RNA–Protein interactions for RNA: ENST00000554456.1

PSMA3-206, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-206ENST00000554456 BCORL1Q5H9F3 1711 aa24.72■■□□□ 1.55
PSMA3-206ENST00000554456 ADAMTSL3P82987 1691 aa24.72■■□□□ 1.55
PSMA3-206ENST00000554456 PREX2Q70Z35 1606 aa24.72■■□□□ 1.55
PSMA3-206ENST00000554456 ZFYVE16Q7Z3T8 1539 aa24.72■■□□□ 1.55
PSMA3-206ENST00000554456 SCAPERQ9BY12 1400 aa24.72■■□□□ 1.55
PSMA3-206ENST00000554456 SIGLEC1Q9BZZ2 1709 aa24.7■■□□□ 1.54
PSMA3-206ENST00000554456 YEATS2Q9ULM3 1422 aa24.69■■□□□ 1.54
PSMA3-206ENST00000554456 CDC42BPAQ5VT25 1732 aa24.69■■□□□ 1.54
PSMA3-206ENST00000554456 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
PSMA3-206ENST00000554456 EFCAB2Q5VUJ9 269 aa24.68■■□□□ 1.54
PSMA3-206ENST00000554456 MADDQ8WXG6 1647 aa24.68■■□□□ 1.54
PSMA3-206ENST00000554456 ARID4BQ4LE39 1312 aaPredicted RBP24.66■■□□□ 1.54
PSMA3-206ENST00000554456 HECW2Q9P2P5 1572 aa24.66■■□□□ 1.54
PSMA3-206ENST00000554456 MAGI2Q86UL8 1455 aa24.64■■□□□ 1.53
PSMA3-206ENST00000554456 ABCC1P33527 1531 aa24.61■■□□□ 1.53
PSMA3-206ENST00000554456 RIMS1Q86UR5 1692 aaKnown RBP24.61■■□□□ 1.53
PSMA3-206ENST00000554456 ITSN2Q9NZM3 1697 aa24.61■■□□□ 1.53
PSMA3-206ENST00000554456 KDM5CP41229 1560 aa24.6■■□□□ 1.53
PSMA3-206ENST00000554456 PTPRMP28827 1452 aa24.6■■□□□ 1.53
PSMA3-206ENST00000554456 ZNF518AQ6AHZ1 1483 aa24.6■■□□□ 1.53
PSMA3-206ENST00000554456 ARHGEF12Q9NZN5 1544 aa24.55■■□□□ 1.52
PSMA3-206ENST00000554456 SAMD9LQ8IVG5 1584 aa24.54■■□□□ 1.52
PSMA3-206ENST00000554456 FER1L4A9Z1Z3 1794 aa24.53■■□□□ 1.52
PSMA3-206ENST00000554456 AFAP1Q8N556 730 aa24.53■■□□□ 1.52
PSMA3-206ENST00000554456 ABCA6Q8N139 1617 aa24.53■■□□□ 1.52
PSMA3-206ENST00000554456 C9orf84Q5VXU9 1444 aa24.52■■□□□ 1.52
PSMA3-206ENST00000554456 DIP2CQ9Y2E4 1556 aa24.52■■□□□ 1.52
PSMA3-206ENST00000554456 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
PSMA3-206ENST00000554456 MTUS2Q5JR59 1369 aa24.52■■□□□ 1.52
PSMA3-206ENST00000554456 ATP10AO60312 1499 aa24.51■■□□□ 1.51
PSMA3-206ENST00000554456 GPATCH8Q9UKJ3 1502 aaKnown RBP24.51■■□□□ 1.51
PSMA3-206ENST00000554456 TRAPPC8Q9Y2L5 1435 aa24.51■■□□□ 1.51
PSMA3-206ENST00000554456 EHBP1L1Q8N3D4 1523 aa24.51■■□□□ 1.51
PSMA3-206ENST00000554456 SYCP2Q9BX26 1530 aa24.49■■□□□ 1.51
PSMA3-206ENST00000554456 MLECQ14165 292 aa24.47■■□□□ 1.51
PSMA3-206ENST00000554456 MYT1LQ9UL68 1186 aa24.47■■□□□ 1.51
PSMA3-206ENST00000554456 TIAM1Q13009 1591 aa24.46■■□□□ 1.51
PSMA3-206ENST00000554456 ZNF777Q9ULD5 760 aaPredicted RBP24.46■■□□□ 1.51
PSMA3-206ENST00000554456 KIDINS220Q9ULH0 1771 aa24.45■■□□□ 1.5
PSMA3-206ENST00000554456 MLH3Q9UHC1 1453 aa24.45■■□□□ 1.5
PSMA3-206ENST00000554456 CCNB3Q8WWL7 1395 aa24.44■■□□□ 1.5
PSMA3-206ENST00000554456 REREQ9P2R6 1566 aa24.42■■□□□ 1.5
PSMA3-206ENST00000554456 PLPPR3Q6T4P5 718 aa24.41■■□□□ 1.5
PSMA3-206ENST00000554456 VPS8Q8N3P4 1428 aa24.39■■□□□ 1.5
PSMA3-206ENST00000554456 SUPT6HQ7KZ85 1726 aaKnown RBP24.38■■□□□ 1.49
PSMA3-206ENST00000554456 CFDP1Q9UEE9 299 aaPredicted RBP24.38■■□□□ 1.49
PSMA3-206ENST00000554456 INO80Q9ULG1 1556 aaPredicted RBP24.35■■□□□ 1.49
PSMA3-206ENST00000554456 PLEKHH2Q8IVE3 1493 aa24.35■■□□□ 1.49
PSMA3-206ENST00000554456 LMTK3Q96Q04 1460 aa24.35■■□□□ 1.49
PSMA3-206ENST00000554456 HNRNPMP52272 730 aaKnown RBP eCLIP24.35■■□□□ 1.49
PSMA3-206ENST00000554456 ATP7AQ04656 1500 aa24.34■■□□□ 1.49
PSMA3-206ENST00000554456 NCOA2Q15596 1464 aa24.32■■□□□ 1.48
PSMA3-206ENST00000554456 KIAA1107Q9UPP5 1409 aa24.32■■□□□ 1.48
PSMA3-206ENST00000554456 AGLP35573 1532 aa24.31■■□□□ 1.48
PSMA3-206ENST00000554456 SPAG9O60271 1321 aaKnown RBP24.3■■□□□ 1.48
PSMA3-206ENST00000554456 ZNF644Q9H582 1327 aaPredicted RBP24.3■■□□□ 1.48
PSMA3-206ENST00000554456 LRRC9Q6ZRR7 1453 aa24.26■■□□□ 1.47
PSMA3-206ENST00000554456 C3P01024 1663 aa24.25■■□□□ 1.47
PSMA3-206ENST00000554456 CAMSAP2Q08AD1 1489 aa24.25■■□□□ 1.47
PSMA3-206ENST00000554456 PREX1Q8TCU6 1659 aa24.24■■□□□ 1.47
PSMA3-206ENST00000554456 MBD5Q9P267 1494 aa24.24■■□□□ 1.47
PSMA3-206ENST00000554456 PLXNC1O60486 1568 aa24.24■■□□□ 1.47
PSMA3-206ENST00000554456 ADGBQ8N7X0 1667 aa24.23■■□□□ 1.47
PSMA3-206ENST00000554456 CEBPAP49715 358 aaPredicted RBP24.22■■□□□ 1.47
PSMA3-206ENST00000554456 MAP3K1Q13233 1512 aa24.2■■□□□ 1.46
PSMA3-206ENST00000554456 A2MP01023 1474 aa24.19■■□□□ 1.46
PSMA3-206ENST00000554456 HSPA2P54652 639 aa24.19■■□□□ 1.46
PSMA3-206ENST00000554456 CCDC141Q6ZP82 1450 aa24.17■■□□□ 1.46
PSMA3-206ENST00000554456 KANK4Q5T7N3 995 aaPredicted RBP24.16■■□□□ 1.46
PSMA3-206ENST00000554456 CLTCQ00610 1675 aaKnown RBP24.15■■□□□ 1.46
PSMA3-206ENST00000554456 MROH2AA6NES4 1674 aa24.15■■□□□ 1.46
PSMA3-206ENST00000554456 ESF1Q9H501 851 aaKnown RBP24.14■■□□□ 1.45
PSMA3-206ENST00000554456 ARHGEF5Q12774 1597 aa24.12■■□□□ 1.45
PSMA3-206ENST00000554456 CNTLNQ9NXG0 1405 aa24.11■■□□□ 1.45
PSMA3-206ENST00000554456 RTEL1-TNFRSF6BF6WH68 1400 aa24.1■■□□□ 1.45
PSMA3-206ENST00000554456 UHRF1BP1Q6BDS2 1440 aa24.09■■□□□ 1.45
PSMA3-206ENST00000554456 SETD1BQ9UPS6 1966 aaKnown RBP24.07■■□□□ 1.44
PSMA3-206ENST00000554456 MYOM3Q5VTT5 1437 aa24.07■■□□□ 1.44
PSMA3-206ENST00000554456 ILDR1Q86SU0 546 aaPredicted RBP24.05■■□□□ 1.44
PSMA3-206ENST00000554456 GGT6Q6P531 493 aa24.04■■□□□ 1.44
PSMA3-206ENST00000554456 STRCQ7RTU9 1775 aa24.02■■□□□ 1.44
PSMA3-206ENST00000554456 DHX29Q7Z478 1369 aaKnown RBP24.02■■□□□ 1.44
PSMA3-206ENST00000554456 MAST1Q9Y2H9 1570 aa24.01■■□□□ 1.43
PSMA3-206ENST00000554456 APLP2Q06481 763 aa24.01■■□□□ 1.43
PSMA3-206ENST00000554456 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
PSMA3-206ENST00000554456 ZMYM3Q14202 1370 aa24■■□□□ 1.43
PSMA3-206ENST00000554456 RSPH4AQ5TD94 716 aa23.99■■□□□ 1.43
PSMA3-206ENST00000554456 MYO3AQ8NEV4 1616 aa23.99■■□□□ 1.43
PSMA3-206ENST00000554456 PTPN23Q9H3S7 1636 aa23.98■■□□□ 1.43
PSMA3-206ENST00000554456 CROCC2H7BZ55 1655 aa23.98■■□□□ 1.43
PSMA3-206ENST00000554456 NPATQ14207 1427 aa23.97■■□□□ 1.43
PSMA3-206ENST00000554456 TSPY4P0CV99 314 aa23.95■■□□□ 1.42
PSMA3-206ENST00000554456 TSPY10P0CW01 314 aa23.95■■□□□ 1.42
PSMA3-206ENST00000554456 KIF3BO15066 747 aa23.94■■□□□ 1.42
PSMA3-206ENST00000554456 ZNF142P52746 1687 aaPredicted RBP23.93■■□□□ 1.42
PSMA3-206ENST00000554456 KDM5DQ9BY66 1539 aa23.93■■□□□ 1.42
PSMA3-206ENST00000554456 PTPRKQ15262 1439 aa23.93■■□□□ 1.42
PSMA3-206ENST00000554456 RNF17Q9BXT8 1623 aaKnown RBP23.91■■□□□ 1.42
PSMA3-206ENST00000554456 EIF2AK4Q9P2K8 1649 aaKnown RBP23.89■■□□□ 1.42
PSMA3-206ENST00000554456 FGD6Q6ZV73 1430 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms