RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 CFAP74Q9C0B2 1584 aa12.61□□□□□ -0.39
SNRPN-206ENST00000553597 LRRC9Q6ZRR7 1453 aa12.61□□□□□ -0.39
SNRPN-206ENST00000553597 ARHGAP5Q13017 1502 aa12.6□□□□□ -0.39
SNRPN-206ENST00000553597 TEX14Q8IWB6 1497 aa12.59□□□□□ -0.39
SNRPN-206ENST00000553597 PPARGC1BQ86YN6 1023 aaKnown RBP12.59□□□□□ -0.39
SNRPN-206ENST00000553597 MAP3K1Q13233 1512 aa12.58□□□□□ -0.4
SNRPN-206ENST00000553597 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.4
SNRPN-206ENST00000553597 NCOA2Q15596 1464 aa12.58□□□□□ -0.4
SNRPN-206ENST00000553597 FANCAO15360 1455 aa12.56□□□□□ -0.4
SNRPN-206ENST00000553597 SAMD9LQ8IVG5 1584 aa12.54□□□□□ -0.4
SNRPN-206ENST00000553597 CCNB3Q8WWL7 1395 aa12.54□□□□□ -0.4
SNRPN-206ENST00000553597 RICTORQ6R327 1708 aa12.53□□□□□ -0.4
SNRPN-206ENST00000553597 ZNF777Q9ULD5 760 aaPredicted RBP12.52□□□□□ -0.41
SNRPN-206ENST00000553597 PLCH2O75038 1416 aa12.52□□□□□ -0.41
SNRPN-206ENST00000553597 GPATCH8Q9UKJ3 1502 aaKnown RBP12.52□□□□□ -0.41
SNRPN-206ENST00000553597 FRMPD1Q5SYB0 1578 aa12.52□□□□□ -0.41
SNRPN-206ENST00000553597 ADGRL1O94910 1474 aa12.51□□□□□ -0.41
SNRPN-206ENST00000553597 NEO1Q92859 1461 aa12.51□□□□□ -0.41
SNRPN-206ENST00000553597 ARAP3Q8WWN8 1544 aa12.51□□□□□ -0.41
SNRPN-206ENST00000553597 AKNAQ7Z591 1439 aa12.5□□□□□ -0.41
SNRPN-206ENST00000553597 ABCC1P33527 1531 aa12.5□□□□□ -0.41
SNRPN-206ENST00000553597 SYCP2Q9BX26 1530 aa12.5□□□□□ -0.41
SNRPN-206ENST00000553597 COL17A1Q9UMD9 1497 aaPredicted RBP12.49□□□□□ -0.41
SNRPN-206ENST00000553597 CAMSAP2Q08AD1 1489 aa12.47□□□□□ -0.41
SNRPN-206ENST00000553597 PHLDB1Q86UU1 1377 aa12.47□□□□□ -0.41
SNRPN-206ENST00000553597 PTPN23Q9H3S7 1636 aa12.47□□□□□ -0.41
SNRPN-206ENST00000553597 MYOM3Q5VTT5 1437 aa12.46□□□□□ -0.41
SNRPN-206ENST00000553597 EFCAB2Q5VUJ9 269 aa12.46□□□□□ -0.41
SNRPN-206ENST00000553597 CFDP1Q9UEE9 299 aaPredicted RBP12.46□□□□□ -0.41
SNRPN-206ENST00000553597 SCAPERQ9BY12 1400 aa12.45□□□□□ -0.42
SNRPN-206ENST00000553597 DENND4BO75064 1496 aaPredicted RBP12.45□□□□□ -0.42
SNRPN-206ENST00000553597 ZNF644Q9H582 1327 aaPredicted RBP12.44□□□□□ -0.42
SNRPN-206ENST00000553597 ARHGEF12Q9NZN5 1544 aa12.44□□□□□ -0.42
SNRPN-206ENST00000553597 RAPGEF3O95398 923 aa12.44□□□□□ -0.42
SNRPN-206ENST00000553597 CROCC2H7BZ55 1655 aa12.44□□□□□ -0.42
SNRPN-206ENST00000553597 HECW2Q9P2P5 1572 aa12.43□□□□□ -0.42
SNRPN-206ENST00000553597 POGZQ7Z3K3 1410 aa12.43□□□□□ -0.42
SNRPN-206ENST00000553597 FGD6Q6ZV73 1430 aa12.42□□□□□ -0.42
SNRPN-206ENST00000553597 TRAPPC8Q9Y2L5 1435 aa12.42□□□□□ -0.42
SNRPN-206ENST00000553597 HNRNPMP52272 730 aaKnown RBP eCLIP12.41□□□□□ -0.426e-7■□□□□ 9.7
SNRPN-206ENST00000553597 MYT1LQ9UL68 1186 aa12.41□□□□□ -0.42
SNRPN-206ENST00000553597 ZMYM4Q5VZL5 1548 aa12.41□□□□□ -0.42
SNRPN-206ENST00000553597 ARHGEF40Q8TER5 1519 aa12.41□□□□□ -0.42
SNRPN-206ENST00000553597 ABCA6Q8N139 1617 aa12.4□□□□□ -0.42
SNRPN-206ENST00000553597 ZNF518AQ6AHZ1 1483 aa12.4□□□□□ -0.42
SNRPN-206ENST00000553597 PLEKHH2Q8IVE3 1493 aa12.4□□□□□ -0.42
SNRPN-206ENST00000553597 KDM5CP41229 1560 aa12.4□□□□□ -0.42
SNRPN-206ENST00000553597 ZFYVE16Q7Z3T8 1539 aa12.4□□□□□ -0.42
SNRPN-206ENST00000553597 KIDINS220Q9ULH0 1771 aa12.4□□□□□ -0.42
SNRPN-206ENST00000553597 INO80Q9ULG1 1556 aaPredicted RBP12.39□□□□□ -0.43
SNRPN-206ENST00000553597 ADGBQ8N7X0 1667 aa12.38□□□□□ -0.43
SNRPN-206ENST00000553597 DNMT1P26358 1616 aaKnown RBP12.38□□□□□ -0.43
SNRPN-206ENST00000553597 SIGLEC1Q9BZZ2 1709 aa12.38□□□□□ -0.43
SNRPN-206ENST00000553597 FAM50AQ14320 339 aaKnown RBP12.38□□□□□ -0.43
SNRPN-206ENST00000553597 ARHGEF5Q12774 1597 aa12.38□□□□□ -0.43
SNRPN-206ENST00000553597 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
SNRPN-206ENST00000553597 YEATS2Q9ULM3 1422 aa12.37□□□□□ -0.43
SNRPN-206ENST00000553597 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
SNRPN-206ENST00000553597 AFAP1Q8N556 730 aa12.37□□□□□ -0.43
SNRPN-206ENST00000553597 DIP2CQ9Y2E4 1556 aa12.36□□□□□ -0.43
SNRPN-206ENST00000553597 CCDC141Q6ZP82 1450 aa12.36□□□□□ -0.43
SNRPN-206ENST00000553597 TCOF1Q13428 1488 aaKnown RBP12.35□□□□□ -0.43
SNRPN-206ENST00000553597 MBD5Q9P267 1494 aa12.34□□□□□ -0.43
SNRPN-206ENST00000553597 KIAA1107Q9UPP5 1409 aa12.34□□□□□ -0.43
SNRPN-206ENST00000553597 DAPK1P53355 1430 aa12.32□□□□□ -0.44
SNRPN-206ENST00000553597 ITGAEP38570 1179 aa12.32□□□□□ -0.44
SNRPN-206ENST00000553597 SPAG9O60271 1321 aaKnown RBP12.32□□□□□ -0.44
SNRPN-206ENST00000553597 MAST1Q9Y2H9 1570 aa12.3□□□□□ -0.44
SNRPN-206ENST00000553597 C9orf84Q5VXU9 1444 aa12.3□□□□□ -0.44
SNRPN-206ENST00000553597 MAGI2Q86UL8 1455 aa12.29□□□□□ -0.44
SNRPN-206ENST00000553597 MLH3Q9UHC1 1453 aa12.29□□□□□ -0.44
SNRPN-206ENST00000553597 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
SNRPN-206ENST00000553597 PLXNC1O60486 1568 aa12.29□□□□□ -0.44
SNRPN-206ENST00000553597 ABCC5O15440 1437 aa12.28□□□□□ -0.44
SNRPN-206ENST00000553597 ARID4BQ4LE39 1312 aaPredicted RBP12.28□□□□□ -0.44
SNRPN-206ENST00000553597 BCORL1Q5H9F3 1711 aa12.28□□□□□ -0.44
SNRPN-206ENST00000553597 FER1L4A9Z1Z3 1794 aa12.28□□□□□ -0.44
SNRPN-206ENST00000553597 RRBP1Q9P2E9 1410 aaKnown RBP12.28□□□□□ -0.44
SNRPN-206ENST00000553597 ATP10AO60312 1499 aa12.27□□□□□ -0.44
SNRPN-206ENST00000553597 SHANK2Q9UPX8 1470 aa12.27□□□□□ -0.45
SNRPN-206ENST00000553597 RIMS1Q86UR5 1692 aaKnown RBP12.26□□□□□ -0.45
SNRPN-206ENST00000553597 MADDQ8WXG6 1647 aa12.26□□□□□ -0.45
SNRPN-206ENST00000553597 TSPY4P0CV99 314 aa12.25□□□□□ -0.45
SNRPN-206ENST00000553597 TSPY10P0CW01 314 aa12.25□□□□□ -0.45
SNRPN-206ENST00000553597 MLECQ14165 292 aa12.25□□□□□ -0.45
SNRPN-206ENST00000553597 A2MP01023 1474 aa12.24□□□□□ -0.45
SNRPN-206ENST00000553597 PTPRKQ15262 1439 aa12.24□□□□□ -0.45
SNRPN-206ENST00000553597 REREQ9P2R6 1566 aa12.24□□□□□ -0.45
SNRPN-206ENST00000553597 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
SNRPN-206ENST00000553597 GCC2Q8IWJ2 1684 aa12.22□□□□□ -0.45
SNRPN-206ENST00000553597 CEP152O94986 1710 aa12.22□□□□□ -0.45
SNRPN-206ENST00000553597 ADAMTSL3P82987 1691 aa12.22□□□□□ -0.45
SNRPN-206ENST00000553597 CLTCQ00610 1675 aaKnown RBP12.22□□□□□ -0.45
SNRPN-206ENST00000553597 KIF15Q9NS87 1388 aa12.21□□□□□ -0.45
SNRPN-206ENST00000553597 RSPH4AQ5TD94 716 aa12.21□□□□□ -0.45
SNRPN-206ENST00000553597 RRP7BPQ9NSQ0 103 aa12.21□□□□□ -0.45
SNRPN-206ENST00000553597 EIF2AK4Q9P2K8 1649 aaKnown RBP12.21□□□□□ -0.46
SNRPN-206ENST00000553597 DUOX2Q9NRD8 1548 aa12.21□□□□□ -0.46
SNRPN-206ENST00000553597 ADGRL2O95490 1459 aa12.2□□□□□ -0.46
SNRPN-206ENST00000553597 ANKRD30AQ9BXX3 1397 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms