541 LMTK3Q96Q04 1460 aa18.47■□□□□ 0.55
PSMA6-206ENST00000554541 SPAG9O60271 1321 aaKnown RBP18.47■□□□□ 0.55
PSMA6-206ENST00000554541 INO80Q9ULG1 1556 aaPredicted RBP18.47■□□□□ 0.55
PSMA6-206ENST00000554541 ATP7AQ04656 1500 aa18.45■□□□□ 0.54
PSMA6-206ENST00000554541 MAP3K1Q13233 1512 aa18.45■□□□□ 0.54
PSMA6-206ENST00000554541 MBD5Q9P267 1494 aa18.45■□□□□ 0.54
PSMA6-206ENST00000554541 LRRC9Q6ZRR7 1453 aa18.44■□□□□ 0.54
PSMA6-206ENST00000554541 ZNF644Q9H582 1327 aaPredicted RBP18.44■□□□□ 0.54
PSMA6-206ENST00000554541 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
PSMA6-206ENST00000554541 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
PSMA6-206ENST00000554541 CAMSAP2Q08AD1 1489 aa18.39■□□□□ 0.53
PSMA6-206ENST00000554541 A2MP01023 1474 aa18.38■□□□□ 0.53
PSMA6-206ENST00000554541 ADGBQ8N7X0 1667 aa18.38■□□□□ 0.53
PSMA6-206ENST00000554541 CEBPAP49715 358 aaPredicted RBP18.37■□□□□ 0.53
PSMA6-206ENST00000554541 RTEL1-TNFRSF6BF6WH68 1400 aa18.37■□□□□ 0.53
PSMA6-206ENST00000554541 C3P01024 1663 aa18.36■□□□□ 0.53
PSMA6-206ENST00000554541 KANK4Q5T7N3 995 aaPredicted RBP18.36■□□□□ 0.53
PSMA6-206ENST00000554541 PREX1Q8TCU6 1659 aa18.36■□□□□ 0.53
PSMA6-206ENST00000554541 CCDC141Q6ZP82 1450 aa18.35■□□□□ 0.53
PSMA6-206ENST00000554541 CNTLNQ9NXG0 1405 aa18.35■□□□□ 0.53
PSMA6-206ENST00000554541 RSPH4AQ5TD94 716 aa18.35■□□□□ 0.53
PSMA6-206ENST00000554541 SETD1BQ9UPS6 1966 aaKnown RBP18.35■□□□□ 0.53
PSMA6-206ENST00000554541 ARHGEF5Q12774 1597 aa18.34■□□□□ 0.53
PSMA6-206ENST00000554541 ESF1Q9H501 851 aaKnown RBP18.33■□□□□ 0.52
PSMA6-206ENST00000554541 MROH2AA6NES4 1674 aa18.32■□□□□ 0.52
PSMA6-206ENST00000554541 HSPA2P54652 639 aa18.31■□□□□ 0.52
PSMA6-206ENST00000554541 MYOM3Q5VTT5 1437 aa18.3■□□□□ 0.52
PSMA6-206ENST00000554541 MIA2Q96PC5 1412 aa18.3■□□□□ 0.52
PSMA6-206ENST00000554541 DHX29Q7Z478 1369 aaKnown RBP18.29■□□□□ 0.52
PSMA6-206ENST00000554541 UHRF1BP1Q6BDS2 1440 aa18.27■□□□□ 0.52
PSMA6-206ENST00000554541 CLTCQ00610 1675 aaKnown RBP18.26■□□□□ 0.51
PSMA6-206ENST00000554541 APLP2Q06481 763 aa18.26■□□□□ 0.51
PSMA6-206ENST00000554541 PPP6R1Q9UPN7 881 aa18.26■□□□□ 0.51
PSMA6-206ENST00000554541 ZMYM3Q14202 1370 aa18.26■□□□□ 0.51
PSMA6-206ENST00000554541 NPATQ14207 1427 aa18.25■□□□□ 0.51
PSMA6-206ENST00000554541 MAST1Q9Y2H9 1570 aa18.25■□□□□ 0.51
PSMA6-206ENST00000554541 TSPY4P0CV99 314 aa18.24■□□□□ 0.51
PSMA6-206ENST00000554541 TSPY10P0CW01 314 aa18.24■□□□□ 0.51
PSMA6-206ENST00000554541 GGT6Q6P531 493 aa18.24■□□□□ 0.51
PSMA6-206ENST00000554541 ILDR1Q86SU0 546 aaPredicted RBP18.22■□□□□ 0.51
PSMA6-206ENST00000554541 STRCQ7RTU9 1775 aa18.2■□□□□ 0.5
PSMA6-206ENST00000554541 FAM135AQ9P2D6 1515 aa18.2■□□□□ 0.5
PSMA6-206ENST00000554541 KIF3BO15066 747 aa18.19■□□□□ 0.5
PSMA6-206ENST00000554541 PTPRKQ15262 1439 aa18.19■□□□□ 0.5
PSMA6-206ENST00000554541 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
PSMA6-206ENST00000554541 KDM5DQ9BY66 1539 aa18.16■□□□□ 0.5
PSMA6-206ENST00000554541 FGD6Q6ZV73 1430 aa18.15■□□□□ 0.5
PSMA6-206ENST00000554541 TCOF1Q13428 1488 aaKnown RBP18.15■□□□□ 0.5
PSMA6-206ENST00000554541 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
PSMA6-206ENST00000554541 CROCC2H7BZ55 1655 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms