RNA–Protein interactions for RNA: ENST00000552449.1

LMBR1L-226, Transcript of limb development membrane protein 1 like, humanhuman

TSL 3

Gene LMBR1L, Length 277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-226ENST00000552449 CLIP1P30622 1438 aa12.43□□□□□ -0.42
LMBR1L-226ENST00000552449 CASKIN1Q8WXD9 1431 aa12.43□□□□□ -0.42
LMBR1L-226ENST00000552449 PCF11O94913 1555 aaKnown RBP12.43□□□□□ -0.42
LMBR1L-226ENST00000552449 CDC42BPBQ9Y5S2 1711 aa12.42□□□□□ -0.42
LMBR1L-226ENST00000552449 SCAPERQ9BY12 1400 aa12.42□□□□□ -0.42
LMBR1L-226ENST00000552449 RIMS1Q86UR5 1692 aaKnown RBP12.42□□□□□ -0.42
LMBR1L-226ENST00000552449 PREX2Q70Z35 1606 aa12.41□□□□□ -0.42
LMBR1L-226ENST00000552449 KDM5CP41229 1560 aa12.41□□□□□ -0.42
LMBR1L-226ENST00000552449 YEATS2Q9ULM3 1422 aa12.41□□□□□ -0.42
LMBR1L-226ENST00000552449 ZNF518AQ6AHZ1 1483 aa12.4□□□□□ -0.42
LMBR1L-226ENST00000552449 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.42
LMBR1L-226ENST00000552449 EFCAB2Q5VUJ9 269 aa12.4□□□□□ -0.42
LMBR1L-226ENST00000552449 FER1L4A9Z1Z3 1794 aa12.39□□□□□ -0.43
LMBR1L-226ENST00000552449 ARHGAP5Q13017 1502 aa12.39□□□□□ -0.43
LMBR1L-226ENST00000552449 ARID4BQ4LE39 1312 aaPredicted RBP12.38□□□□□ -0.43
LMBR1L-226ENST00000552449 EHMT2Q96KQ7 1210 aa12.38□□□□□ -0.43
LMBR1L-226ENST00000552449 ATP1B4Q9UN42 357 aaPredicted RBP12.38□□□□□ -0.43
LMBR1L-226ENST00000552449 REREQ9P2R6 1566 aa12.38□□□□□ -0.43
LMBR1L-226ENST00000552449 CDC42BPAQ5VT25 1732 aa12.37□□□□□ -0.43
LMBR1L-226ENST00000552449 ATP10AO60312 1499 aa12.37□□□□□ -0.43
LMBR1L-226ENST00000552449 C9orf84Q5VXU9 1444 aa12.37□□□□□ -0.43
LMBR1L-226ENST00000552449 ITSN2Q9NZM3 1697 aa12.36□□□□□ -0.43
LMBR1L-226ENST00000552449 ARHGEF12Q9NZN5 1544 aa12.36□□□□□ -0.43
LMBR1L-226ENST00000552449 LMTK3Q96Q04 1460 aa12.35□□□□□ -0.43
LMBR1L-226ENST00000552449 ABCC1P33527 1531 aa12.35□□□□□ -0.43
LMBR1L-226ENST00000552449 DIP2CQ9Y2E4 1556 aa12.34□□□□□ -0.43
LMBR1L-226ENST00000552449 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
LMBR1L-226ENST00000552449 ABCA6Q8N139 1617 aa12.32□□□□□ -0.44
LMBR1L-226ENST00000552449 SETD1BQ9UPS6 1966 aaKnown RBP12.31□□□□□ -0.44
LMBR1L-226ENST00000552449 ILDR1Q86SU0 546 aaPredicted RBP12.31□□□□□ -0.44
LMBR1L-226ENST00000552449 KIDINS220Q9ULH0 1771 aa12.3□□□□□ -0.44
LMBR1L-226ENST00000552449 PREX1Q8TCU6 1659 aa12.3□□□□□ -0.44
LMBR1L-226ENST00000552449 AGLP35573 1532 aa12.3□□□□□ -0.44
LMBR1L-226ENST00000552449 SAMD9LQ8IVG5 1584 aa12.28□□□□□ -0.44
LMBR1L-226ENST00000552449 AFAP1Q8N556 730 aa12.28□□□□□ -0.44
LMBR1L-226ENST00000552449 TRAPPC8Q9Y2L5 1435 aa12.28□□□□□ -0.44
LMBR1L-226ENST00000552449 GPATCH8Q9UKJ3 1502 aaKnown RBP12.27□□□□□ -0.45
LMBR1L-226ENST00000552449 PLEKHH2Q8IVE3 1493 aa12.26□□□□□ -0.45
LMBR1L-226ENST00000552449 KIAA1107Q9UPP5 1409 aa12.25□□□□□ -0.45
LMBR1L-226ENST00000552449 C3P01024 1663 aa12.24□□□□□ -0.45
LMBR1L-226ENST00000552449 EHBP1L1Q8N3D4 1523 aa12.24□□□□□ -0.45
LMBR1L-226ENST00000552449 SYCP2Q9BX26 1530 aa12.24□□□□□ -0.45
LMBR1L-226ENST00000552449 INO80Q9ULG1 1556 aaPredicted RBP12.24□□□□□ -0.45
LMBR1L-226ENST00000552449 MROH2AA6NES4 1674 aa12.23□□□□□ -0.45
LMBR1L-226ENST00000552449 MLECQ14165 292 aa12.23□□□□□ -0.45
LMBR1L-226ENST00000552449 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
LMBR1L-226ENST00000552449 ATP7AQ04656 1500 aa12.21□□□□□ -0.45
LMBR1L-226ENST00000552449 CEP162Q5TB80 1403 aa12.21□□□□□ -0.45
LMBR1L-226ENST00000552449 CNTLNQ9NXG0 1405 aa12.21□□□□□ -0.45
LMBR1L-226ENST00000552449 MTUS2Q5JR59 1369 aa12.21□□□□□ -0.45
LMBR1L-226ENST00000552449 PLXNC1O60486 1568 aa12.21□□□□□ -0.46
LMBR1L-226ENST00000552449 CCNB3Q8WWL7 1395 aa12.2□□□□□ -0.46
LMBR1L-226ENST00000552449 ADGBQ8N7X0 1667 aa12.2□□□□□ -0.46
LMBR1L-226ENST00000552449 FBXO41Q8TF61 875 aa12.2□□□□□ -0.46
LMBR1L-226ENST00000552449 MYT1LQ9UL68 1186 aa12.19□□□□□ -0.46
LMBR1L-226ENST00000552449 STRCQ7RTU9 1775 aa12.19□□□□□ -0.46
LMBR1L-226ENST00000552449 SUPT6HQ7KZ85 1726 aaKnown RBP12.18□□□□□ -0.46
LMBR1L-226ENST00000552449 HSPA2P54652 639 aa12.18□□□□□ -0.46
LMBR1L-226ENST00000552449 UHRF1BP1Q6BDS2 1440 aa12.18□□□□□ -0.46
LMBR1L-226ENST00000552449 SPAG9O60271 1321 aaKnown RBP12.17□□□□□ -0.46
LMBR1L-226ENST00000552449 CFDP1Q9UEE9 299 aaPredicted RBP12.17□□□□□ -0.46
LMBR1L-226ENST00000552449 MBD5Q9P267 1494 aa12.15□□□□□ -0.46
LMBR1L-226ENST00000552449 NPATQ14207 1427 aa12.15□□□□□ -0.46
LMBR1L-226ENST00000552449 CEBPAP49715 358 aaPredicted RBP12.15□□□□□ -0.46
LMBR1L-226ENST00000552449 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.46
LMBR1L-226ENST00000552449 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
LMBR1L-226ENST00000552449 A2MP01023 1474 aa12.14□□□□□ -0.47
LMBR1L-226ENST00000552449 RTEL1-TNFRSF6BF6WH68 1400 aa12.14□□□□□ -0.47
LMBR1L-226ENST00000552449 PLPPR3Q6T4P5 718 aa12.14□□□□□ -0.47
LMBR1L-226ENST00000552449 CLTCQ00610 1675 aaKnown RBP12.13□□□□□ -0.47
LMBR1L-226ENST00000552449 ESF1Q9H501 851 aaKnown RBP12.13□□□□□ -0.47
LMBR1L-226ENST00000552449 ZNF142P52746 1687 aaPredicted RBP12.13□□□□□ -0.47
LMBR1L-226ENST00000552449 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
LMBR1L-226ENST00000552449 NCOA2Q15596 1464 aa12.12□□□□□ -0.47
LMBR1L-226ENST00000552449 FAM135AQ9P2D6 1515 aa12.11□□□□□ -0.47
LMBR1L-226ENST00000552449 ARHGEF5Q12774 1597 aa12.11□□□□□ -0.47
LMBR1L-226ENST00000552449 PPP6R1Q9UPN7 881 aa12.11□□□□□ -0.47
LMBR1L-226ENST00000552449 MAP3K1Q13233 1512 aa12.11□□□□□ -0.47
LMBR1L-226ENST00000552449 PTPRTO14522 1441 aa12.11□□□□□ -0.47
LMBR1L-226ENST00000552449 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
LMBR1L-226ENST00000552449 CCDC141Q6ZP82 1450 aa12.1□□□□□ -0.47
LMBR1L-226ENST00000552449 CAMSAP2Q08AD1 1489 aa12.09□□□□□ -0.47
LMBR1L-226ENST00000552449 ZMYM3Q14202 1370 aa12.09□□□□□ -0.47
LMBR1L-226ENST00000552449 MYO3AQ8NEV4 1616 aa12.09□□□□□ -0.47
LMBR1L-226ENST00000552449 ZNF644Q9H582 1327 aaPredicted RBP12.09□□□□□ -0.47
LMBR1L-226ENST00000552449 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
LMBR1L-226ENST00000552449 NCOA1Q15788 1441 aa12.08□□□□□ -0.48
LMBR1L-226ENST00000552449 LRRC9Q6ZRR7 1453 aa12.08□□□□□ -0.48
LMBR1L-226ENST00000552449 DHX29Q7Z478 1369 aaKnown RBP12.07□□□□□ -0.48
LMBR1L-226ENST00000552449 CERKQ8TCT0 537 aa12.07□□□□□ -0.48
LMBR1L-226ENST00000552449 PTPRKQ15262 1439 aa12.06□□□□□ -0.48
LMBR1L-226ENST00000552449 MAST1Q9Y2H9 1570 aa12.05□□□□□ -0.48
LMBR1L-226ENST00000552449 CEP170BQ9Y4F5 1589 aaPredicted RBP12.05□□□□□ -0.48
LMBR1L-226ENST00000552449 CAMSAP1Q5T5Y3 1602 aa12.05□□□□□ -0.48
LMBR1L-226ENST00000552449 PLA2R1Q13018 1463 aa12.05□□□□□ -0.48
LMBR1L-226ENST00000552449 IQSEC2Q5JU85 1478 aa12.04□□□□□ -0.48
LMBR1L-226ENST00000552449 KDM5DQ9BY66 1539 aa12.04□□□□□ -0.48
LMBR1L-226ENST00000552449 LTBP4Q8N2S1 1624 aa12.03□□□□□ -0.48
LMBR1L-226ENST00000552449 RNF17Q9BXT8 1623 aaKnown RBP12.03□□□□□ -0.48
LMBR1L-226ENST00000552449 MIA2Q96PC5 1412 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms