RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 FANCAO15360 1455 aa18.64■□□□□ 0.57
TRAFD1-209ENST00000552896 RICTORQ6R327 1708 aa18.63■□□□□ 0.57
TRAFD1-209ENST00000552896 PLCH2O75038 1416 aa18.62■□□□□ 0.57
TRAFD1-209ENST00000552896 COL17A1Q9UMD9 1497 aaPredicted RBP18.62■□□□□ 0.57
TRAFD1-209ENST00000552896 FRMPD1Q5SYB0 1578 aa18.61■□□□□ 0.57
TRAFD1-209ENST00000552896 MTUS2Q5JR59 1369 aa18.61■□□□□ 0.57
TRAFD1-209ENST00000552896 MSH5O43196 834 aa18.6■□□□□ 0.57
TRAFD1-209ENST00000552896 ARHGAP5Q13017 1502 aa18.59■□□□□ 0.57
TRAFD1-209ENST00000552896 LRRC9Q6ZRR7 1453 aa18.56■□□□□ 0.56
TRAFD1-209ENST00000552896 AKNAQ7Z591 1439 aa18.56■□□□□ 0.56
TRAFD1-209ENST00000552896 ABCC1P33527 1531 aa18.54■□□□□ 0.56
TRAFD1-209ENST00000552896 ZMYM4Q5VZL5 1548 aa18.54■□□□□ 0.56
TRAFD1-209ENST00000552896 ADGRL1O94910 1474 aa18.54■□□□□ 0.56
TRAFD1-209ENST00000552896 SAMD9LQ8IVG5 1584 aa18.52■□□□□ 0.56
TRAFD1-209ENST00000552896 GPATCH8Q9UKJ3 1502 aaKnown RBP18.52■□□□□ 0.56
TRAFD1-209ENST00000552896 DENND4BO75064 1496 aaPredicted RBP18.52■□□□□ 0.55
TRAFD1-209ENST00000552896 NCOA2Q15596 1464 aa18.52■□□□□ 0.55
TRAFD1-209ENST00000552896 ARHGEF40Q8TER5 1519 aa18.5■□□□□ 0.55
TRAFD1-209ENST00000552896 POGZQ7Z3K3 1410 aa18.49■□□□□ 0.55
TRAFD1-209ENST00000552896 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
TRAFD1-209ENST00000552896 KDM5CP41229 1560 aa18.49■□□□□ 0.55
TRAFD1-209ENST00000552896 EFCAB2Q5VUJ9 269 aa18.47■□□□□ 0.55
TRAFD1-209ENST00000552896 PIAS4Q8N2W9 510 aaPredicted RBP18.46■□□□□ 0.55
TRAFD1-209ENST00000552896 ZNF518AQ6AHZ1 1483 aa18.46■□□□□ 0.54
TRAFD1-209ENST00000552896 SYCP2Q9BX26 1530 aa18.45■□□□□ 0.54
TRAFD1-209ENST00000552896 SCAPERQ9BY12 1400 aa18.45■□□□□ 0.54
TRAFD1-209ENST00000552896 HECW2Q9P2P5 1572 aa18.45■□□□□ 0.54
TRAFD1-209ENST00000552896 PLEKHH2Q8IVE3 1493 aa18.44■□□□□ 0.54
TRAFD1-209ENST00000552896 ZFYVE16Q7Z3T8 1539 aa18.43■□□□□ 0.54
TRAFD1-209ENST00000552896 MAGI2Q86UL8 1455 aa18.42■□□□□ 0.54
TRAFD1-209ENST00000552896 APLP2Q06481 763 aa18.42■□□□□ 0.54
TRAFD1-209ENST00000552896 ARHGEF12Q9NZN5 1544 aa18.41■□□□□ 0.54
TRAFD1-209ENST00000552896 RAPGEF3O95398 923 aa18.4■□□□□ 0.54
TRAFD1-209ENST00000552896 KANK4Q5T7N3 995 aaPredicted RBP18.39■□□□□ 0.53
TRAFD1-209ENST00000552896 KIAA1107Q9UPP5 1409 aa18.39■□□□□ 0.53
TRAFD1-209ENST00000552896 CAMSAP2Q08AD1 1489 aa18.39■□□□□ 0.53
TRAFD1-209ENST00000552896 MYOM3Q5VTT5 1437 aa18.38■□□□□ 0.53
TRAFD1-209ENST00000552896 INO80Q9ULG1 1556 aaPredicted RBP18.38■□□□□ 0.53
TRAFD1-209ENST00000552896 CFDP1Q9UEE9 299 aaPredicted RBP18.37■□□□□ 0.53
TRAFD1-209ENST00000552896 ABCA6Q8N139 1617 aa18.37■□□□□ 0.53
TRAFD1-209ENST00000552896 KIDINS220Q9ULH0 1771 aa18.37■□□□□ 0.53
TRAFD1-209ENST00000552896 ARHGEF5Q12774 1597 aa18.35■□□□□ 0.53
TRAFD1-209ENST00000552896 DIP2CQ9Y2E4 1556 aa18.35■□□□□ 0.53
TRAFD1-209ENST00000552896 TRAPPC8Q9Y2L5 1435 aa18.35■□□□□ 0.53
TRAFD1-209ENST00000552896 SIGLEC1Q9BZZ2 1709 aa18.35■□□□□ 0.53
TRAFD1-209ENST00000552896 MLH3Q9UHC1 1453 aa18.34■□□□□ 0.53
TRAFD1-209ENST00000552896 MIA2Q96PC5 1412 aa18.34■□□□□ 0.53
TRAFD1-209ENST00000552896 CROCC2H7BZ55 1655 aa18.34■□□□□ 0.53
TRAFD1-209ENST00000552896 REREQ9P2R6 1566 aa18.34■□□□□ 0.53
TRAFD1-209ENST00000552896 PTPN23Q9H3S7 1636 aa18.33■□□□□ 0.52
TRAFD1-209ENST00000552896 YEATS2Q9ULM3 1422 aa18.32■□□□□ 0.52
TRAFD1-209ENST00000552896 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
TRAFD1-209ENST00000552896 BCORL1Q5H9F3 1711 aa18.32■□□□□ 0.52
TRAFD1-209ENST00000552896 ZNF777Q9ULD5 760 aaPredicted RBP18.31■□□□□ 0.52
TRAFD1-209ENST00000552896 MBD5Q9P267 1494 aa18.31■□□□□ 0.52
TRAFD1-209ENST00000552896 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
TRAFD1-209ENST00000552896 CCDC141Q6ZP82 1450 aa18.3■□□□□ 0.52
TRAFD1-209ENST00000552896 ADGBQ8N7X0 1667 aa18.3■□□□□ 0.52
TRAFD1-209ENST00000552896 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
TRAFD1-209ENST00000552896 C9orf84Q5VXU9 1444 aa18.29■□□□□ 0.52
TRAFD1-209ENST00000552896 ATP10AO60312 1499 aa18.27■□□□□ 0.52
TRAFD1-209ENST00000552896 FGD6Q6ZV73 1430 aa18.27■□□□□ 0.52
TRAFD1-209ENST00000552896 ADRA2BP18089 450 aa18.27■□□□□ 0.52
TRAFD1-209ENST00000552896 AFAP1Q8N556 730 aa18.27■□□□□ 0.52
TRAFD1-209ENST00000552896 ADAMTSL3P82987 1691 aa18.27■□□□□ 0.52
TRAFD1-209ENST00000552896 TCOF1Q13428 1488 aaKnown RBP18.26■□□□□ 0.51
TRAFD1-209ENST00000552896 ZNF644Q9H582 1327 aaPredicted RBP18.26■□□□□ 0.51
TRAFD1-209ENST00000552896 MAST1Q9Y2H9 1570 aa18.26■□□□□ 0.51
TRAFD1-209ENST00000552896 DNMT1P26358 1616 aaKnown RBP18.26■□□□□ 0.51
TRAFD1-209ENST00000552896 PLXNC1O60486 1568 aa18.25■□□□□ 0.51
TRAFD1-209ENST00000552896 FER1L4A9Z1Z3 1794 aa18.23■□□□□ 0.51
TRAFD1-209ENST00000552896 HNRNPMP52272 730 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRAFD1-209ENST00000552896 AGLP35573 1532 aa18.22■□□□□ 0.51
TRAFD1-209ENST00000552896 RTEL1-TNFRSF6BF6WH68 1400 aa18.22■□□□□ 0.51
TRAFD1-209ENST00000552896 SHANK2Q9UPX8 1470 aa18.21■□□□□ 0.51
TRAFD1-209ENST00000552896 MADDQ8WXG6 1647 aa18.21■□□□□ 0.51
TRAFD1-209ENST00000552896 SPAG9O60271 1321 aaKnown RBP18.21■□□□□ 0.51
TRAFD1-209ENST00000552896 RSPH4AQ5TD94 716 aa18.18■□□□□ 0.5
TRAFD1-209ENST00000552896 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
TRAFD1-209ENST00000552896 KDM4FA0A1W2PPD8 638 aa18.16■□□□□ 0.5
TRAFD1-209ENST00000552896 A2MP01023 1474 aa18.15■□□□□ 0.5
TRAFD1-209ENST00000552896 MYT1LQ9UL68 1186 aa18.15■□□□□ 0.5
TRAFD1-209ENST00000552896 EIF2AK4Q9P2K8 1649 aaKnown RBP18.14■□□□□ 0.49
TRAFD1-209ENST00000552896 DAPK1P53355 1430 aa18.14■□□□□ 0.49
TRAFD1-209ENST00000552896 ARID4BQ4LE39 1312 aaPredicted RBP18.13■□□□□ 0.49
TRAFD1-209ENST00000552896 ABCC5O15440 1437 aa18.12■□□□□ 0.49
TRAFD1-209ENST00000552896 MROH2AA6NES4 1674 aa18.1■□□□□ 0.49
TRAFD1-209ENST00000552896 RNF17Q9BXT8 1623 aaKnown RBP18.09■□□□□ 0.49
TRAFD1-209ENST00000552896 DUOX2Q9NRD8 1548 aa18.08■□□□□ 0.48
TRAFD1-209ENST00000552896 ADGRL2O95490 1459 aa18.07■□□□□ 0.48
TRAFD1-209ENST00000552896 TSPY4P0CV99 314 aa18.07■□□□□ 0.48
TRAFD1-209ENST00000552896 TSPY10P0CW01 314 aa18.07■□□□□ 0.48
TRAFD1-209ENST00000552896 FAM135AQ9P2D6 1515 aa18.07■□□□□ 0.48
TRAFD1-209ENST00000552896 PTPRMP28827 1452 aa18.07■□□□□ 0.48
TRAFD1-209ENST00000552896 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
TRAFD1-209ENST00000552896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.48
TRAFD1-209ENST00000552896 DHX29Q7Z478 1369 aaKnown RBP18.05■□□□□ 0.48
TRAFD1-209ENST00000552896 CLTCQ00610 1675 aaKnown RBP18.05■□□□□ 0.48
TRAFD1-209ENST00000552896 C3P01024 1663 aa18.04■□□□□ 0.48
TRAFD1-209ENST00000552896 ZC3H13Q5T200 1668 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms