RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.01□□□□□ -1.13
NPAS3-212ENST00000552696 TMEM92Q6UXU6 159 aa7.99□□□□□ -1.13
NPAS3-212ENST00000552696 OTUD5Q96G74 571 aa7.99□□□□□ -1.13
NPAS3-212ENST00000552696 SLAIN1Q8ND83 568 aa7.97□□□□□ -1.13
NPAS3-212ENST00000552696 PCDH10Q9P2E7 1040 aa7.97□□□□□ -1.13
NPAS3-212ENST00000552696 NCKAP5LQ9HCH0 1330 aa7.96□□□□□ -1.14
NPAS3-212ENST00000552696 C2orf72A6NCS6 295 aa7.95□□□□□ -1.14
NPAS3-212ENST00000552696 TMC2Q8TDI7 906 aa7.95□□□□□ -1.14
NPAS3-212ENST00000552696 CRISPLD2Q9H0B8 497 aa7.95□□□□□ -1.14
NPAS3-212ENST00000552696 POTEMA6NI47 508 aa7.94□□□□□ -1.14
NPAS3-212ENST00000552696 KIF3CO14782 793 aa7.94□□□□□ -1.14
NPAS3-212ENST00000552696 GPHNQ9NQX3 736 aaPredicted RBP7.92□□□□□ -1.14
NPAS3-212ENST00000552696 PDE4AP27815 886 aa7.91□□□□□ -1.14
NPAS3-212ENST00000552696 LARP6Q9BRS8 491 aaKnown RBP7.91□□□□□ -1.14
NPAS3-212ENST00000552696 POTEGQ6S5H5 508 aa7.9□□□□□ -1.14
NPAS3-212ENST00000552696 DSG2Q14126 1118 aa7.89□□□□□ -1.15
NPAS3-212ENST00000552696 MFSD10Q14728 455 aa7.89□□□□□ -1.15
NPAS3-212ENST00000552696 DDX27Q96GQ7 796 aaKnown RBP7.89□□□□□ -1.15
NPAS3-212ENST00000552696 FOXK1P85037 733 aa7.88□□□□□ -1.15
NPAS3-212ENST00000552696 PPP1R15BQ5SWA1 713 aa7.88□□□□□ -1.15
NPAS3-212ENST00000552696 SLC24A1O60721 1099 aa7.87□□□□□ -1.15
NPAS3-212ENST00000552696 PLPP6Q8IY26 295 aa7.86□□□□□ -1.15
NPAS3-212ENST00000552696 KDM2AQ9Y2K7 1162 aa7.86□□□□□ -1.15
NPAS3-212ENST00000552696 VSIG10Q8N0Z9 540 aa7.84□□□□□ -1.15
NPAS3-212ENST00000552696 WDR70Q9NW82 654 aa7.84□□□□□ -1.15
NPAS3-212ENST00000552696 HOXB3P14651 431 aaPredicted RBP7.83□□□□□ -1.16
NPAS3-212ENST00000552696 SNPHO15079 494 aa7.81□□□□□ -1.16
NPAS3-212ENST00000552696 DOK7Q18PE1 504 aa7.8□□□□□ -1.16
NPAS3-212ENST00000552696 CAMK2BQ13554 666 aa7.79□□□□□ -1.16
NPAS3-212ENST00000552696 E2F4Q16254 413 aa7.79□□□□□ -1.16
NPAS3-212ENST00000552696 UPF1Q92900 1129 aaKnown RBP eCLIP7.79□□□□□ -1.16
NPAS3-212ENST00000552696 EMILIN3Q9NT22 766 aa7.79□□□□□ -1.16
NPAS3-212ENST00000552696 SLC34A2O95436 690 aa7.78□□□□□ -1.16
NPAS3-212ENST00000552696 RIMBP2O15034 1052 aa7.77□□□□□ -1.17
NPAS3-212ENST00000552696 ZNF710Q8N1W2 664 aa7.77□□□□□ -1.17
NPAS3-212ENST00000552696 KCNV2Q8TDN2 545 aa7.77□□□□□ -1.17
NPAS3-212ENST00000552696 OXER1Q8TDS5 423 aa7.76□□□□□ -1.17
NPAS3-212ENST00000552696 PTCD2Q8WV60 388 aaKnown RBP7.75□□□□□ -1.17
NPAS3-212ENST00000552696 PCDHGA4Q9Y5G9 962 aa7.75□□□□□ -1.17
NPAS3-212ENST00000552696 DPYSL4O14531 572 aa7.74□□□□□ -1.17
NPAS3-212ENST00000552696 ST18O60284 1047 aa7.74□□□□□ -1.17
NPAS3-212ENST00000552696 P3H3Q8IVL6 736 aa7.74□□□□□ -1.17
NPAS3-212ENST00000552696 FAM163AQ96GL9 167 aaPredicted RBP7.74□□□□□ -1.17
NPAS3-212ENST00000552696 ZSWIM6Q9HCJ5 1215 aa7.74□□□□□ -1.17
NPAS3-212ENST00000552696 ARSIQ5FYB1 569 aa7.73□□□□□ -1.17
NPAS3-212ENST00000552696 LCE2DQ5TA82 110 aaPredicted RBP7.73□□□□□ -1.17
NPAS3-212ENST00000552696 KHSRPQ92945 711 aaKnown RBP eCLIP7.73□□□□□ -1.17
NPAS3-212ENST00000552696 GPR153Q6NV75 609 aa7.72□□□□□ -1.17
NPAS3-212ENST00000552696 HOXB1P14653 301 aaPredicted RBP7.71□□□□□ -1.18
NPAS3-212ENST00000552696 MAP3K9P80192 1104 aa7.71□□□□□ -1.18
NPAS3-212ENST00000552696 TBC1D12O60347 775 aa7.7□□□□□ -1.18
NPAS3-212ENST00000552696 NUDT7P0C024 238 aa7.7□□□□□ -1.18
NPAS3-212ENST00000552696 ARIH1Q9Y4X5 557 aaPredicted RBP7.7□□□□□ -1.18
NPAS3-212ENST00000552696 ARHGEF1Q92888 912 aaKnown RBP7.69□□□□□ -1.18
NPAS3-212ENST00000552696 MARVELD3Q96A59 401 aa7.68□□□□□ -1.18
NPAS3-212ENST00000552696 KDM4FA0A1W2PPD8 638 aa7.67□□□□□ -1.18
NPAS3-212ENST00000552696 ZNF316A6NFI3 1004 aaPredicted RBP7.67□□□□□ -1.18
NPAS3-212ENST00000552696 EVI5O60447 810 aa7.67□□□□□ -1.18
NPAS3-212ENST00000552696 PDIA6Q15084 440 aa7.67□□□□□ -1.18
NPAS3-212ENST00000552696 EMP3P54852 163 aa7.66□□□□□ -1.18
NPAS3-212ENST00000552696 SPDYE16A6NNV3 312 aaPredicted RBP7.64□□□□□ -1.19
NPAS3-212ENST00000552696 LHX6Q9UPM6 363 aa7.64□□□□□ -1.19
NPAS3-212ENST00000552696 ANO8Q9HCE9 1232 aaPredicted RBP7.62□□□□□ -1.19
NPAS3-212ENST00000552696 ERBB3P21860 1342 aa7.61□□□□□ -1.19
NPAS3-212ENST00000552696 FAM205CA6NFA0 338 aa7.61□□□□□ -1.19
NPAS3-212ENST00000552696 SEMA3EO15041 775 aa7.6□□□□□ -1.19
NPAS3-212ENST00000552696 VARS2Q5ST30 1063 aaKnown RBP7.6□□□□□ -1.19
NPAS3-212ENST00000552696 DDX12PQ92771 950 aa7.6□□□□□ -1.19
NPAS3-212ENST00000552696 ZNF454Q8N9F8 522 aa7.59□□□□□ -1.19
NPAS3-212ENST00000552696 JPH4Q96JJ6 628 aa7.59□□□□□ -1.19
NPAS3-212ENST00000552696 HS3ST6Q96QI5 342 aa7.59□□□□□ -1.19
NPAS3-212ENST00000552696 POTEB3A0JP26 581 aa7.58□□□□□ -1.2
NPAS3-212ENST00000552696 MLLT3P42568 568 aaPredicted RBP7.58□□□□□ -1.2
NPAS3-212ENST00000552696 PTGER2P43116 358 aa7.58□□□□□ -1.2
NPAS3-212ENST00000552696 FOSBP53539 338 aa7.58□□□□□ -1.2
NPAS3-212ENST00000552696 NBR1Q14596 966 aa7.58□□□□□ -1.2
NPAS3-212ENST00000552696 POTEBQ6S5H4 581 aa7.58□□□□□ -1.2
NPAS3-212ENST00000552696 PSDA5PKW4 1024 aaPredicted RBP7.57□□□□□ -1.2
NPAS3-212ENST00000552696 GRXCR2A6NFK2 248 aa7.57□□□□□ -1.2
NPAS3-212ENST00000552696 TESPA1A2RU30 521 aaPredicted RBP7.56□□□□□ -1.2
NPAS3-212ENST00000552696 PHF14O94880 888 aa7.56□□□□□ -1.2
NPAS3-212ENST00000552696 PPP4R3BQ5MIZ7 849 aa7.56□□□□□ -1.2
NPAS3-212ENST00000552696 PCDHGA10Q9Y5H3 936 aa7.56□□□□□ -1.2
NPAS3-212ENST00000552696 TYW1BQ6NUM6 668 aa7.53□□□□□ -1.2
NPAS3-212ENST00000552696 ZDHHC16Q969W1 377 aa7.53□□□□□ -1.2
NPAS3-212ENST00000552696 EPAS1Q99814 870 aa7.53□□□□□ -1.2
NPAS3-212ENST00000552696 OSBPP22059 807 aa7.52□□□□□ -1.21
NPAS3-212ENST00000552696 PRIM1P49642 420 aaKnown RBP7.52□□□□□ -1.21
NPAS3-212ENST00000552696 CDAN1Q8IWY9 1227 aa7.52□□□□□ -1.21
NPAS3-212ENST00000552696 FBXW7Q969H0 707 aa7.52□□□□□ -1.21
NPAS3-212ENST00000552696 RBM33Q96EV2 1170 aaKnown RBP7.52□□□□□ -1.21
NPAS3-212ENST00000552696 ADAM33Q9BZ11 813 aa7.52□□□□□ -1.21
NPAS3-212ENST00000552696 EN1Q05925 392 aaPredicted RBP7.51□□□□□ -1.21
NPAS3-212ENST00000552696 ZNF687Q8N1G0 1237 aa7.51□□□□□ -1.21
NPAS3-212ENST00000552696 MAP3K7O43318 606 aa7.5□□□□□ -1.21
NPAS3-212ENST00000552696 BCANQ96GW7 911 aa7.5□□□□□ -1.21
NPAS3-212ENST00000552696 BCL2L12Q9HB09 334 aa7.5□□□□□ -1.21
NPAS3-212ENST00000552696 SMYD5Q6GMV2 418 aa7.49□□□□□ -1.21
NPAS3-212ENST00000552696 POTEEQ6S8J3 1075 aa7.49□□□□□ -1.21
NPAS3-212ENST00000552696 KCNK17Q96T54 332 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms