RNA–Protein interactions for RNA: ENST00000552583.1

ITGA5-212, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-212ENST00000552583 CDC42BPBQ9Y5S2 1711 aa22.77■■□□□ 1.24
ITGA5-212ENST00000552583 POGZQ7Z3K3 1410 aa22.77■■□□□ 1.24
ITGA5-212ENST00000552583 EFCAB2Q5VUJ9 269 aa22.77■■□□□ 1.24
ITGA5-212ENST00000552583 MAGI2Q86UL8 1455 aa22.77■■□□□ 1.24
ITGA5-212ENST00000552583 CDC42BPAQ5VT25 1732 aa22.75■■□□□ 1.23
ITGA5-212ENST00000552583 EHBP1L1Q8N3D4 1523 aa22.74■■□□□ 1.23
ITGA5-212ENST00000552583 SCAPERQ9BY12 1400 aa22.74■■□□□ 1.23
ITGA5-212ENST00000552583 ZNF518AQ6AHZ1 1483 aa22.72■■□□□ 1.23
ITGA5-212ENST00000552583 ZFYVE16Q7Z3T8 1539 aa22.72■■□□□ 1.23
ITGA5-212ENST00000552583 MTUS2Q5JR59 1369 aa22.7■■□□□ 1.22
ITGA5-212ENST00000552583 ABCC1P33527 1531 aa22.7■■□□□ 1.22
ITGA5-212ENST00000552583 KDM5CP41229 1560 aa22.69■■□□□ 1.22
ITGA5-212ENST00000552583 VPS8Q8N3P4 1428 aa22.69■■□□□ 1.22
ITGA5-212ENST00000552583 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
ITGA5-212ENST00000552583 ITSN2Q9NZM3 1697 aa22.67■■□□□ 1.22
ITGA5-212ENST00000552583 BCORL1Q5H9F3 1711 aa22.65■■□□□ 1.22
ITGA5-212ENST00000552583 ADAMTSL3P82987 1691 aa22.65■■□□□ 1.22
ITGA5-212ENST00000552583 HECW2Q9P2P5 1572 aa22.64■■□□□ 1.22
ITGA5-212ENST00000552583 TIAM1Q13009 1591 aa22.63■■□□□ 1.21
ITGA5-212ENST00000552583 GPATCH8Q9UKJ3 1502 aaKnown RBP22.63■■□□□ 1.21
ITGA5-212ENST00000552583 SUPT6HQ7KZ85 1726 aaKnown RBP22.61■■□□□ 1.21
ITGA5-212ENST00000552583 YEATS2Q9ULM3 1422 aa22.61■■□□□ 1.21
ITGA5-212ENST00000552583 PLEKHH2Q8IVE3 1493 aa22.6■■□□□ 1.21
ITGA5-212ENST00000552583 SAMD9LQ8IVG5 1584 aa22.6■■□□□ 1.21
ITGA5-212ENST00000552583 MAP3K1Q13233 1512 aa22.6■■□□□ 1.21
ITGA5-212ENST00000552583 CCNB3Q8WWL7 1395 aa22.6■■□□□ 1.21
ITGA5-212ENST00000552583 MLH3Q9UHC1 1453 aa22.58■■□□□ 1.2
ITGA5-212ENST00000552583 C9orf84Q5VXU9 1444 aa22.57■■□□□ 1.2
ITGA5-212ENST00000552583 ATP10AO60312 1499 aa22.57■■□□□ 1.2
ITGA5-212ENST00000552583 REREQ9P2R6 1566 aa22.57■■□□□ 1.2
ITGA5-212ENST00000552583 ARHGEF12Q9NZN5 1544 aa22.56■■□□□ 1.2
ITGA5-212ENST00000552583 KIAA1107Q9UPP5 1409 aa22.56■■□□□ 1.2
ITGA5-212ENST00000552583 SYCP2Q9BX26 1530 aa22.55■■□□□ 1.2
ITGA5-212ENST00000552583 DIP2CQ9Y2E4 1556 aa22.54■■□□□ 1.2
ITGA5-212ENST00000552583 MADDQ8WXG6 1647 aa22.53■■□□□ 1.2
ITGA5-212ENST00000552583 TRAPPC8Q9Y2L5 1435 aa22.53■■□□□ 1.2
ITGA5-212ENST00000552583 SIGLEC1Q9BZZ2 1709 aa22.53■■□□□ 1.2
ITGA5-212ENST00000552583 ARID4BQ4LE39 1312 aaPredicted RBP22.53■■□□□ 1.2
ITGA5-212ENST00000552583 CFDP1Q9UEE9 299 aaPredicted RBP22.52■■□□□ 1.2
ITGA5-212ENST00000552583 ABCA6Q8N139 1617 aa22.52■■□□□ 1.2
ITGA5-212ENST00000552583 NCOA2Q15596 1464 aa22.52■■□□□ 1.2
ITGA5-212ENST00000552583 LRRC9Q6ZRR7 1453 aa22.51■■□□□ 1.19
ITGA5-212ENST00000552583 AFAP1Q8N556 730 aa22.5■■□□□ 1.19
ITGA5-212ENST00000552583 KIDINS220Q9ULH0 1771 aa22.5■■□□□ 1.19
ITGA5-212ENST00000552583 PTPRMP28827 1452 aa22.48■■□□□ 1.19
ITGA5-212ENST00000552583 FER1L4A9Z1Z3 1794 aa22.47■■□□□ 1.19
ITGA5-212ENST00000552583 RIMS1Q86UR5 1692 aaKnown RBP22.46■■□□□ 1.19
ITGA5-212ENST00000552583 ZNF777Q9ULD5 760 aaPredicted RBP22.46■■□□□ 1.19
ITGA5-212ENST00000552583 AGLP35573 1532 aa22.46■■□□□ 1.19
ITGA5-212ENST00000552583 INO80Q9ULG1 1556 aaPredicted RBP22.46■■□□□ 1.19
ITGA5-212ENST00000552583 ATP7AQ04656 1500 aa22.43■■□□□ 1.18
ITGA5-212ENST00000552583 MYT1LQ9UL68 1186 aa22.42■■□□□ 1.18
ITGA5-212ENST00000552583 SPAG9O60271 1321 aaKnown RBP22.39■■□□□ 1.18
ITGA5-212ENST00000552583 CAMSAP2Q08AD1 1489 aa22.39■■□□□ 1.17
ITGA5-212ENST00000552583 MBD5Q9P267 1494 aa22.39■■□□□ 1.17
ITGA5-212ENST00000552583 ADGBQ8N7X0 1667 aa22.37■■□□□ 1.17
ITGA5-212ENST00000552583 HNRNPMP52272 730 aaKnown RBP eCLIP22.37■■□□□ 1.17
ITGA5-212ENST00000552583 ARHGEF5Q12774 1597 aa22.37■■□□□ 1.17
ITGA5-212ENST00000552583 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
ITGA5-212ENST00000552583 APLP2Q06481 763 aa22.36■■□□□ 1.17
ITGA5-212ENST00000552583 PLXNC1O60486 1568 aa22.36■■□□□ 1.17
ITGA5-212ENST00000552583 RTEL1-TNFRSF6BF6WH68 1400 aa22.34■■□□□ 1.17
ITGA5-212ENST00000552583 MIA2Q96PC5 1412 aa22.34■■□□□ 1.17
ITGA5-212ENST00000552583 MYOM3Q5VTT5 1437 aa22.33■■□□□ 1.17
ITGA5-212ENST00000552583 RSPH4AQ5TD94 716 aa22.33■■□□□ 1.17
ITGA5-212ENST00000552583 ZNF644Q9H582 1327 aaPredicted RBP22.31■■□□□ 1.16
ITGA5-212ENST00000552583 A2MP01023 1474 aa22.3■■□□□ 1.16
ITGA5-212ENST00000552583 MLECQ14165 292 aa22.3■■□□□ 1.16
ITGA5-212ENST00000552583 KANK4Q5T7N3 995 aaPredicted RBP22.3■■□□□ 1.16
ITGA5-212ENST00000552583 CNTLNQ9NXG0 1405 aa22.28■■□□□ 1.16
ITGA5-212ENST00000552583 MROH2AA6NES4 1674 aa22.26■■□□□ 1.15
ITGA5-212ENST00000552583 MAST1Q9Y2H9 1570 aa22.25■■□□□ 1.15
ITGA5-212ENST00000552583 LMTK3Q96Q04 1460 aa22.23■■□□□ 1.15
ITGA5-212ENST00000552583 PREX1Q8TCU6 1659 aa22.23■■□□□ 1.15
ITGA5-212ENST00000552583 C3P01024 1663 aa22.22■■□□□ 1.15
ITGA5-212ENST00000552583 FAM135AQ9P2D6 1515 aa22.21■■□□□ 1.15
ITGA5-212ENST00000552583 PTPN23Q9H3S7 1636 aa22.2■■□□□ 1.15
ITGA5-212ENST00000552583 ESF1Q9H501 851 aaKnown RBP22.2■■□□□ 1.14
ITGA5-212ENST00000552583 SETD1BQ9UPS6 1966 aaKnown RBP22.18■■□□□ 1.14
ITGA5-212ENST00000552583 CROCC2H7BZ55 1655 aa22.18■■□□□ 1.14
ITGA5-212ENST00000552583 DHX29Q7Z478 1369 aaKnown RBP22.18■■□□□ 1.14
ITGA5-212ENST00000552583 TSPY4P0CV99 314 aa22.18■■□□□ 1.14
ITGA5-212ENST00000552583 TSPY10P0CW01 314 aa22.18■■□□□ 1.14
ITGA5-212ENST00000552583 SHANK2Q9UPX8 1470 aa22.17■■□□□ 1.14
ITGA5-212ENST00000552583 FGD6Q6ZV73 1430 aa22.17■■□□□ 1.14
ITGA5-212ENST00000552583 TCOF1Q13428 1488 aaKnown RBP22.16■■□□□ 1.14
ITGA5-212ENST00000552583 PPP6R1Q9UPN7 881 aa22.16■■□□□ 1.14
ITGA5-212ENST00000552583 CLTCQ00610 1675 aaKnown RBP22.14■■□□□ 1.13
ITGA5-212ENST00000552583 DNMT1P26358 1616 aaKnown RBP22.13■■□□□ 1.13
ITGA5-212ENST00000552583 EIF2AK4Q9P2K8 1649 aaKnown RBP22.13■■□□□ 1.13
ITGA5-212ENST00000552583 NPATQ14207 1427 aa22.12■■□□□ 1.13
ITGA5-212ENST00000552583 UHRF1BP1Q6BDS2 1440 aa22.1■■□□□ 1.13
ITGA5-212ENST00000552583 RNF17Q9BXT8 1623 aaKnown RBP22.09■■□□□ 1.13
ITGA5-212ENST00000552583 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
ITGA5-212ENST00000552583 KDM5DQ9BY66 1539 aa22.08■■□□□ 1.13
ITGA5-212ENST00000552583 DUOX2Q9NRD8 1548 aa22.07■■□□□ 1.12
ITGA5-212ENST00000552583 ABCC5O15440 1437 aa22.06■■□□□ 1.12
ITGA5-212ENST00000552583 DAPK1P53355 1430 aa22.06■■□□□ 1.12
ITGA5-212ENST00000552583 CEBPAP49715 358 aaPredicted RBP22.06■■□□□ 1.12
ITGA5-212ENST00000552583 ZMYM3Q14202 1370 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms