RNA–Protein interactions for RNA: ENST00000553817.1

KLHL28-203, Transcript of kelch like family member 28, humanhuman

TSL 4

Gene KLHL28, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-203ENST00000553817 LARP6Q9BRS8 491 aaKnown RBP8□□□□□ -1.13
KLHL28-203ENST00000553817 MFSD10Q14728 455 aa7.98□□□□□ -1.13
KLHL28-203ENST00000553817 GPHNQ9NQX3 736 aaPredicted RBP7.98□□□□□ -1.13
KLHL28-203ENST00000553817 TMC2Q8TDI7 906 aa7.97□□□□□ -1.13
KLHL28-203ENST00000553817 P3H3Q8IVL6 736 aa7.96□□□□□ -1.14
KLHL28-203ENST00000553817 DDX27Q96GQ7 796 aaKnown RBP7.96□□□□□ -1.14
KLHL28-203ENST00000553817 BCANQ96GW7 911 aa7.96□□□□□ -1.14
KLHL28-203ENST00000553817 E2F4Q16254 413 aa7.94□□□□□ -1.14
KLHL28-203ENST00000553817 C3orf67Q6ZVT6 689 aa7.94□□□□□ -1.14
KLHL28-203ENST00000553817 C2orf72A6NCS6 295 aa7.93□□□□□ -1.14
KLHL28-203ENST00000553817 KIF3CO14782 793 aa7.93□□□□□ -1.14
KLHL28-203ENST00000553817 PPP1R15BQ5SWA1 713 aa7.93□□□□□ -1.14
KLHL28-203ENST00000553817 FOXK1P85037 733 aa7.92□□□□□ -1.14
KLHL28-203ENST00000553817 TMEM92Q6UXU6 159 aa7.92□□□□□ -1.14
KLHL28-203ENST00000553817 KCNV2Q8TDN2 545 aa7.92□□□□□ -1.14
KLHL28-203ENST00000553817 DSG2Q14126 1118 aa7.91□□□□□ -1.14
KLHL28-203ENST00000553817 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.91□□□□□ -1.14
KLHL28-203ENST00000553817 NBR1Q14596 966 aa7.9□□□□□ -1.14
KLHL28-203ENST00000553817 POTEB2H3BUK9 544 aa7.89□□□□□ -1.15
KLHL28-203ENST00000553817 CAMK2BQ13554 666 aa7.89□□□□□ -1.15
KLHL28-203ENST00000553817 PLPP6Q8IY26 295 aa7.89□□□□□ -1.15
KLHL28-203ENST00000553817 ARHGEF1Q92888 912 aaKnown RBP7.89□□□□□ -1.15
KLHL28-203ENST00000553817 POTEJP0CG39 1038 aa7.87□□□□□ -1.15
KLHL28-203ENST00000553817 MAMSTRQ6ZN01 415 aa7.86□□□□□ -1.15
KLHL28-203ENST00000553817 ARIH1Q9Y4X5 557 aaPredicted RBP7.86□□□□□ -1.15
KLHL28-203ENST00000553817 SCUBE2Q9NQ36 999 aa7.84□□□□□ -1.15
KLHL28-203ENST00000553817 EMILIN3Q9NT22 766 aa7.82□□□□□ -1.16
KLHL28-203ENST00000553817 SLAIN1Q8ND83 568 aa7.8□□□□□ -1.16
KLHL28-203ENST00000553817 DPYSL4O14531 572 aa7.79□□□□□ -1.16
KLHL28-203ENST00000553817 SLC34A2O95436 690 aa7.78□□□□□ -1.16
KLHL28-203ENST00000553817 MAP3K9P80192 1104 aa7.78□□□□□ -1.16
KLHL28-203ENST00000553817 OXER1Q8TDS5 423 aa7.78□□□□□ -1.16
KLHL28-203ENST00000553817 UPF1Q92900 1129 aaKnown RBP eCLIP7.78□□□□□ -1.16
KLHL28-203ENST00000553817 SPDYE16A6NNV3 312 aaPredicted RBP7.77□□□□□ -1.17
KLHL28-203ENST00000553817 SEMA3EO15041 775 aa7.76□□□□□ -1.17
KLHL28-203ENST00000553817 LHX8Q68G74 356 aa7.76□□□□□ -1.17
KLHL28-203ENST00000553817 PTCD2Q8WV60 388 aaKnown RBP7.76□□□□□ -1.17
KLHL28-203ENST00000553817 TESPA1A2RU30 521 aaPredicted RBP7.75□□□□□ -1.17
KLHL28-203ENST00000553817 TBC1D12O60347 775 aa7.75□□□□□ -1.17
KLHL28-203ENST00000553817 PDIA6Q15084 440 aa7.75□□□□□ -1.17
KLHL28-203ENST00000553817 TULP1O00294 542 aaPredicted RBP7.73□□□□□ -1.17
KLHL28-203ENST00000553817 DOK7Q18PE1 504 aa7.73□□□□□ -1.17
KLHL28-203ENST00000553817 OTUD5Q96G74 571 aa7.73□□□□□ -1.17
KLHL28-203ENST00000553817 SMYD5Q6GMV2 418 aa7.72□□□□□ -1.17
KLHL28-203ENST00000553817 HOXB3P14651 431 aaPredicted RBP7.71□□□□□ -1.18
KLHL28-203ENST00000553817 PCDHGA4Q9Y5G9 962 aa7.71□□□□□ -1.18
KLHL28-203ENST00000553817 ZNF316A6NFI3 1004 aaPredicted RBP7.7□□□□□ -1.18
KLHL28-203ENST00000553817 RIMBP2O15034 1052 aa7.7□□□□□ -1.18
KLHL28-203ENST00000553817 SNPHO15079 494 aa7.7□□□□□ -1.18
KLHL28-203ENST00000553817 EVI5O60447 810 aa7.7□□□□□ -1.18
KLHL28-203ENST00000553817 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.7□□□□□ -1.18
KLHL28-203ENST00000553817 MLLT3P42568 568 aaPredicted RBP7.69□□□□□ -1.18
KLHL28-203ENST00000553817 LMOD2Q6P5Q4 547 aa7.68□□□□□ -1.18
KLHL28-203ENST00000553817 ZNF710Q8N1W2 664 aa7.68□□□□□ -1.18
KLHL28-203ENST00000553817 ZSWIM6Q9HCJ5 1215 aa7.68□□□□□ -1.18
KLHL28-203ENST00000553817 PTGER2P43116 358 aa7.67□□□□□ -1.18
KLHL28-203ENST00000553817 ANO8Q9HCE9 1232 aaPredicted RBP7.67□□□□□ -1.18
KLHL28-203ENST00000553817 TPRNQ4KMQ1 711 aa7.66□□□□□ -1.18
KLHL28-203ENST00000553817 GRXCR2A6NFK2 248 aa7.65□□□□□ -1.18
KLHL28-203ENST00000553817 ARSIQ5FYB1 569 aa7.65□□□□□ -1.18
KLHL28-203ENST00000553817 GPR153Q6NV75 609 aa7.65□□□□□ -1.18
KLHL28-203ENST00000553817 KDM4FA0A1W2PPD8 638 aa7.64□□□□□ -1.19
KLHL28-203ENST00000553817 DDX12PQ92771 950 aa7.64□□□□□ -1.19
KLHL28-203ENST00000553817 KHSRPQ92945 711 aaKnown RBP eCLIP7.63□□□□□ -1.19
KLHL28-203ENST00000553817 NUDT7P0C024 238 aa7.62□□□□□ -1.19
KLHL28-203ENST00000553817 PRKCSHP14314 528 aaPredicted RBP7.62□□□□□ -1.19
KLHL28-203ENST00000553817 OSBPP22059 807 aa7.61□□□□□ -1.19
KLHL28-203ENST00000553817 RBM26Q5T8P6 1007 aaKnown RBP7.61□□□□□ -1.19
KLHL28-203ENST00000553817 PHF14O94880 888 aa7.6□□□□□ -1.19
KLHL28-203ENST00000553817 HOXB1P14653 301 aaPredicted RBP7.6□□□□□ -1.19
KLHL28-203ENST00000553817 EPAS1Q99814 870 aa7.6□□□□□ -1.19
KLHL28-203ENST00000553817 JPH4Q96JJ6 628 aa7.59□□□□□ -1.19
KLHL28-203ENST00000553817 FOSBP53539 338 aa7.58□□□□□ -1.2
KLHL28-203ENST00000553817 TYW1BQ6NUM6 668 aa7.58□□□□□ -1.2
KLHL28-203ENST00000553817 PCDHGA10Q9Y5H3 936 aa7.58□□□□□ -1.2
KLHL28-203ENST00000553817 GPIHBP1Q8IV16 184 aa7.57□□□□□ -1.2
KLHL28-203ENST00000553817 ZC3H15Q8WU90 426 aaKnown RBP7.57□□□□□ -1.2
KLHL28-203ENST00000553817 PSDA5PKW4 1024 aaPredicted RBP7.56□□□□□ -1.2
KLHL28-203ENST00000553817 ZNF454Q8N9F8 522 aa7.56□□□□□ -1.2
KLHL28-203ENST00000553817 FBXW7Q969H0 707 aa7.56□□□□□ -1.2
KLHL28-203ENST00000553817 LHX6Q9UPM6 363 aa7.56□□□□□ -1.2
KLHL28-203ENST00000553817 NUTM2FA1L443 756 aa7.55□□□□□ -1.2
KLHL28-203ENST00000553817 PRIM1P49642 420 aaKnown RBP7.55□□□□□ -1.2
KLHL28-203ENST00000553817 EN1Q05925 392 aaPredicted RBP7.55□□□□□ -1.2
KLHL28-203ENST00000553817 ZDHHC16Q969W1 377 aa7.54□□□□□ -1.2
KLHL28-203ENST00000553817 MAP3K7O43318 606 aa7.53□□□□□ -1.2
KLHL28-203ENST00000553817 ST18O60284 1047 aa7.53□□□□□ -1.2
KLHL28-203ENST00000553817 RBM33Q96EV2 1170 aaKnown RBP7.53□□□□□ -1.2
KLHL28-203ENST00000553817 ZMYND10O75800 440 aa7.52□□□□□ -1.21
KLHL28-203ENST00000553817 PPP4R3BQ5MIZ7 849 aa7.52□□□□□ -1.21
KLHL28-203ENST00000553817 FAM163AQ96GL9 167 aaPredicted RBP7.52□□□□□ -1.21
KLHL28-203ENST00000553817 GPR37O15354 613 aa7.51□□□□□ -1.21
KLHL28-203ENST00000553817 FCHSD2O94868 740 aa7.51□□□□□ -1.21
KLHL28-203ENST00000553817 BARGINQ6ZT62 677 aa7.5□□□□□ -1.21
KLHL28-203ENST00000553817 ADAM33Q9BZ11 813 aa7.5□□□□□ -1.21
KLHL28-203ENST00000553817 PTGDRQ13258 359 aa7.49□□□□□ -1.21
KLHL28-203ENST00000553817 HIC1Q14526 733 aa7.49□□□□□ -1.21
KLHL28-203ENST00000553817 TSR1Q2NL82 804 aaKnown RBP7.49□□□□□ -1.21
KLHL28-203ENST00000553817 C6orf132Q5T0Z8 1188 aa7.49□□□□□ -1.21
KLHL28-203ENST00000553817 CDHR5Q9HBB8 845 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms