RNA–Protein interactions for RNA: ENST00000552866.5

RFX4-211, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 599 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-211ENST00000552866 KIF12Q96FN5 646 aa10.75□□□□□ -0.69
RFX4-211ENST00000552866 MKRN3Q13064 507 aaKnown RBP10.72□□□□□ -0.69
RFX4-211ENST00000552866 PPP1R15BQ5SWA1 713 aa10.7□□□□□ -0.7
RFX4-211ENST00000552866 C1orf115Q9H7X2 142 aa10.7□□□□□ -0.7
RFX4-211ENST00000552866 SPDYE16A6NNV3 312 aaPredicted RBP10.69□□□□□ -0.7
RFX4-211ENST00000552866 GPR37O15354 613 aa10.69□□□□□ -0.7
RFX4-211ENST00000552866 PDIA6Q15084 440 aa10.69□□□□□ -0.7
RFX4-211ENST00000552866 ARID3AQ99856 593 aa10.69□□□□□ -0.7
RFX4-211ENST00000552866 DDRGK1Q96HY6 314 aa10.68□□□□□ -0.7
RFX4-211ENST00000552866 FAM117AQ9C073 453 aa10.68□□□□□ -0.7
RFX4-211ENST00000552866 ZNF316A6NFI3 1004 aaPredicted RBP10.67□□□□□ -0.7
RFX4-211ENST00000552866 PRKAR2AP13861 404 aaKnown RBP10.67□□□□□ -0.7
RFX4-211ENST00000552866 GOLGA2Q08379 1002 aa10.66□□□□□ -0.7
RFX4-211ENST00000552866 FLIIQ13045 1269 aa10.66□□□□□ -0.7
RFX4-211ENST00000552866 DPYSL4O14531 572 aa10.65□□□□□ -0.7
RFX4-211ENST00000552866 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
RFX4-211ENST00000552866 MINK1Q8N4C8 1332 aaPredicted RBP10.64□□□□□ -0.71
RFX4-211ENST00000552866 PLEKHG3A1L390 1219 aa10.64□□□□□ -0.71
RFX4-211ENST00000552866 HRCP23327 699 aa10.64□□□□□ -0.71
RFX4-211ENST00000552866 EMILIN3Q9NT22 766 aa10.62□□□□□ -0.71
RFX4-211ENST00000552866 MAP2K5Q13163 448 aa10.61□□□□□ -0.71
RFX4-211ENST00000552866 AMHR2Q16671 573 aa10.61□□□□□ -0.71
RFX4-211ENST00000552866 CCDC102AQ96A19 550 aa10.6□□□□□ -0.71
RFX4-211ENST00000552866 ARID3CA6NKF2 412 aa10.59□□□□□ -0.71
RFX4-211ENST00000552866 APBB1O00213 710 aa10.59□□□□□ -0.71
RFX4-211ENST00000552866 PARP9Q8IXQ6 854 aa10.58□□□□□ -0.72
RFX4-211ENST00000552866 GOPCQ9HD26 462 aa10.58□□□□□ -0.72
RFX4-211ENST00000552866 NPM2Q86SE8 214 aaKnown RBP10.57□□□□□ -0.72
RFX4-211ENST00000552866 TMEM106CQ9BVX2 250 aa10.57□□□□□ -0.72
RFX4-211ENST00000552866 ONECUT3O60422 494 aaPredicted RBP10.56□□□□□ -0.72
RFX4-211ENST00000552866 IRF6O14896 467 aa10.55□□□□□ -0.72
RFX4-211ENST00000552866 FXR2P51116 673 aaKnown RBP eCLIP10.55□□□□□ -0.72
RFX4-211ENST00000552866 DSG2Q14126 1118 aa10.54□□□□□ -0.72
RFX4-211ENST00000552866 ILDR1Q86SU0 546 aaPredicted RBP10.54□□□□□ -0.72
RFX4-211ENST00000552866 A6NJR5 290 aa10.53□□□□□ -0.72
RFX4-211ENST00000552866 NUTM2FA1L443 756 aa10.51□□□□□ -0.73
RFX4-211ENST00000552866 GNPATO15228 680 aa10.51□□□□□ -0.73
RFX4-211ENST00000552866 PDIA4P13667 645 aaKnown RBP10.51□□□□□ -0.73
RFX4-211ENST00000552866 FOXK1P85037 733 aa10.51□□□□□ -0.73
RFX4-211ENST00000552866 ZRANB1Q9UGI0 708 aa10.5□□□□□ -0.73
RFX4-211ENST00000552866 ZBTB7CA1YPR0 619 aa10.49□□□□□ -0.73
RFX4-211ENST00000552866 HIC1Q14526 733 aa10.49□□□□□ -0.73
RFX4-211ENST00000552866 PHF12Q96QT6 1004 aa10.49□□□□□ -0.73
RFX4-211ENST00000552866 GRXCR2A6NFK2 248 aa10.48□□□□□ -0.73
RFX4-211ENST00000552866 CCDC82Q8N4S0 544 aa10.48□□□□□ -0.73
RFX4-211ENST00000552866 TRAK2O60296 914 aa10.47□□□□□ -0.73
RFX4-211ENST00000552866 TTLL12Q14166 644 aaPredicted RBP10.47□□□□□ -0.73
RFX4-211ENST00000552866 TMC2Q8TDI7 906 aa10.47□□□□□ -0.73
RFX4-211ENST00000552866 FCHSD2O94868 740 aa10.46□□□□□ -0.73
RFX4-211ENST00000552866 PCMTD1Q96MG8 357 aaPredicted RBP10.46□□□□□ -0.73
RFX4-211ENST00000552866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.46□□□□□ -0.73
RFX4-211ENST00000552866 CLUAP1Q96AJ1 413 aa10.45□□□□□ -0.74
RFX4-211ENST00000552866 OSBPP22059 807 aa10.44□□□□□ -0.74
RFX4-211ENST00000552866 TRPC6Q9Y210 931 aa10.44□□□□□ -0.74
RFX4-211ENST00000552866 CCDC9Q9Y3X0 531 aaKnown RBP10.44□□□□□ -0.74
RFX4-211ENST00000552866 CD44P16070 742 aaKnown RBP10.43□□□□□ -0.74
RFX4-211ENST00000552866 MICALL2Q8IY33 904 aa10.43□□□□□ -0.74
RFX4-211ENST00000552866 MCM6Q14566 821 aa10.42□□□□□ -0.74
RFX4-211ENST00000552866 GIGYF2Q6Y7W6 1299 aaKnown RBP10.42□□□□□ -0.74
RFX4-211ENST00000552866 PLPP6Q8IY26 295 aa10.42□□□□□ -0.74
RFX4-211ENST00000552866 FECHP22830 423 aa10.41□□□□□ -0.74
RFX4-211ENST00000552866 TIE1P35590 1138 aa10.41□□□□□ -0.74
RFX4-211ENST00000552866 MAP3K9P80192 1104 aa10.41□□□□□ -0.74
RFX4-211ENST00000552866 MS4A3Q96HJ5 214 aa10.41□□□□□ -0.74
RFX4-211ENST00000552866 MS4A1P11836 297 aa10.4□□□□□ -0.74
RFX4-211ENST00000552866 SH3D19Q5HYK7 790 aa10.4□□□□□ -0.74
RFX4-211ENST00000552866 PTGER2P43116 358 aa10.39□□□□□ -0.75
RFX4-211ENST00000552866 NECTIN2Q92692 538 aa10.38□□□□□ -0.75
RFX4-211ENST00000552866 TTLL13PA6NNM8 815 aa10.37□□□□□ -0.75
RFX4-211ENST00000552866 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
RFX4-211ENST00000552866 PIP4P2Q8N4L2 257 aa10.36□□□□□ -0.75
RFX4-211ENST00000552866 KIF3CO14782 793 aa10.35□□□□□ -0.75
RFX4-211ENST00000552866 PTGDRQ13258 359 aa10.35□□□□□ -0.75
RFX4-211ENST00000552866 C2orf72A6NCS6 295 aa10.34□□□□□ -0.75
RFX4-211ENST00000552866 DPY19L2Q6NUT2 758 aa10.34□□□□□ -0.75
RFX4-211ENST00000552866 OXER1Q8TDS5 423 aa10.33□□□□□ -0.76
RFX4-211ENST00000552866 REPIN1Q9BWE0 567 aaKnown RBP10.33□□□□□ -0.76
RFX4-211ENST00000552866 DDX12PQ92771 950 aa10.32□□□□□ -0.76
RFX4-211ENST00000552866 TRAIPQ9BWF2 469 aa10.32□□□□□ -0.76
RFX4-211ENST00000552866 CLCN1P35523 988 aa10.31□□□□□ -0.76
RFX4-211ENST00000552866 TMUB1Q9BVT8 246 aa10.31□□□□□ -0.76
RFX4-211ENST00000552866 TMEM121BQ9BXQ6 578 aaPredicted RBP10.31□□□□□ -0.76
RFX4-211ENST00000552866 SERPINA10Q9UK55 444 aa10.31□□□□□ -0.76
RFX4-211ENST00000552866 SKIV2LQ15477 1246 aaKnown RBP10.3□□□□□ -0.76
RFX4-211ENST00000552866 FNBP4Q8N3X1 1017 aaPredicted RBP10.3□□□□□ -0.76
RFX4-211ENST00000552866 PDCD7Q8N8D1 485 aaKnown RBP10.3□□□□□ -0.76
RFX4-211ENST00000552866 UPF1Q92900 1129 aaKnown RBP eCLIP10.3□□□□□ -0.76
RFX4-211ENST00000552866 CCDC97Q96F63 343 aaPredicted RBP10.3□□□□□ -0.76
RFX4-211ENST00000552866 BMP2KQ9NSY1 1161 aaPredicted RBP10.3□□□□□ -0.76
RFX4-211ENST00000552866 TRIM35Q9UPQ4 493 aa10.3□□□□□ -0.76
RFX4-211ENST00000552866 PRIM1P49642 420 aaKnown RBP10.29□□□□□ -0.76
RFX4-211ENST00000552866 RAD21O60216 631 aa10.28□□□□□ -0.76
RFX4-211ENST00000552866 KCTD17Q8N5Z5 321 aa10.28□□□□□ -0.76
RFX4-211ENST00000552866 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
RFX4-211ENST00000552866 ZNF777Q9ULD5 760 aaPredicted RBP10.28□□□□□ -0.76
RFX4-211ENST00000552866 CHRDL2Q6WN34 429 aa10.27□□□□□ -0.77
RFX4-211ENST00000552866 TBC1D12O60347 775 aa10.26□□□□□ -0.77
RFX4-211ENST00000552866 POM121Q96HA1 1249 aa10.26□□□□□ -0.77
RFX4-211ENST00000552866 BOLA1Q9Y3E2 137 aa10.26□□□□□ -0.77
RFX4-211ENST00000552866 SPDYE5A6NIY4 337 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms