RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 CAMSAP2Q08AD1 1489 aa21.25■□□□□ 0.99
ABCD4-219ENST00000553745 CFDP1Q9UEE9 299 aaPredicted RBP21.23■□□□□ 0.99
ABCD4-219ENST00000553745 ARHGAP5Q13017 1502 aa21.23■□□□□ 0.99
ABCD4-219ENST00000553745 SAMD9LQ8IVG5 1584 aa21.22■□□□□ 0.99
ABCD4-219ENST00000553745 ITGAEP38570 1179 aa21.21■□□□□ 0.99
ABCD4-219ENST00000553745 ZNF644Q9H582 1327 aaPredicted RBP21.21■□□□□ 0.99
ABCD4-219ENST00000553745 DNMT1P26358 1616 aaKnown RBP21.2■□□□□ 0.98
ABCD4-219ENST00000553745 PLCH2O75038 1416 aa21.19■□□□□ 0.98
ABCD4-219ENST00000553745 ARAP3Q8WWN8 1544 aa21.19■□□□□ 0.98
ABCD4-219ENST00000553745 DIP2BQ9P265 1576 aa21.17■□□□□ 0.98
ABCD4-219ENST00000553745 CROCC2H7BZ55 1655 aa21.17■□□□□ 0.98
ABCD4-219ENST00000553745 ZNF777Q9ULD5 760 aaPredicted RBP21.17■□□□□ 0.98
ABCD4-219ENST00000553745 DNAJC5Q9H3Z4 198 aa21.16■□□□□ 0.98
ABCD4-219ENST00000553745 PTPRKQ15262 1439 aa21.15■□□□□ 0.98
ABCD4-219ENST00000553745 MAP3K4Q9Y6R4 1608 aa21.14■□□□□ 0.97
ABCD4-219ENST00000553745 DAPK1P53355 1430 aa21.14■□□□□ 0.97
ABCD4-219ENST00000553745 GLI2P10070 1586 aa21.14■□□□□ 0.97
ABCD4-219ENST00000553745 SYCP2Q9BX26 1530 aa21.13■□□□□ 0.97
ABCD4-219ENST00000553745 ABCC1P33527 1531 aa21.11■□□□□ 0.97
ABCD4-219ENST00000553745 ARHGEF5Q12774 1597 aa21.11■□□□□ 0.97
ABCD4-219ENST00000553745 ABCC5O15440 1437 aa21.11■□□□□ 0.97
ABCD4-219ENST00000553745 KIF13AQ9H1H9 1805 aa21.1■□□□□ 0.97
ABCD4-219ENST00000553745 CD109Q6YHK3 1445 aa21.09■□□□□ 0.97
ABCD4-219ENST00000553745 FANCAO15360 1455 aa21.09■□□□□ 0.97
ABCD4-219ENST00000553745 ADGBQ8N7X0 1667 aa21.08■□□□□ 0.97
ABCD4-219ENST00000553745 MBD5Q9P267 1494 aa21.08■□□□□ 0.97
ABCD4-219ENST00000553745 CFAP74Q9C0B2 1584 aa21.08■□□□□ 0.96
ABCD4-219ENST00000553745 PLEKHH2Q8IVE3 1493 aa21.07■□□□□ 0.96
ABCD4-219ENST00000553745 EFCAB2Q5VUJ9 269 aa21.06■□□□□ 0.96
ABCD4-219ENST00000553745 ARHGEF12Q9NZN5 1544 aa21.06■□□□□ 0.96
ABCD4-219ENST00000553745 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
ABCD4-219ENST00000553745 CCDC141Q6ZP82 1450 aa21.05■□□□□ 0.96
ABCD4-219ENST00000553745 KIAA1107Q9UPP5 1409 aa21.04■□□□□ 0.96
ABCD4-219ENST00000553745 SHANK2Q9UPX8 1470 aa21.04■□□□□ 0.96
ABCD4-219ENST00000553745 TSPOAP1O95153 1857 aa21.03■□□□□ 0.96
ABCD4-219ENST00000553745 HNRNPMP52272 730 aaKnown RBP eCLIP21.02■□□□□ 0.96
ABCD4-219ENST00000553745 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
ABCD4-219ENST00000553745 PPRC1Q5VV67 1664 aaKnown RBP21.02■□□□□ 0.96
ABCD4-219ENST00000553745 FAM69CQ0P6D2 419 aa21.02■□□□□ 0.96
ABCD4-219ENST00000553745 AKNAQ7Z591 1439 aa21.02■□□□□ 0.95
ABCD4-219ENST00000553745 CHIC2Q9UKJ5 165 aa21.01■□□□□ 0.95
ABCD4-219ENST00000553745 HFM1A2PYH4 1435 aa21.01■□□□□ 0.95
ABCD4-219ENST00000553745 ADGRL1O94910 1474 aa21.01■□□□□ 0.95
ABCD4-219ENST00000553745 ADGRL2O95490 1459 aa20.99■□□□□ 0.95
ABCD4-219ENST00000553745 C9orf84Q5VXU9 1444 aa20.99■□□□□ 0.95
ABCD4-219ENST00000553745 SETD5Q9C0A6 1442 aa20.99■□□□□ 0.95
ABCD4-219ENST00000553745 MAST1Q9Y2H9 1570 aa20.99■□□□□ 0.95
ABCD4-219ENST00000553745 NAIPQ13075 1403 aa20.98■□□□□ 0.95
ABCD4-219ENST00000553745 ROCK1Q13464 1354 aa20.97■□□□□ 0.95
ABCD4-219ENST00000553745 RAB3GAP2Q9H2M9 1393 aa20.97■□□□□ 0.95
ABCD4-219ENST00000553745 TRAPPC8Q9Y2L5 1435 aa20.96■□□□□ 0.95
ABCD4-219ENST00000553745 NEO1Q92859 1461 aa20.96■□□□□ 0.95
ABCD4-219ENST00000553745 RRP7BPQ9NSQ0 103 aa20.95■□□□□ 0.94
ABCD4-219ENST00000553745 SCAPERQ9BY12 1400 aa20.94■□□□□ 0.94
ABCD4-219ENST00000553745 KDM6BO15054 1643 aa20.94■□□□□ 0.94
ABCD4-219ENST00000553745 RSPH4AQ5TD94 716 aa20.93■□□□□ 0.94
ABCD4-219ENST00000553745 NCOA1Q15788 1441 aa20.93■□□□□ 0.94
ABCD4-219ENST00000553745 PLXNC1O60486 1568 aa20.92■□□□□ 0.94
ABCD4-219ENST00000553745 TSPY4P0CV99 314 aa20.91■□□□□ 0.94
ABCD4-219ENST00000553745 TSPY10P0CW01 314 aa20.91■□□□□ 0.94
ABCD4-219ENST00000553745 ZFYVE16Q7Z3T8 1539 aa20.91■□□□□ 0.94
ABCD4-219ENST00000553745 INO80Q9ULG1 1556 aaPredicted RBP20.9■□□□□ 0.94
ABCD4-219ENST00000553745 ANKRD30AQ9BXX3 1397 aa20.9■□□□□ 0.94
ABCD4-219ENST00000553745 TEX14Q8IWB6 1497 aa20.89■□□□□ 0.94
ABCD4-219ENST00000553745 POGZQ7Z3K3 1410 aa20.88■□□□□ 0.93
ABCD4-219ENST00000553745 RICTORQ6R327 1708 aa20.88■□□□□ 0.93
ABCD4-219ENST00000553745 KDM5CP41229 1560 aa20.88■□□□□ 0.93
ABCD4-219ENST00000553745 ZNF518AQ6AHZ1 1483 aa20.88■□□□□ 0.93
ABCD4-219ENST00000553745 AFAP1Q8N556 730 aa20.86■□□□□ 0.93
ABCD4-219ENST00000553745 ATP7AQ04656 1500 aa20.86■□□□□ 0.93
ABCD4-219ENST00000553745 KIF15Q9NS87 1388 aa20.85■□□□□ 0.93
ABCD4-219ENST00000553745 DENND4BO75064 1496 aaPredicted RBP20.84■□□□□ 0.93
ABCD4-219ENST00000553745 KIDINS220Q9ULH0 1771 aa20.83■□□□□ 0.93
ABCD4-219ENST00000553745 FRMPD1Q5SYB0 1578 aa20.83■□□□□ 0.93
ABCD4-219ENST00000553745 HECW2Q9P2P5 1572 aa20.83■□□□□ 0.92
ABCD4-219ENST00000553745 SPAG9O60271 1321 aaKnown RBP20.83■□□□□ 0.92
ABCD4-219ENST00000553745 RTEL1-TNFRSF6BF6WH68 1400 aa20.82■□□□□ 0.92
ABCD4-219ENST00000553745 DHX57Q6P158 1386 aaKnown RBP20.81■□□□□ 0.92
ABCD4-219ENST00000553745 ANKRD50Q9ULJ7 1429 aa20.8■□□□□ 0.92
ABCD4-219ENST00000553745 DUOX2Q9NRD8 1548 aa20.79■□□□□ 0.92
ABCD4-219ENST00000553745 ABCA6Q8N139 1617 aa20.76■□□□□ 0.91
ABCD4-219ENST00000553745 RAPGEF3O95398 923 aa20.76■□□□□ 0.91
ABCD4-219ENST00000553745 MLH3Q9UHC1 1453 aa20.76■□□□□ 0.91
ABCD4-219ENST00000553745 ZMYM4Q5VZL5 1548 aa20.75■□□□□ 0.91
ABCD4-219ENST00000553745 TRHP20396 242 aaPredicted RBP20.74■□□□□ 0.91
ABCD4-219ENST00000553745 ERBINQ96RT1 1412 aa20.73■□□□□ 0.91
ABCD4-219ENST00000553745 MYT1LQ9UL68 1186 aa20.72■□□□□ 0.91
ABCD4-219ENST00000553745 DIP2CQ9Y2E4 1556 aa20.71■□□□□ 0.91
ABCD4-219ENST00000553745 COL17A1Q9UMD9 1497 aaPredicted RBP20.71■□□□□ 0.91
ABCD4-219ENST00000553745 UNC13BO14795 1591 aa20.71■□□□□ 0.91
ABCD4-219ENST00000553745 EIF2AK4Q9P2K8 1649 aaKnown RBP20.69■□□□□ 0.9
ABCD4-219ENST00000553745 TRIM52Q96A61 297 aa20.68■□□□□ 0.9
ABCD4-219ENST00000553745 KDM5DQ9BY66 1539 aa20.67■□□□□ 0.9
ABCD4-219ENST00000553745 YEATS2Q9ULM3 1422 aa20.66■□□□□ 0.9
ABCD4-219ENST00000553745 DEPDC5O75140 1603 aa20.66■□□□□ 0.9
ABCD4-219ENST00000553745 A2MP01023 1474 aa20.65■□□□□ 0.9
ABCD4-219ENST00000553745 PZPP20742 1482 aa20.65■□□□□ 0.9
ABCD4-219ENST00000553745 MAGI2Q86UL8 1455 aa20.65■□□□□ 0.9
ABCD4-219ENST00000553745 ACIN1Q9UKV3 1341 aaKnown RBP20.64■□□□□ 0.89
ABCD4-219ENST00000553745 DHX29Q7Z478 1369 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms